RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 CRB1P82279 1406 aa36.8■■■■□ 3.48
VEGFA-207ENST00000413642 DEFB132Q7Z7B7 95 aa36.8■■■■□ 3.48
VEGFA-207ENST00000413642 TOM1L2Q6ZVM7 507 aa36.79■■■■□ 3.48
VEGFA-207ENST00000413642 ANKRD36BQ8N2N9 1353 aa36.78■■■■□ 3.48
VEGFA-207ENST00000413642 EP400Q96L91 3159 aa36.77■■■■□ 3.48
VEGFA-207ENST00000413642 THRAP3Q9Y2W1 955 aaKnown RBP36.76■■■■□ 3.48
VEGFA-207ENST00000413642 WDR17Q8IZU2 1322 aa36.76■■■■□ 3.47
VEGFA-207ENST00000413642 OVOS2A0A0J9YW53 1432 aa36.76■■■■□ 3.47
VEGFA-207ENST00000413642 OVOS2Q6IE36 1432 aa36.76■■■■□ 3.47
VEGFA-207ENST00000413642 CDCA8Q53HL2 280 aa36.75■■■■□ 3.47
VEGFA-207ENST00000413642 CSB-PGBD3P0DP91 1061 aa36.73■■■■□ 3.47
VEGFA-207ENST00000413642 SF3B2Q13435 895 aaKnown RBP36.73■■■■□ 3.47
VEGFA-207ENST00000413642 USP54Q70EL1 1684 aa36.73■■■■□ 3.47
VEGFA-207ENST00000413642 PDE3BQ13370 1112 aa36.71■■■■□ 3.47
VEGFA-207ENST00000413642 HSPA5P11021 654 aaKnown RBP36.69■■■■□ 3.46
VEGFA-207ENST00000413642 FBLN1P23142 703 aa36.69■■■■□ 3.46
VEGFA-207ENST00000413642 COG3Q96JB2 828 aa36.68■■■■□ 3.46
VEGFA-207ENST00000413642 EIF4G2P78344 907 aaKnown RBP eCLIP36.67■■■■□ 3.46
VEGFA-207ENST00000413642 FYB1O15117 783 aa36.65■■■■□ 3.46
VEGFA-207ENST00000413642 FAM196AQ6ZSG2 479 aa36.65■■■■□ 3.46
VEGFA-207ENST00000413642 CARD10Q9BWT7 1032 aa36.65■■■■□ 3.46
VEGFA-207ENST00000413642 GGNBP2Q9H3C7 697 aa36.65■■■■□ 3.46
VEGFA-207ENST00000413642 RGPD5Q99666 1765 aa36.65■■■■□ 3.46
VEGFA-207ENST00000413642 POLR3GLQ9BT43 218 aa36.64■■■■□ 3.46
VEGFA-207ENST00000413642 CARD14Q9BXL6 1004 aa36.64■■■■□ 3.46
VEGFA-207ENST00000413642 TRIM37O94972 964 aa36.62■■■■□ 3.45
VEGFA-207ENST00000413642 ABCC6O95255 1503 aa36.6■■■■□ 3.45
VEGFA-207ENST00000413642 ERBB3P21860 1342 aa36.59■■■■□ 3.45
VEGFA-207ENST00000413642 BAG6P46379 1132 aa36.59■■■■□ 3.45
VEGFA-207ENST00000413642 ANKRD24Q8TF21 1146 aa36.59■■■■□ 3.45
VEGFA-207ENST00000413642 EN1Q05925 392 aaPredicted RBP36.58■■■■□ 3.45
VEGFA-207ENST00000413642 DDB1Q16531 1140 aa36.58■■■■□ 3.45
VEGFA-207ENST00000413642 NLRP2Q9NX02 1062 aa36.58■■■■□ 3.45
VEGFA-207ENST00000413642 MAP3K19Q56UN5 1328 aa36.58■■■■□ 3.45
VEGFA-207ENST00000413642 IP6K1Q92551 441 aa36.57■■■■□ 3.44
VEGFA-207ENST00000413642 MYOM1P52179 1685 aa36.56■■■■□ 3.44
VEGFA-207ENST00000413642 PARP4Q9UKK3 1724 aaKnown RBP36.56■■■■□ 3.44
VEGFA-207ENST00000413642 LTN1O94822 1766 aa36.55■■■■□ 3.44
VEGFA-207ENST00000413642 LTV1Q96GA3 475 aaPredicted RBP36.54■■■■□ 3.44
VEGFA-207ENST00000413642 DISP2A7MBM2 1401 aa36.53■■■■□ 3.44
VEGFA-207ENST00000413642 NSD3Q9BZ95 1437 aa36.53■■■■□ 3.44
VEGFA-207ENST00000413642 CCDC7Q96M83 1385 aa36.53■■■■□ 3.44
VEGFA-207ENST00000413642 RRS1Q15050 365 aaKnown RBP36.52■■■■□ 3.44
VEGFA-207ENST00000413642 CDCA7Q9BWT1 371 aaPredicted RBP36.52■■■■□ 3.44
VEGFA-207ENST00000413642 LRRC37A3O60309 1634 aa36.51■■■■□ 3.43
VEGFA-207ENST00000413642 HOXC9P31274 260 aa36.5■■■■□ 3.43
VEGFA-207ENST00000413642 AMPHP49418 695 aa36.5■■■■□ 3.43
VEGFA-207ENST00000413642 MARCH10Q8NA82 808 aaPredicted RBP36.5■■■■□ 3.43
VEGFA-207ENST00000413642 C11orf95C9JLR9 678 aaPredicted RBP36.49■■■■□ 3.43
VEGFA-207ENST00000413642 RGPD1P0DJD0 1748 aa36.48■■■■□ 3.43
VEGFA-207ENST00000413642 APBA3O96018 575 aa36.48■■■■□ 3.43
VEGFA-207ENST00000413642 EZH2Q15910 746 aaKnown RBP36.46■■■■□ 3.43
VEGFA-207ENST00000413642 TNS1Q9HBL0 1735 aaKnown RBP36.45■■■■□ 3.43
VEGFA-207ENST00000413642 EXOC5O00471 708 aa36.45■■■■□ 3.43
VEGFA-207ENST00000413642 OVOS2A0A0G2JMS6 1433 aa36.44■■■■□ 3.42
VEGFA-207ENST00000413642 WNK3Q9BYP7 1800 aa36.43■■■■□ 3.42
VEGFA-207ENST00000413642 CAMKK2Q96RR4 588 aa36.43■■■■□ 3.42
VEGFA-207ENST00000413642 PTF1AQ7RTS3 328 aa36.42■■■■□ 3.42
VEGFA-207ENST00000413642 IL2RBP14784 551 aa36.41■■■■□ 3.42
VEGFA-207ENST00000413642 PEAK1Q9H792 1746 aa36.41■■■■□ 3.42
VEGFA-207ENST00000413642 PANK3Q9H999 370 aa36.38■■■■□ 3.41
VEGFA-207ENST00000413642 KIF20BQ96Q89 1820 aa36.37■■■■□ 3.41
VEGFA-207ENST00000413642 RTL1A6NKG5 1358 aa36.36■■■■□ 3.41
VEGFA-207ENST00000413642 CGNL1Q0VF96 1302 aa36.35■■■■□ 3.41
VEGFA-207ENST00000413642 TNS2Q63HR2 1409 aa36.35■■■■□ 3.41
VEGFA-207ENST00000413642 PSDA5PKW4 1024 aaPredicted RBP36.35■■■■□ 3.41
VEGFA-207ENST00000413642 HSP90AB2PQ58FF8 381 aa36.35■■■■□ 3.41
VEGFA-207ENST00000413642 EMILIN1Q9Y6C2 1016 aa36.34■■■■□ 3.41
VEGFA-207ENST00000413642 NBPF6Q5VWK0 638 aa36.31■■■■□ 3.4
VEGFA-207ENST00000413642 NBPF4Q96M43 638 aa36.31■■■■□ 3.4
VEGFA-207ENST00000413642 USHBP1Q8N6Y0 703 aa36.29■■■■□ 3.4
VEGFA-207ENST00000413642 BCL11BQ9C0K0 894 aaPredicted RBP36.29■■■■□ 3.4
VEGFA-207ENST00000413642 BCL9O00512 1426 aa36.28■■■■□ 3.4
VEGFA-207ENST00000413642 INSRP06213 1382 aa36.27■■■■□ 3.4
VEGFA-207ENST00000413642 FLT4P35916 1363 aa36.27■■■■□ 3.4
VEGFA-207ENST00000413642 PPM1GO15355 546 aaPredicted RBP36.26■■■■□ 3.4
VEGFA-207ENST00000413642 KIF7Q2M1P5 1343 aa36.26■■■■□ 3.39
VEGFA-207ENST00000413642 PARD3Q8TEW0 1356 aa36.26■■■■□ 3.39
VEGFA-207ENST00000413642 KCNQ2O43526 872 aa36.25■■■■□ 3.39
VEGFA-207ENST00000413642 TNNT2P45379 298 aaPredicted RBP36.25■■■■□ 3.39
VEGFA-207ENST00000413642 R3HDM1Q15032 1099 aaKnown RBP36.25■■■■□ 3.39
VEGFA-207ENST00000413642 ACSBG1Q96GR2 724 aa36.24■■■■□ 3.39
VEGFA-207ENST00000413642 DDX54Q8TDD1 881 aaKnown RBP36.23■■■■□ 3.39
VEGFA-207ENST00000413642 KIF24Q5T7B8 1368 aa36.21■■■■□ 3.39
VEGFA-207ENST00000413642 FAM208AQ9UK61 1670 aaKnown RBP36.21■■■■□ 3.39
VEGFA-207ENST00000413642 SBF2Q86WG5 1849 aa36.2■■■■□ 3.39
VEGFA-207ENST00000413642 RGPD2P0DJD1 1756 aa36.2■■■■□ 3.39
VEGFA-207ENST00000413642 SMG6Q86US8 1419 aaKnown RBP36.2■■■■□ 3.39
VEGFA-207ENST00000413642 POLKQ9UBT6 870 aa36.2■■■■□ 3.39
VEGFA-207ENST00000413642 MEGF6O75095 1541 aa36.19■■■■□ 3.38
VEGFA-207ENST00000413642 PLSCR1O15162 318 aa36.18■■■■□ 3.38
VEGFA-207ENST00000413642 PROM2Q8N271 834 aa36.15■■■■□ 3.38
VEGFA-207ENST00000413642 ZCRB1Q8TBF4 217 aaKnown RBP36.15■■■■□ 3.38
VEGFA-207ENST00000413642 WASHC2AQ641Q2 1341 aa36.14■■■■□ 3.38
VEGFA-207ENST00000413642 RREB1Q92766 1687 aa36.13■■■■□ 3.37
VEGFA-207ENST00000413642 RAPGEF4Q8WZA2 1011 aa36.11■■■■□ 3.37
VEGFA-207ENST00000413642 KNSTRNQ9Y448 316 aa36.11■■■■□ 3.37
VEGFA-207ENST00000413642 NUP188Q5SRE5 1749 aa36.11■■■■□ 3.37
VEGFA-207ENST00000413642 NBPF14Q5TI25 921 aa36.09■■■■□ 3.37
VEGFA-207ENST00000413642 TATP17735 454 aaPredicted RBP36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms