RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 SLC24A1O60721 1099 aa28.29■■■□□ 2.12
CTTN-205ENST00000415461 SF3B2Q13435 895 aaKnown RBP28.29■■■□□ 2.12
CTTN-205ENST00000415461 USP54Q70EL1 1684 aa28.29■■■□□ 2.12
CTTN-205ENST00000415461 TMF1P82094 1093 aa28.27■■■□□ 2.12
CTTN-205ENST00000415461 CCER1Q8TC90 406 aaPredicted RBP28.26■■■□□ 2.11
CTTN-205ENST00000415461 THRAP3Q9Y2W1 955 aaKnown RBP28.26■■■□□ 2.11
CTTN-205ENST00000415461 TOM1L2Q6ZVM7 507 aa28.24■■■□□ 2.11
CTTN-205ENST00000415461 OVOS2A0A0J9YW53 1432 aa28.24■■■□□ 2.11
CTTN-205ENST00000415461 OVOS2Q6IE36 1432 aa28.24■■■□□ 2.11
CTTN-205ENST00000415461 WDR17Q8IZU2 1322 aa28.23■■■□□ 2.11
CTTN-205ENST00000415461 ABCC6O95255 1503 aa28.22■■■□□ 2.11
CTTN-205ENST00000415461 ANKRD36BQ8N2N9 1353 aa28.22■■■□□ 2.11
CTTN-205ENST00000415461 PDE3BQ13370 1112 aa28.2■■■□□ 2.1
CTTN-205ENST00000415461 PARP4Q9UKK3 1724 aaKnown RBP28.18■■■□□ 2.1
CTTN-205ENST00000415461 CSB-PGBD3P0DP91 1061 aa28.18■■■□□ 2.1
CTTN-205ENST00000415461 BAG6P46379 1132 aa28.18■■■□□ 2.1
CTTN-205ENST00000415461 FAM196AQ6ZSG2 479 aa28.18■■■□□ 2.1
CTTN-205ENST00000415461 RGPD1P0DJD0 1748 aa28.18■■■□□ 2.1
CTTN-205ENST00000415461 RGPD5Q99666 1765 aa28.16■■■□□ 2.1
CTTN-205ENST00000415461 LRRC37A3O60309 1634 aa28.15■■■□□ 2.1
CTTN-205ENST00000415461 TNS1Q9HBL0 1735 aaKnown RBP28.15■■■□□ 2.1
CTTN-205ENST00000415461 SRCAPQ6ZRS2 3230 aa28.14■■■□□ 2.1
CTTN-205ENST00000415461 TRIM37O94972 964 aa28.14■■■□□ 2.1
CTTN-205ENST00000415461 CDCA8Q53HL2 280 aa28.14■■■□□ 2.1
CTTN-205ENST00000415461 CARD10Q9BWT7 1032 aa28.13■■■□□ 2.09
CTTN-205ENST00000415461 LTN1O94822 1766 aa28.13■■■□□ 2.09
CTTN-205ENST00000415461 DISP2A7MBM2 1401 aa28.12■■■□□ 2.09
CTTN-205ENST00000415461 WNK3Q9BYP7 1800 aa28.11■■■□□ 2.09
CTTN-205ENST00000415461 EN1Q05925 392 aaPredicted RBP28.11■■■□□ 2.09
CTTN-205ENST00000415461 COG3Q96JB2 828 aa28.11■■■□□ 2.09
CTTN-205ENST00000415461 ERBB3P21860 1342 aa28.11■■■□□ 2.09
CTTN-205ENST00000415461 DDB1Q16531 1140 aa28.1■■■□□ 2.09
CTTN-205ENST00000415461 CCDC7Q96M83 1385 aa28.09■■■□□ 2.09
CTTN-205ENST00000415461 MYOM1P52179 1685 aa28.08■■■□□ 2.09
CTTN-205ENST00000415461 OVOS2A0A0G2JMS6 1433 aa28.08■■■□□ 2.09
CTTN-205ENST00000415461 ANKRD24Q8TF21 1146 aa28.07■■■□□ 2.08
CTTN-205ENST00000415461 CDCA7Q9BWT1 371 aaPredicted RBP28.07■■■□□ 2.08
CTTN-205ENST00000415461 PEAK1Q9H792 1746 aa28.06■■■□□ 2.08
CTTN-205ENST00000415461 FBLN1P23142 703 aa28.05■■■□□ 2.08
CTTN-205ENST00000415461 GGNBP2Q9H3C7 697 aa28.05■■■□□ 2.08
CTTN-205ENST00000415461 NLRP2Q9NX02 1062 aa28.05■■■□□ 2.08
CTTN-205ENST00000415461 FYB1O15117 783 aa28.04■■■□□ 2.08
CTTN-205ENST00000415461 MAP3K19Q56UN5 1328 aa28.03■■■□□ 2.08
CTTN-205ENST00000415461 APBA3O96018 575 aa28.03■■■□□ 2.08
CTTN-205ENST00000415461 EZH2Q15910 746 aaKnown RBP28.03■■■□□ 2.08
CTTN-205ENST00000415461 IP6K1Q92551 441 aa28.02■■■□□ 2.08
CTTN-205ENST00000415461 NSD3Q9BZ95 1437 aa28.01■■■□□ 2.08
CTTN-205ENST00000415461 MARCH10Q8NA82 808 aaPredicted RBP28.01■■■□□ 2.07
CTTN-205ENST00000415461 CAMKK2Q96RR4 588 aa28.01■■■□□ 2.07
CTTN-205ENST00000415461 CARD14Q9BXL6 1004 aa28.01■■■□□ 2.07
CTTN-205ENST00000415461 HSPA5P11021 654 aaKnown RBP28■■■□□ 2.07
CTTN-205ENST00000415461 EIF4G2P78344 907 aaKnown RBP eCLIP28■■■□□ 2.07
CTTN-205ENST00000415461 TNS2Q63HR2 1409 aa28■■■□□ 2.07
CTTN-205ENST00000415461 LTV1Q96GA3 475 aaPredicted RBP27.99■■■□□ 2.07
CTTN-205ENST00000415461 POLR3GLQ9BT43 218 aa27.99■■■□□ 2.07
CTTN-205ENST00000415461 C11orf95C9JLR9 678 aaPredicted RBP27.98■■■□□ 2.07
CTTN-205ENST00000415461 HOXC9P31274 260 aa27.98■■■□□ 2.07
CTTN-205ENST00000415461 KIF20BQ96Q89 1820 aa27.97■■■□□ 2.07
CTTN-205ENST00000415461 RRS1Q15050 365 aaKnown RBP27.97■■■□□ 2.07
CTTN-205ENST00000415461 PARD3Q8TEW0 1356 aa27.97■■■□□ 2.07
CTTN-205ENST00000415461 PSDA5PKW4 1024 aaPredicted RBP27.96■■■□□ 2.07
CTTN-205ENST00000415461 EXOC5O00471 708 aa27.96■■■□□ 2.07
CTTN-205ENST00000415461 AMPHP49418 695 aa27.96■■■□□ 2.07
CTTN-205ENST00000415461 RTL1A6NKG5 1358 aa27.95■■■□□ 2.06
CTTN-205ENST00000415461 BCL9O00512 1426 aa27.94■■■□□ 2.06
CTTN-205ENST00000415461 IL2RBP14784 551 aa27.94■■■□□ 2.06
CTTN-205ENST00000415461 PTF1AQ7RTS3 328 aa27.93■■■□□ 2.06
CTTN-205ENST00000415461 FAM208AQ9UK61 1670 aaKnown RBP27.91■■■□□ 2.06
CTTN-205ENST00000415461 RREB1Q92766 1687 aa27.91■■■□□ 2.06
CTTN-205ENST00000415461 BCL11BQ9C0K0 894 aaPredicted RBP27.89■■■□□ 2.06
CTTN-205ENST00000415461 SBF2Q86WG5 1849 aa27.89■■■□□ 2.06
CTTN-205ENST00000415461 R3HDM1Q15032 1099 aaKnown RBP27.88■■■□□ 2.05
CTTN-205ENST00000415461 NUP188Q5SRE5 1749 aa27.87■■■□□ 2.05
CTTN-205ENST00000415461 CGNL1Q0VF96 1302 aa27.86■■■□□ 2.05
CTTN-205ENST00000415461 FLT4P35916 1363 aa27.85■■■□□ 2.05
CTTN-205ENST00000415461 SMG6Q86US8 1419 aaKnown RBP27.84■■■□□ 2.05
CTTN-205ENST00000415461 HSP90AB2PQ58FF8 381 aa27.83■■■□□ 2.05
CTTN-205ENST00000415461 EMILIN1Q9Y6C2 1016 aa27.83■■■□□ 2.05
CTTN-205ENST00000415461 INSRP06213 1382 aa27.82■■■□□ 2.04
CTTN-205ENST00000415461 MEGF6O75095 1541 aa27.82■■■□□ 2.04
CTTN-205ENST00000415461 RGPD3A6NKT7 1758 aaPredicted RBP27.81■■■□□ 2.04
CTTN-205ENST00000415461 RGPD4Q7Z3J3 1758 aa27.81■■■□□ 2.04
CTTN-205ENST00000415461 PLSCR1O15162 318 aa27.81■■■□□ 2.04
CTTN-205ENST00000415461 KCNQ2O43526 872 aa27.81■■■□□ 2.04
CTTN-205ENST00000415461 NBPF6Q5VWK0 638 aa27.81■■■□□ 2.04
CTTN-205ENST00000415461 ACSBG1Q96GR2 724 aa27.81■■■□□ 2.04
CTTN-205ENST00000415461 NBPF4Q96M43 638 aa27.81■■■□□ 2.04
CTTN-205ENST00000415461 KIF24Q5T7B8 1368 aa27.81■■■□□ 2.04
CTTN-205ENST00000415461 USHBP1Q8N6Y0 703 aa27.8■■■□□ 2.04
CTTN-205ENST00000415461 RGPD2P0DJD1 1756 aa27.8■■■□□ 2.04
CTTN-205ENST00000415461 NHSQ6T4R5 1651 aa27.79■■■□□ 2.04
CTTN-205ENST00000415461 LRP5O75197 1615 aa27.79■■■□□ 2.04
CTTN-205ENST00000415461 PANK3Q9H999 370 aa27.79■■■□□ 2.04
CTTN-205ENST00000415461 NBPF14Q5TI25 921 aa27.76■■■□□ 2.03
CTTN-205ENST00000415461 DDX54Q8TDD1 881 aaKnown RBP27.76■■■□□ 2.03
CTTN-205ENST00000415461 PPM1GO15355 546 aaPredicted RBP27.75■■■□□ 2.03
CTTN-205ENST00000415461 PROM2Q8N271 834 aa27.74■■■□□ 2.03
CTTN-205ENST00000415461 ANKRD26Q9UPS8 1709 aa27.74■■■□□ 2.03
CTTN-205ENST00000415461 TNNT2P45379 298 aaPredicted RBP27.72■■■□□ 2.03
CTTN-205ENST00000415461 ANO8Q9HCE9 1232 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms