RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.97■■□□□ 1.75
VPS16-204ENST00000417508 TESK2Q96S53 571 aa25.96■■□□□ 1.75
VPS16-204ENST00000417508 CDCA7Q9BWT1 371 aaPredicted RBP25.96■■□□□ 1.75
VPS16-204ENST00000417508 CD163L1Q9NR16 1453 aa25.96■■□□□ 1.75
VPS16-204ENST00000417508 NINLQ9Y2I6 1382 aa25.95■■□□□ 1.74
VPS16-204ENST00000417508 PARP4Q9UKK3 1724 aaKnown RBP25.94■■□□□ 1.74
VPS16-204ENST00000417508 SOX12O15370 315 aa25.94■■□□□ 1.74
VPS16-204ENST00000417508 TIMELESSQ9UNS1 1208 aa25.94■■□□□ 1.74
VPS16-204ENST00000417508 APBA3O96018 575 aa25.93■■□□□ 1.74
VPS16-204ENST00000417508 CARD10Q9BWT7 1032 aa25.93■■□□□ 1.74
VPS16-204ENST00000417508 EDC4Q6P2E9 1401 aaKnown RBP25.93■■□□□ 1.74
VPS16-204ENST00000417508 TNS1Q9HBL0 1735 aaKnown RBP25.92■■□□□ 1.74
VPS16-204ENST00000417508 CAMKK2Q96RR4 588 aa25.92■■□□□ 1.74
VPS16-204ENST00000417508 NFAT5O94916 1531 aa25.92■■□□□ 1.74
VPS16-204ENST00000417508 ABCC6O95255 1503 aa25.92■■□□□ 1.74
VPS16-204ENST00000417508 PARD3Q8TEW0 1356 aa25.92■■□□□ 1.74
VPS16-204ENST00000417508 CSB-PGBD3P0DP91 1061 aa25.91■■□□□ 1.74
VPS16-204ENST00000417508 DDB1Q16531 1140 aa25.91■■□□□ 1.74
VPS16-204ENST00000417508 NME9Q86XW9 330 aa25.91■■□□□ 1.74
VPS16-204ENST00000417508 USP54Q70EL1 1684 aa25.9■■□□□ 1.74
VPS16-204ENST00000417508 RGPD5Q99666 1765 aa25.9■■□□□ 1.74
VPS16-204ENST00000417508 EZH2Q15910 746 aaKnown RBP25.89■■□□□ 1.74
VPS16-204ENST00000417508 CLSPNQ9HAW4 1339 aa25.88■■□□□ 1.73
VPS16-204ENST00000417508 A0A1W2PP64 1363 aa25.88■■□□□ 1.73
VPS16-204ENST00000417508 CCDC7Q96M83 1385 aa25.86■■□□□ 1.73
VPS16-204ENST00000417508 OVOS2A0A0G2JMS6 1433 aa25.86■■□□□ 1.73
VPS16-204ENST00000417508 OVOS2A0A0J9YW53 1432 aa25.86■■□□□ 1.73
VPS16-204ENST00000417508 OVOS2Q6IE36 1432 aa25.86■■□□□ 1.73
VPS16-204ENST00000417508 TMF1P82094 1093 aa25.85■■□□□ 1.73
VPS16-204ENST00000417508 PSDA5PKW4 1024 aaPredicted RBP25.84■■□□□ 1.73
VPS16-204ENST00000417508 EXOC5O00471 708 aa25.83■■□□□ 1.73
VPS16-204ENST00000417508 USP47Q96K76 1375 aa25.82■■□□□ 1.72
VPS16-204ENST00000417508 CDCA8Q53HL2 280 aa25.82■■□□□ 1.72
VPS16-204ENST00000417508 SRCAPQ6ZRS2 3230 aa25.82■■□□□ 1.72
VPS16-204ENST00000417508 ERBB3P21860 1342 aa25.81■■□□□ 1.72
VPS16-204ENST00000417508 LRRC37A3O60309 1634 aa25.81■■□□□ 1.72
VPS16-204ENST00000417508 BCL9O00512 1426 aa25.8■■□□□ 1.72
VPS16-204ENST00000417508 WNK3Q9BYP7 1800 aa25.8■■□□□ 1.72
VPS16-204ENST00000417508 PEAK1Q9H792 1746 aa25.8■■□□□ 1.72
VPS16-204ENST00000417508 PLSCR1O15162 318 aa25.79■■□□□ 1.72
VPS16-204ENST00000417508 R3HDM1Q15032 1099 aaKnown RBP25.79■■□□□ 1.72
VPS16-204ENST00000417508 NBPF14Q5TI25 921 aa25.79■■□□□ 1.72
VPS16-204ENST00000417508 MARCH10Q8NA82 808 aaPredicted RBP25.79■■□□□ 1.72
VPS16-204ENST00000417508 COG3Q96JB2 828 aa25.79■■□□□ 1.72
VPS16-204ENST00000417508 BCL11BQ9C0K0 894 aaPredicted RBP25.79■■□□□ 1.72
VPS16-204ENST00000417508 ANKRD36BQ8N2N9 1353 aa25.79■■□□□ 1.72
VPS16-204ENST00000417508 LTN1O94822 1766 aa25.78■■□□□ 1.72
VPS16-204ENST00000417508 NLRP2Q9NX02 1062 aa25.78■■□□□ 1.72
VPS16-204ENST00000417508 SBF2Q86WG5 1849 aa25.77■■□□□ 1.72
VPS16-204ENST00000417508 PCGF6Q9BYE7 350 aa25.77■■□□□ 1.72
VPS16-204ENST00000417508 LRP5O75197 1615 aa25.77■■□□□ 1.72
VPS16-204ENST00000417508 ANKRD24Q8TF21 1146 aa25.76■■□□□ 1.71
VPS16-204ENST00000417508 IP6K1Q92551 441 aa25.76■■□□□ 1.71
VPS16-204ENST00000417508 RREB1Q92766 1687 aa25.74■■□□□ 1.71
VPS16-204ENST00000417508 IL2RBP14784 551 aa25.73■■□□□ 1.71
VPS16-204ENST00000417508 RGPD3A6NKT7 1758 aaPredicted RBP25.69■■□□□ 1.7
VPS16-204ENST00000417508 RGPD4Q7Z3J3 1758 aa25.69■■□□□ 1.7
VPS16-204ENST00000417508 FYB1O15117 783 aa25.69■■□□□ 1.7
VPS16-204ENST00000417508 TNS2Q63HR2 1409 aa25.69■■□□□ 1.7
VPS16-204ENST00000417508 NUP188Q5SRE5 1749 aa25.68■■□□□ 1.7
VPS16-204ENST00000417508 AMPHP49418 695 aa25.68■■□□□ 1.7
VPS16-204ENST00000417508 MAP3K19Q56UN5 1328 aa25.67■■□□□ 1.7
VPS16-204ENST00000417508 HOXC9P31274 260 aa25.65■■□□□ 1.7
VPS16-204ENST00000417508 PTF1AQ7RTS3 328 aa25.65■■□□□ 1.7
VPS16-204ENST00000417508 FAM208AQ9UK61 1670 aaKnown RBP25.64■■□□□ 1.69
VPS16-204ENST00000417508 LTV1Q96GA3 475 aaPredicted RBP25.63■■□□□ 1.69
VPS16-204ENST00000417508 GGNBP2Q9H3C7 697 aa25.63■■□□□ 1.69
VPS16-204ENST00000417508 KAT6BQ8WYB5 2073 aa25.62■■□□□ 1.69
VPS16-204ENST00000417508 RTL1A6NKG5 1358 aa25.62■■□□□ 1.69
VPS16-204ENST00000417508 PROM2Q8N271 834 aa25.61■■□□□ 1.69
VPS16-204ENST00000417508 FBLN1P23142 703 aa25.6■■□□□ 1.69
VPS16-204ENST00000417508 KCNQ2O43526 872 aa25.58■■□□□ 1.69
VPS16-204ENST00000417508 TXNRD1Q16881 649 aa25.58■■□□□ 1.69
VPS16-204ENST00000417508 RRS1Q15050 365 aaKnown RBP25.57■■□□□ 1.68
VPS16-204ENST00000417508 CCER1Q8TC90 406 aaPredicted RBP25.57■■□□□ 1.68
VPS16-204ENST00000417508 CARD14Q9BXL6 1004 aa25.57■■□□□ 1.68
VPS16-204ENST00000417508 KIF24Q5T7B8 1368 aa25.56■■□□□ 1.68
VPS16-204ENST00000417508 ACSBG1Q96GR2 724 aa25.55■■□□□ 1.68
VPS16-204ENST00000417508 SPON1Q9HCB6 807 aa25.55■■□□□ 1.68
VPS16-204ENST00000417508 NHSQ6T4R5 1651 aa25.55■■□□□ 1.68
VPS16-204ENST00000417508 DDX54Q8TDD1 881 aaKnown RBP25.54■■□□□ 1.68
VPS16-204ENST00000417508 KIF20BQ96Q89 1820 aa25.53■■□□□ 1.68
VPS16-204ENST00000417508 EIF4G2P78344 907 aaKnown RBP eCLIP25.53■■□□□ 1.68
VPS16-204ENST00000417508 CGNL1Q0VF96 1302 aa25.53■■□□□ 1.68
VPS16-204ENST00000417508 ZCRB1Q8TBF4 217 aaKnown RBP25.52■■□□□ 1.68
VPS16-204ENST00000417508 INSRP06213 1382 aa25.52■■□□□ 1.68
VPS16-204ENST00000417508 SMG6Q86US8 1419 aaKnown RBP25.52■■□□□ 1.68
VPS16-204ENST00000417508 NBPF6Q5VWK0 638 aa25.51■■□□□ 1.67
VPS16-204ENST00000417508 NBPF4Q96M43 638 aa25.51■■□□□ 1.67
VPS16-204ENST00000417508 ANO8Q9HCE9 1232 aaPredicted RBP25.51■■□□□ 1.67
VPS16-204ENST00000417508 STK32BQ9NY57 414 aa25.51■■□□□ 1.67
VPS16-204ENST00000417508 NSD3Q9BZ95 1437 aa25.51■■□□□ 1.67
VPS16-204ENST00000417508 MYOM1P52179 1685 aa25.51■■□□□ 1.67
VPS16-204ENST00000417508 FLT4P35916 1363 aa25.5■■□□□ 1.67
VPS16-204ENST00000417508 SLC15A2Q16348 729 aa25.49■■□□□ 1.67
VPS16-204ENST00000417508 RGPD2P0DJD1 1756 aa25.49■■□□□ 1.67
VPS16-204ENST00000417508 HSP90AB2PQ58FF8 381 aa25.48■■□□□ 1.67
VPS16-204ENST00000417508 RAPGEF4Q8WZA2 1011 aa25.47■■□□□ 1.67
VPS16-204ENST00000417508 BTAF1O14981 1849 aa25.46■■□□□ 1.67
VPS16-204ENST00000417508 HSPA5P11021 654 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms