RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 PTF1AQ7RTS3 328 aa17.78■□□□□ 0.44
NCKIPSD-203ENST00000415281 ZBTB7CA1YPR0 619 aa17.77■□□□□ 0.44
NCKIPSD-203ENST00000415281 APBA3O96018 575 aa17.77■□□□□ 0.44
NCKIPSD-203ENST00000415281 PDE3BQ13370 1112 aa17.77■□□□□ 0.44
NCKIPSD-203ENST00000415281 TTC21AQ8NDW8 1320 aa17.76■□□□□ 0.43
NCKIPSD-203ENST00000415281 CARD11Q9BXL7 1154 aa17.76■□□□□ 0.43
NCKIPSD-203ENST00000415281 USP31Q70CQ4 1352 aa17.76■□□□□ 0.43
NCKIPSD-203ENST00000415281 KTN1Q86UP2 1357 aaKnown RBP17.76■□□□□ 0.43
NCKIPSD-203ENST00000415281 WDR17Q8IZU2 1322 aa17.75■□□□□ 0.43
NCKIPSD-203ENST00000415281 SLC12A5Q9H2X9 1139 aa17.75■□□□□ 0.43
NCKIPSD-203ENST00000415281 MARCH10Q8NA82 808 aaPredicted RBP17.74■□□□□ 0.43
NCKIPSD-203ENST00000415281 NME9Q86XW9 330 aa17.73■□□□□ 0.43
NCKIPSD-203ENST00000415281 TESK2Q96S53 571 aa17.73■□□□□ 0.43
NCKIPSD-203ENST00000415281 SOX12O15370 315 aa17.72■□□□□ 0.43
NCKIPSD-203ENST00000415281 TOM1L2Q6ZVM7 507 aa17.72■□□□□ 0.43
NCKIPSD-203ENST00000415281 KCNH5Q8NCM2 988 aa17.72■□□□□ 0.43
NCKIPSD-203ENST00000415281 PARD3Q8TEW0 1356 aa17.71■□□□□ 0.43
NCKIPSD-203ENST00000415281 LTN1O94822 1766 aa17.71■□□□□ 0.43
NCKIPSD-203ENST00000415281 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.7■□□□□ 0.42
NCKIPSD-203ENST00000415281 PROM2Q8N271 834 aa17.7■□□□□ 0.42
NCKIPSD-203ENST00000415281 CARD10Q9BWT7 1032 aa17.7■□□□□ 0.42
NCKIPSD-203ENST00000415281 DDB1Q16531 1140 aa17.69■□□□□ 0.42
NCKIPSD-203ENST00000415281 OVOS2A0A0G2JMS6 1433 aa17.69■□□□□ 0.42
NCKIPSD-203ENST00000415281 OVOS2A0A0J9YW53 1432 aa17.69■□□□□ 0.42
NCKIPSD-203ENST00000415281 OVOS2Q6IE36 1432 aa17.69■□□□□ 0.42
NCKIPSD-203ENST00000415281 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
NCKIPSD-203ENST00000415281 TONSLQ96HA7 1378 aa17.68■□□□□ 0.42
NCKIPSD-203ENST00000415281 ABCC6O95255 1503 aa17.68■□□□□ 0.42
NCKIPSD-203ENST00000415281 BCL9O00512 1426 aa17.68■□□□□ 0.42
NCKIPSD-203ENST00000415281 PUS7Q96PZ0 661 aaKnown RBP17.68■□□□□ 0.42
NCKIPSD-203ENST00000415281 RGPD3A6NKT7 1758 aaPredicted RBP17.68■□□□□ 0.42
NCKIPSD-203ENST00000415281 RGPD4Q7Z3J3 1758 aa17.68■□□□□ 0.42
NCKIPSD-203ENST00000415281 ST20-MTHFSA0A0A6YYL1 179 aa17.67■□□□□ 0.42
NCKIPSD-203ENST00000415281 PLSCR1O15162 318 aa17.66■□□□□ 0.42
NCKIPSD-203ENST00000415281 TMC1Q8TDI8 760 aa17.66■□□□□ 0.42
NCKIPSD-203ENST00000415281 EDC4Q6P2E9 1401 aaKnown RBP17.65■□□□□ 0.42
NCKIPSD-203ENST00000415281 BCL11BQ9C0K0 894 aaPredicted RBP17.65■□□□□ 0.42
NCKIPSD-203ENST00000415281 PCGF6Q9BYE7 350 aa17.64■□□□□ 0.41
NCKIPSD-203ENST00000415281 FBLN1P23142 703 aa17.63■□□□□ 0.41
NCKIPSD-203ENST00000415281 CDCA7Q9BWT1 371 aaPredicted RBP17.63■□□□□ 0.41
NCKIPSD-203ENST00000415281 ERBB3P21860 1342 aa17.63■□□□□ 0.41
NCKIPSD-203ENST00000415281 C11orf95C9JLR9 678 aaPredicted RBP17.62■□□□□ 0.41
NCKIPSD-203ENST00000415281 KCNQ2O43526 872 aa17.62■□□□□ 0.41
NCKIPSD-203ENST00000415281 PDGFDQ9GZP0 370 aaPredicted RBP17.62■□□□□ 0.41
NCKIPSD-203ENST00000415281 ANO8Q9HCE9 1232 aaPredicted RBP17.62■□□□□ 0.41
NCKIPSD-203ENST00000415281 CCDC7Q96M83 1385 aa17.62■□□□□ 0.41
NCKIPSD-203ENST00000415281 CSB-PGBD3P0DP91 1061 aa17.61■□□□□ 0.41
NCKIPSD-203ENST00000415281 HDGFL2Q7Z4V5 671 aaPredicted RBP17.61■□□□□ 0.41
NCKIPSD-203ENST00000415281 CASZ1Q86V15 1759 aa17.61■□□□□ 0.41
NCKIPSD-203ENST00000415281 EXOC5O00471 708 aa17.6■□□□□ 0.41
NCKIPSD-203ENST00000415281 RGPD2P0DJD1 1756 aa17.59■□□□□ 0.41
NCKIPSD-203ENST00000415281 TNS2Q63HR2 1409 aa17.59■□□□□ 0.41
NCKIPSD-203ENST00000415281 ANKRD24Q8TF21 1146 aa17.59■□□□□ 0.41
NCKIPSD-203ENST00000415281 TERF2IPQ9NYB0 399 aa17.59■□□□□ 0.41
NCKIPSD-203ENST00000415281 NHSQ6T4R5 1651 aa17.58■□□□□ 0.41
NCKIPSD-203ENST00000415281 NBPF14Q5TI25 921 aa17.58■□□□□ 0.4
NCKIPSD-203ENST00000415281 IP6K1Q92551 441 aa17.57■□□□□ 0.4
NCKIPSD-203ENST00000415281 FAM208AQ9UK61 1670 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-203ENST00000415281 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
NCKIPSD-203ENST00000415281 TXNRD1Q16881 649 aa17.55■□□□□ 0.4
NCKIPSD-203ENST00000415281 MAP3K19Q56UN5 1328 aa17.54■□□□□ 0.4
NCKIPSD-203ENST00000415281 IL2RBP14784 551 aa17.54■□□□□ 0.4
NCKIPSD-203ENST00000415281 SHANK3Q9BYB0 1731 aa17.54■□□□□ 0.4
NCKIPSD-203ENST00000415281 BTAF1O14981 1849 aa17.54■□□□□ 0.4
NCKIPSD-203ENST00000415281 NINLQ9Y2I6 1382 aa17.53■□□□□ 0.4
NCKIPSD-203ENST00000415281 FYB1O15117 783 aa17.53■□□□□ 0.4
NCKIPSD-203ENST00000415281 ACSBG1Q96GR2 724 aa17.53■□□□□ 0.4
NCKIPSD-203ENST00000415281 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
NCKIPSD-203ENST00000415281 PAPPAQ13219 1627 aa17.52■□□□□ 0.4
NCKIPSD-203ENST00000415281 HOXC9P31274 260 aa17.52■□□□□ 0.4
NCKIPSD-203ENST00000415281 USP47Q96K76 1375 aa17.52■□□□□ 0.39
NCKIPSD-203ENST00000415281 MYOM1P52179 1685 aa17.51■□□□□ 0.39
NCKIPSD-203ENST00000415281 LTV1Q96GA3 475 aaPredicted RBP17.5■□□□□ 0.39
NCKIPSD-203ENST00000415281 CARD14Q9BXL6 1004 aa17.5■□□□□ 0.39
NCKIPSD-203ENST00000415281 SPON1Q9HCB6 807 aa17.5■□□□□ 0.39
NCKIPSD-203ENST00000415281 PTGER2P43116 358 aa17.49■□□□□ 0.39
NCKIPSD-203ENST00000415281 SLC15A2Q16348 729 aa17.49■□□□□ 0.39
NCKIPSD-203ENST00000415281 COG3Q96JB2 828 aa17.49■□□□□ 0.39
NCKIPSD-203ENST00000415281 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
NCKIPSD-203ENST00000415281 LRRC4BQ9NT99 713 aa17.49■□□□□ 0.39
NCKIPSD-203ENST00000415281 RRS1Q15050 365 aaKnown RBP17.47■□□□□ 0.39
NCKIPSD-203ENST00000415281 NBPF6Q5VWK0 638 aa17.47■□□□□ 0.39
NCKIPSD-203ENST00000415281 NBPF4Q96M43 638 aa17.47■□□□□ 0.39
NCKIPSD-203ENST00000415281 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
NCKIPSD-203ENST00000415281 TMF1P82094 1093 aa17.46■□□□□ 0.39
NCKIPSD-203ENST00000415281 SGIP1Q9BQI5 828 aa17.46■□□□□ 0.39
NCKIPSD-203ENST00000415281 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
NCKIPSD-203ENST00000415281 MEGF6O75095 1541 aa17.46■□□□□ 0.39
NCKIPSD-203ENST00000415281 UTRNP46939 3433 aa17.46■□□□□ 0.38
NCKIPSD-203ENST00000415281 NSD2O96028 1365 aa17.45■□□□□ 0.38
NCKIPSD-203ENST00000415281 KAT6BQ8WYB5 2073 aa17.45■□□□□ 0.38
NCKIPSD-203ENST00000415281 ZBTB7AO95365 584 aa17.45■□□□□ 0.38
NCKIPSD-203ENST00000415281 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
NCKIPSD-203ENST00000415281 DDX54Q8TDD1 881 aaKnown RBP17.44■□□□□ 0.38
NCKIPSD-203ENST00000415281 DOT1LQ8TEK3 1739 aa17.44■□□□□ 0.38
NCKIPSD-203ENST00000415281 ATF5Q9Y2D1 282 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-203ENST00000415281 LY75O60449 1722 aa17.42■□□□□ 0.38
NCKIPSD-203ENST00000415281 AMPHP49418 695 aa17.42■□□□□ 0.38
NCKIPSD-203ENST00000415281 HSP90AB2PQ58FF8 381 aa17.42■□□□□ 0.38
NCKIPSD-203ENST00000415281 USHBP1Q8N6Y0 703 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms