RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 STRN4Q9NRL3 753 aa15.37■□□□□ 0.05
A1CF-208ENST00000414883 LTN1O94822 1766 aa15.36■□□□□ 0.05
A1CF-208ENST00000414883 HDGFL2Q7Z4V5 671 aaPredicted RBP15.36■□□□□ 0.05
A1CF-208ENST00000414883 TERF2IPQ9NYB0 399 aa15.36■□□□□ 0.05
A1CF-208ENST00000414883 ANKRD36BQ8N2N9 1353 aa15.36■□□□□ 0.05
A1CF-208ENST00000414883 ABCC6O95255 1503 aa15.35■□□□□ 0.05
A1CF-208ENST00000414883 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
A1CF-208ENST00000414883 TMF1P82094 1093 aa15.35■□□□□ 0.05
A1CF-208ENST00000414883 KRT27Q7Z3Y8 459 aa15.35■□□□□ 0.05
A1CF-208ENST00000414883 WNK3Q9BYP7 1800 aa15.34■□□□□ 0.05
A1CF-208ENST00000414883 KCNH5Q8NCM2 988 aa15.34■□□□□ 0.05
A1CF-208ENST00000414883 RNF216Q9NWF9 866 aaPredicted RBP15.34■□□□□ 0.05
A1CF-208ENST00000414883 PARP4Q9UKK3 1724 aaKnown RBP15.34■□□□□ 0.05
A1CF-208ENST00000414883 BARGINQ6ZT62 677 aa15.33■□□□□ 0.04
A1CF-208ENST00000414883 CRB1P82279 1406 aa15.33■□□□□ 0.04
A1CF-208ENST00000414883 SOX12O15370 315 aa15.32■□□□□ 0.04
A1CF-208ENST00000414883 EVA1CP58658 441 aa15.32■□□□□ 0.04
A1CF-208ENST00000414883 TCP11L2Q8N4U5 519 aa15.31■□□□□ 0.04
A1CF-208ENST00000414883 USP35Q9P2H5 1018 aa15.31■□□□□ 0.04
A1CF-208ENST00000414883 BLMP54132 1417 aaPredicted RBP15.31■□□□□ 0.04
A1CF-208ENST00000414883 ZBTB7CA1YPR0 619 aa15.3■□□□□ 0.04
A1CF-208ENST00000414883 FAM182BQ5T319 152 aa15.3■□□□□ 0.04
A1CF-208ENST00000414883 CCDC125Q86Z20 511 aa15.3■□□□□ 0.04
A1CF-208ENST00000414883 WDR17Q8IZU2 1322 aa15.3■□□□□ 0.04
A1CF-208ENST00000414883 KIF20BQ96Q89 1820 aa15.3■□□□□ 0.04
A1CF-208ENST00000414883 CARD14Q9BXL6 1004 aa15.3■□□□□ 0.04
A1CF-208ENST00000414883 TNS1Q9HBL0 1735 aaKnown RBP15.3■□□□□ 0.04
A1CF-208ENST00000414883 THRAP3Q9Y2W1 955 aaKnown RBP15.3■□□□□ 0.04
A1CF-208ENST00000414883 LRRC37A3O60309 1634 aa15.29■□□□□ 0.04
A1CF-208ENST00000414883 HSPA5P11021 654 aaKnown RBP15.29■□□□□ 0.04
A1CF-208ENST00000414883 PEAK1Q9H792 1746 aa15.29■□□□□ 0.04
A1CF-208ENST00000414883 A0A0G2JS52 829 aa15.28■□□□□ 0.04
A1CF-208ENST00000414883 FYB1O15117 783 aa15.28■□□□□ 0.04
A1CF-208ENST00000414883 MYT1Q01538 1121 aa15.28■□□□□ 0.04
A1CF-208ENST00000414883 CDCA8Q53HL2 280 aa15.28■□□□□ 0.04
A1CF-208ENST00000414883 DISP2A7MBM2 1401 aa15.27■□□□□ 0.04
A1CF-208ENST00000414883 RGPD1P0DJD0 1748 aa15.27■□□□□ 0.04
A1CF-208ENST00000414883 FBLN1P23142 703 aa15.26■□□□□ 0.03
A1CF-208ENST00000414883 EIF4G2P78344 907 aaKnown RBP eCLIP15.26■□□□□ 0.03
A1CF-208ENST00000414883 ERBB3P21860 1342 aa15.25■□□□□ 0.03
A1CF-208ENST00000414883 SBF2Q86WG5 1849 aa15.25■□□□□ 0.03
A1CF-208ENST00000414883 C11orf95C9JLR9 678 aaPredicted RBP15.25■□□□□ 0.03
A1CF-208ENST00000414883 DEFB132Q7Z7B7 95 aa15.25■□□□□ 0.03
A1CF-208ENST00000414883 CARD10Q9BWT7 1032 aa15.25■□□□□ 0.03
A1CF-208ENST00000414883 TOM1L2Q6ZVM7 507 aa15.24■□□□□ 0.03
A1CF-208ENST00000414883 RGPD2P0DJD1 1756 aa15.24■□□□□ 0.03
A1CF-208ENST00000414883 MAP3K19Q56UN5 1328 aa15.23■□□□□ 0.03
A1CF-208ENST00000414883 COG3Q96JB2 828 aa15.23■□□□□ 0.03
A1CF-208ENST00000414883 GGNBP2Q9H3C7 697 aa15.23■□□□□ 0.03
A1CF-208ENST00000414883 NSD3Q9BZ95 1437 aa15.23■□□□□ 0.03
A1CF-208ENST00000414883 IP6K1Q92551 441 aa15.22■□□□□ 0.03
A1CF-208ENST00000414883 FAM208AQ9UK61 1670 aaKnown RBP15.22■□□□□ 0.03
A1CF-208ENST00000414883 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
A1CF-208ENST00000414883 ANKRD24Q8TF21 1146 aa15.21■□□□□ 0.03
A1CF-208ENST00000414883 ANKRD26Q9UPS8 1709 aa15.2■□□□□ 0.02
A1CF-208ENST00000414883 CCDC7Q96M83 1385 aa15.2■□□□□ 0.02
A1CF-208ENST00000414883 HOXC9P31274 260 aa15.19■□□□□ 0.02
A1CF-208ENST00000414883 PDE3BQ13370 1112 aa15.19■□□□□ 0.02
A1CF-208ENST00000414883 RRS1Q15050 365 aaKnown RBP15.19■□□□□ 0.02
A1CF-208ENST00000414883 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
A1CF-208ENST00000414883 MAP2P11137 1827 aaKnown RBP15.18■□□□□ 0.02
A1CF-208ENST00000414883 TRIM37O94972 964 aa15.18■□□□□ 0.02
A1CF-208ENST00000414883 CSB-PGBD3P0DP91 1061 aa15.18■□□□□ 0.02
A1CF-208ENST00000414883 RTL1A6NKG5 1358 aa15.18■□□□□ 0.02
A1CF-208ENST00000414883 BCL9O00512 1426 aa15.17■□□□□ 0.02
A1CF-208ENST00000414883 DDB1Q16531 1140 aa15.17■□□□□ 0.02
A1CF-208ENST00000414883 CDCA7Q9BWT1 371 aaPredicted RBP15.17■□□□□ 0.02
A1CF-208ENST00000414883 OVOS2A0A0G2JMS6 1433 aa15.17■□□□□ 0.02
A1CF-208ENST00000414883 TNS2Q63HR2 1409 aa15.17■□□□□ 0.02
A1CF-208ENST00000414883 RREB1Q92766 1687 aa15.16■□□□□ 0.02
A1CF-208ENST00000414883 SF3B2Q13435 895 aaKnown RBP15.16■□□□□ 0.02
A1CF-208ENST00000414883 NLRP2Q9NX02 1062 aa15.16■□□□□ 0.02
A1CF-208ENST00000414883 SHANK3Q9BYB0 1731 aa15.15■□□□□ 0.02
A1CF-208ENST00000414883 EN1Q05925 392 aaPredicted RBP15.15■□□□□ 0.02
A1CF-208ENST00000414883 PTF1AQ7RTS3 328 aa15.15■□□□□ 0.02
A1CF-208ENST00000414883 CAMKK2Q96RR4 588 aa15.15■□□□□ 0.02
A1CF-208ENST00000414883 PANK3Q9H999 370 aa15.15■□□□□ 0.02
A1CF-208ENST00000414883 BAG6P46379 1132 aa15.14■□□□□ 0.01
A1CF-208ENST00000414883 AMPHP49418 695 aa15.14■□□□□ 0.01
A1CF-208ENST00000414883 POLR3GLQ9BT43 218 aa15.14■□□□□ 0.01
A1CF-208ENST00000414883 CGNL1Q0VF96 1302 aa15.14■□□□□ 0.01
A1CF-208ENST00000414883 KIF7Q2M1P5 1343 aa15.14■□□□□ 0.01
A1CF-208ENST00000414883 RGPD3A6NKT7 1758 aaPredicted RBP15.13■□□□□ 0.01
A1CF-208ENST00000414883 RGPD4Q7Z3J3 1758 aa15.13■□□□□ 0.01
A1CF-208ENST00000414883 INSRP06213 1382 aa15.13■□□□□ 0.01
A1CF-208ENST00000414883 KIF24Q5T7B8 1368 aa15.13■□□□□ 0.01
A1CF-208ENST00000414883 NUP188Q5SRE5 1749 aa15.13■□□□□ 0.01
A1CF-208ENST00000414883 LTV1Q96GA3 475 aaPredicted RBP15.13■□□□□ 0.01
A1CF-208ENST00000414883 IL2RBP14784 551 aa15.12■□□□□ 0.01
A1CF-208ENST00000414883 EZH2Q15910 746 aaKnown RBP15.12■□□□□ 0.01
A1CF-208ENST00000414883 HSP90AB2PQ58FF8 381 aa15.12■□□□□ 0.01
A1CF-208ENST00000414883 EMILIN1Q9Y6C2 1016 aa15.12■□□□□ 0.01
A1CF-208ENST00000414883 FLT4P35916 1363 aa15.11■□□□□ 0.01
A1CF-208ENST00000414883 EXOC5O00471 708 aa15.11■□□□□ 0.01
A1CF-208ENST00000414883 NBPF6Q5VWK0 638 aa15.11■□□□□ 0.01
A1CF-208ENST00000414883 NBPF4Q96M43 638 aa15.11■□□□□ 0.01
A1CF-208ENST00000414883 NHSQ6T4R5 1651 aa15.11■□□□□ 0.01
A1CF-208ENST00000414883 MEGF6O75095 1541 aa15.11■□□□□ 0.01
A1CF-208ENST00000414883 NCAPD2Q15021 1401 aa15.1■□□□□ 0.01
A1CF-208ENST00000414883 APBA3O96018 575 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms