RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
PTPRK-209ENST00000415046 CCDC116Q8IYX3 515 aa9.57□□□□□ -0.88
PTPRK-209ENST00000415046 IL27Q8NEV9 243 aa9.57□□□□□ -0.88
PTPRK-209ENST00000415046 CDV3Q9UKY7 258 aaKnown RBP9.57□□□□□ -0.88
PTPRK-209ENST00000415046 EMILIN1Q9Y6C2 1016 aa9.57□□□□□ -0.88
PTPRK-209ENST00000415046 PTK2Q05397 1052 aa9.56□□□□□ -0.88
PTPRK-209ENST00000415046 PNMA1Q8ND90 353 aa9.56□□□□□ -0.88
PTPRK-209ENST00000415046 TMEM259Q4ZIN3 620 aa9.55□□□□□ -0.88
PTPRK-209ENST00000415046 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
PTPRK-209ENST00000415046 NXF1Q9UBU9 619 aaKnown RBP9.55□□□□□ -0.88
PTPRK-209ENST00000415046 WIPF1O43516 503 aa9.54□□□□□ -0.88
PTPRK-209ENST00000415046 NPAS3Q8IXF0 933 aa9.54□□□□□ -0.88
PTPRK-209ENST00000415046 LINC00528Q8N1L1 170 aa9.54□□□□□ -0.88
PTPRK-209ENST00000415046 ADAM32Q8TC27 787 aa9.54□□□□□ -0.88
PTPRK-209ENST00000415046 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
PTPRK-209ENST00000415046 KCTD15Q96SI1 283 aaPredicted RBP9.53□□□□□ -0.88
PTPRK-209ENST00000415046 TPRNQ4KMQ1 711 aa9.52□□□□□ -0.89
PTPRK-209ENST00000415046 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
PTPRK-209ENST00000415046 PPP1R26Q5T8A7 1209 aaPredicted RBP9.52□□□□□ -0.89
PTPRK-209ENST00000415046 UPP2O95045 317 aa9.51□□□□□ -0.89
PTPRK-209ENST00000415046 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
PTPRK-209ENST00000415046 PGPEP1Q9NXJ5 209 aa9.51□□□□□ -0.89
PTPRK-209ENST00000415046 DHX9Q08211 1270 aaKnown RBP9.5□□□□□ -0.89
PTPRK-209ENST00000415046 SLC16A10Q8TF71 515 aa9.5□□□□□ -0.89
PTPRK-209ENST00000415046 SOBPA7XYQ1 873 aa9.49□□□□□ -0.89
PTPRK-209ENST00000415046 H3BM21 787 aa9.49□□□□□ -0.89
PTPRK-209ENST00000415046 BMP2P12643 396 aa9.49□□□□□ -0.89
PTPRK-209ENST00000415046 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
PTPRK-209ENST00000415046 GJD4Q96KN9 370 aaPredicted RBP9.49□□□□□ -0.89
PTPRK-209ENST00000415046 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
PTPRK-209ENST00000415046 Q6ZVU0 165 aa9.48□□□□□ -0.89
PTPRK-209ENST00000415046 MAN1A2O60476 641 aa9.47□□□□□ -0.89
PTPRK-209ENST00000415046 SOS2Q07890 1332 aaPredicted RBP9.47□□□□□ -0.89
PTPRK-209ENST00000415046 SOCS7O14512 581 aa9.46□□□□□ -0.9
PTPRK-209ENST00000415046 VEGFBP49765 207 aa9.46□□□□□ -0.9
PTPRK-209ENST00000415046 CBLBQ13191 982 aa9.46□□□□□ -0.9
PTPRK-209ENST00000415046 IRF7Q92985 503 aa9.46□□□□□ -0.9
PTPRK-209ENST00000415046 INSM1Q01101 510 aaPredicted RBP9.45□□□□□ -0.9
PTPRK-209ENST00000415046 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
PTPRK-209ENST00000415046 BANK1Q8NDB2 785 aa9.45□□□□□ -0.9
PTPRK-209ENST00000415046 DNMT3LQ9UJW3 386 aa9.45□□□□□ -0.9
PTPRK-209ENST00000415046 ESPNB1AK53 854 aa9.44□□□□□ -0.9
PTPRK-209ENST00000415046 ERBB4Q15303 1308 aa9.43□□□□□ -0.9
PTPRK-209ENST00000415046 ZBBXA8MT70 800 aa9.43□□□□□ -0.9
PTPRK-209ENST00000415046 SPINT1O43278 529 aa9.43□□□□□ -0.9
PTPRK-209ENST00000415046 VSIG8P0DPA2 414 aa9.42□□□□□ -0.9
PTPRK-209ENST00000415046 GMPRP36959 345 aa9.42□□□□□ -0.9
PTPRK-209ENST00000415046 TTLL8A6PVC2 850 aa9.41□□□□□ -0.9
PTPRK-209ENST00000415046 FBXO45P0C2W1 286 aa9.41□□□□□ -0.9
PTPRK-209ENST00000415046 SEPT12Q8IYM1 358 aa9.41□□□□□ -0.9
PTPRK-209ENST00000415046 ZNF784Q8NCA9 323 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-209ENST00000415046 MTMR14Q8NCE2 650 aa9.41□□□□□ -0.9
PTPRK-209ENST00000415046 TMPRSS4Q9NRS4 437 aa9.41□□□□□ -0.9
PTPRK-209ENST00000415046 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.9
PTPRK-209ENST00000415046 GPR37L1O60883 481 aa9.4□□□□□ -0.9
PTPRK-209ENST00000415046 STK17AQ9UEE5 414 aa9.4□□□□□ -0.9
PTPRK-209ENST00000415046 LILRA1O75019 489 aa9.39□□□□□ -0.91
PTPRK-209ENST00000415046 RAB15P59190 212 aa9.39□□□□□ -0.91
PTPRK-209ENST00000415046 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.39□□□□□ -0.916e-6■■■■□ 22.7
PTPRK-209ENST00000415046 AGBL1Q96MI9 1066 aa9.39□□□□□ -0.91
PTPRK-209ENST00000415046 ADH1AP07327 375 aa9.38□□□□□ -0.91
PTPRK-209ENST00000415046 PCDHB9Q9Y5E1 797 aa9.38□□□□□ -0.91
PTPRK-209ENST00000415046 PPFIA3O75145 1194 aa9.37□□□□□ -0.91
PTPRK-209ENST00000415046 RELBQ01201 579 aa9.37□□□□□ -0.91
PTPRK-209ENST00000415046 NDUFB9Q9Y6M9 179 aa9.37□□□□□ -0.91
PTPRK-209ENST00000415046 APBB1O00213 710 aa9.36□□□□□ -0.91
PTPRK-209ENST00000415046 NR1H3Q13133 447 aa9.36□□□□□ -0.91
PTPRK-209ENST00000415046 SNRKQ9NRH2 765 aa9.36□□□□□ -0.91
PTPRK-209ENST00000415046 ADD1P35611 737 aaKnown RBP9.35□□□□□ -0.91
PTPRK-209ENST00000415046 CTSOP43234 321 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-209ENST00000415046 INSM2Q96T92 566 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-209ENST00000415046 FIGNL2A6NMB9 653 aa9.34□□□□□ -0.91
PTPRK-209ENST00000415046 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-209ENST00000415046 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-209ENST00000415046 PTSQ03393 145 aa9.34□□□□□ -0.91
PTPRK-209ENST00000415046 CCDC125Q86Z20 511 aa9.34□□□□□ -0.91
PTPRK-209ENST00000415046 KDF1Q8NAX2 398 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-209ENST00000415046 MCCD1P59942 119 aaPredicted RBP9.33□□□□□ -0.92
PTPRK-209ENST00000415046 ZNF592Q92610 1267 aa9.33□□□□□ -0.92
PTPRK-209ENST00000415046 TRIM52Q96A61 297 aa9.33□□□□□ -0.92
PTPRK-209ENST00000415046 CYLDQ9NQC7 956 aa9.33□□□□□ -0.92
PTPRK-209ENST00000415046 PTGIRP43119 386 aa9.32□□□□□ -0.92
PTPRK-209ENST00000415046 RNF217Q8TC41 542 aa9.32□□□□□ -0.92
PTPRK-209ENST00000415046 ZNF395Q9H8N7 513 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-209ENST00000415046 POLMQ9NP87 494 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-209ENST00000415046 RNF20Q5VTR2 975 aa9.31□□□□□ -0.92
PTPRK-209ENST00000415046 ZSCAN1Q8NBB4 408 aa9.31□□□□□ -0.92
PTPRK-209ENST00000415046 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
PTPRK-209ENST00000415046 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
PTPRK-209ENST00000415046 SLC35F4A4IF30 521 aa9.29□□□□□ -0.92
PTPRK-209ENST00000415046 ERVK-9P63128 1117 aa9.29□□□□□ -0.92
PTPRK-209ENST00000415046 CCDC155Q8N6L0 562 aa9.29□□□□□ -0.92
PTPRK-209ENST00000415046 ATP5J2-PTCD1G3V325 749 aa9.27□□□□□ -0.93
PTPRK-209ENST00000415046 CC2D2BQ6DHV5 1058 aa9.27□□□□□ -0.93
PTPRK-209ENST00000415046 NANOS1Q8WY41 292 aaKnown RBP9.27□□□□□ -0.93
PTPRK-209ENST00000415046 TBC1D2BQ9UPU7 963 aa9.27□□□□□ -0.93
PTPRK-209ENST00000415046 SENP3-EIF4A1A0A087X0R7 540 aa9.26□□□□□ -0.93
PTPRK-209ENST00000415046 FAM181BA6NEQ2 426 aa9.26□□□□□ -0.93
PTPRK-209ENST00000415046 ITGA6P23229 1130 aa9.25□□□□□ -0.93
PTPRK-209ENST00000415046 PRKCSHP14314 528 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms