RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 LMBRD1Q9NUN5 540 aa16.65■□□□□ 0.26
CLTCL1-201ENST00000412649 NPHP1O15259 732 aa16.65■□□□□ 0.26
CLTCL1-201ENST00000412649 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
CLTCL1-201ENST00000412649 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
CLTCL1-201ENST00000412649 RPAP2Q8IXW5 612 aaPredicted RBP16.65■□□□□ 0.26
CLTCL1-201ENST00000412649 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
CLTCL1-201ENST00000412649 GOLGA6L1Q8N7Z2 621 aa16.65■□□□□ 0.26
CLTCL1-201ENST00000412649 POLR1AO95602 1720 aaPredicted RBP16.65■□□□□ 0.26
CLTCL1-201ENST00000412649 GNL2Q13823 731 aaKnown RBP16.65■□□□□ 0.26
CLTCL1-201ENST00000412649 FAM135AQ9P2D6 1515 aa16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 KIF21AQ7Z4S6 1674 aa16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 TTC22Q5TAA0 569 aa16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 ADGRL2O95490 1459 aa16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 PLB1Q6P1J6 1458 aa16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 MAGI1Q96QZ7 1491 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 MNS1Q8NEH6 495 aa16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 VGFO15240 615 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 SOX12O15370 315 aa16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 ZGPATQ8N5A5 531 aaKnown RBP16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 IBTKQ9P2D0 1353 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 MINK1Q8N4C8 1332 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-201ENST00000412649 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
CLTCL1-201ENST00000412649 FAM177BA6PVY3 158 aa16.63■□□□□ 0.25
CLTCL1-201ENST00000412649 IGSF3O75054 1194 aa16.63■□□□□ 0.25
CLTCL1-201ENST00000412649 C16orf45Q96MC5 204 aaPredicted RBP16.63■□□□□ 0.25
CLTCL1-201ENST00000412649 CALCOCO1Q9P1Z2 691 aa16.63■□□□□ 0.25
CLTCL1-201ENST00000412649 UPF3BQ9BZI7 483 aaKnown RBP16.63■□□□□ 0.25
CLTCL1-201ENST00000412649 SYNJ2O15056 1496 aa16.63■□□□□ 0.25
CLTCL1-201ENST00000412649 DMTNQ08495 405 aa16.62■□□□□ 0.25
CLTCL1-201ENST00000412649 TNMDQ9H2S6 317 aa16.62■□□□□ 0.25
CLTCL1-201ENST00000412649 TMX3Q96JJ7 454 aa16.62■□□□□ 0.25
CLTCL1-201ENST00000412649 TAOK2Q9UL54 1235 aa16.62■□□□□ 0.25
CLTCL1-201ENST00000412649 TNNT1P13805 278 aa16.62■□□□□ 0.25
CLTCL1-201ENST00000412649 PIBF1Q8WXW3 757 aa16.62■□□□□ 0.25
CLTCL1-201ENST00000412649 IL16Q14005 1332 aa16.62■□□□□ 0.25
CLTCL1-201ENST00000412649 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
CLTCL1-201ENST00000412649 UTP14CQ5TAP6 766 aaKnown RBP16.61■□□□□ 0.25
CLTCL1-201ENST00000412649 NUP62CLQ9H1M0 184 aa16.61■□□□□ 0.25
CLTCL1-201ENST00000412649 A2MP01023 1474 aa16.61■□□□□ 0.25
CLTCL1-201ENST00000412649 SMARCA5O60264 1052 aaPredicted RBP16.61■□□□□ 0.25
CLTCL1-201ENST00000412649 CWC15Q9P013 229 aaKnown RBP16.61■□□□□ 0.25
CLTCL1-201ENST00000412649 FEZ1Q99689 392 aa16.6■□□□□ 0.25
CLTCL1-201ENST00000412649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.6■□□□□ 0.25
CLTCL1-201ENST00000412649 AEBP1Q8IUX7 1158 aa16.6■□□□□ 0.25
CLTCL1-201ENST00000412649 CCAR2Q8N163 923 aaKnown RBP16.6■□□□□ 0.25
CLTCL1-201ENST00000412649 KRT85P78386 507 aa16.6■□□□□ 0.25
CLTCL1-201ENST00000412649 MAP3K11Q16584 847 aa16.6■□□□□ 0.25
CLTCL1-201ENST00000412649 FCHSD2O94868 740 aa16.59■□□□□ 0.25
CLTCL1-201ENST00000412649 ABCC2Q92887 1545 aa16.59■□□□□ 0.25
CLTCL1-201ENST00000412649 PDCP20941 246 aa16.59■□□□□ 0.25
CLTCL1-201ENST00000412649 SF3A1Q15459 793 aaKnown RBP16.59■□□□□ 0.25
CLTCL1-201ENST00000412649 RAPGEF6Q8TEU7 1601 aa16.59■□□□□ 0.25
CLTCL1-201ENST00000412649 TSC1Q92574 1164 aa16.58■□□□□ 0.25
CLTCL1-201ENST00000412649 TIGD1Q96MW7 591 aa16.58■□□□□ 0.25
CLTCL1-201ENST00000412649 CARD14Q9BXL6 1004 aa16.58■□□□□ 0.25
CLTCL1-201ENST00000412649 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.25
CLTCL1-201ENST00000412649 TSPYL1Q9H0U9 437 aa16.58■□□□□ 0.25
CLTCL1-201ENST00000412649 NOM1Q5C9Z4 860 aaKnown RBP16.58■□□□□ 0.24
CLTCL1-201ENST00000412649 LRRCC1Q9C099 1032 aa16.58■□□□□ 0.24
CLTCL1-201ENST00000412649 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 SDSP20132 328 aa16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 UBE2HP62256 183 aa16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 CCDC73Q6ZRK6 1079 aa16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 OGFRQ9NZT2 677 aa16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 USP48Q86UV5 1035 aa16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 KRT222Q8N1A0 295 aa16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 USP26Q9BXU7 913 aa16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 PTPN14Q15678 1187 aa16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
CLTCL1-201ENST00000412649 SHANK2Q9UPX8 1470 aa16.56■□□□□ 0.24
CLTCL1-201ENST00000412649 MX1P20591 662 aa16.56■□□□□ 0.24
CLTCL1-201ENST00000412649 MAGI2Q86UL8 1455 aa16.56■□□□□ 0.24
CLTCL1-201ENST00000412649 PAXBP1Q9Y5B6 917 aa16.56■□□□□ 0.24
CLTCL1-201ENST00000412649 GNAI2P04899 355 aa16.56■□□□□ 0.24
CLTCL1-201ENST00000412649 NFE2L2Q16236 605 aa16.56■□□□□ 0.24
CLTCL1-201ENST00000412649 RNF20Q5VTR2 975 aa16.56■□□□□ 0.24
CLTCL1-201ENST00000412649 ARHGAP45Q92619 1136 aa16.56■□□□□ 0.24
CLTCL1-201ENST00000412649 COG3Q96JB2 828 aa16.56■□□□□ 0.24
CLTCL1-201ENST00000412649 U2AF2P26368 475 aaKnown RBP eCLIP16.55■□□□□ 0.24
CLTCL1-201ENST00000412649 GNAI3P08754 354 aa16.55■□□□□ 0.24
CLTCL1-201ENST00000412649 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
CLTCL1-201ENST00000412649 CNTROBQ8N137 903 aa16.55■□□□□ 0.24
CLTCL1-201ENST00000412649 FBXW7Q969H0 707 aa16.55■□□□□ 0.24
CLTCL1-201ENST00000412649 NAT10Q9H0A0 1025 aaKnown RBP16.55■□□□□ 0.24
CLTCL1-201ENST00000412649 GIMAP6Q6P9H5 292 aa16.55■□□□□ 0.24
CLTCL1-201ENST00000412649 C17orf53Q8N3J3 647 aaPredicted RBP16.55■□□□□ 0.24
CLTCL1-201ENST00000412649 CD2BP2O95400 341 aaKnown RBP16.54■□□□□ 0.24
CLTCL1-201ENST00000412649 CAMK4Q16566 473 aa16.54■□□□□ 0.24
CLTCL1-201ENST00000412649 BCL2L12Q9HB09 334 aa16.54■□□□□ 0.24
CLTCL1-201ENST00000412649 ADGBQ8N7X0 1667 aa16.54■□□□□ 0.24
CLTCL1-201ENST00000412649 SRCIN1Q9C0H9 1055 aa16.54■□□□□ 0.24
CLTCL1-201ENST00000412649 RIOK3O14730 519 aaKnown RBP16.53■□□□□ 0.24
CLTCL1-201ENST00000412649 LARP1BQ659C4 914 aaKnown RBP16.53■□□□□ 0.24
CLTCL1-201ENST00000412649 FILIP1Q7Z7B0 1213 aa16.53■□□□□ 0.24
CLTCL1-201ENST00000412649 KDM4AO75164 1064 aa16.53■□□□□ 0.24
CLTCL1-201ENST00000412649 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
CLTCL1-201ENST00000412649 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
CLTCL1-201ENST00000412649 TRERF1Q96PN7 1200 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms