RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 TXNDC2Q86VQ3 553 aa16.58■□□□□ 0.24
CLINT1-201ENST00000411809 USP31Q70CQ4 1352 aa16.58■□□□□ 0.24
CLINT1-201ENST00000411809 PIK3R4Q99570 1358 aa16.58■□□□□ 0.24
CLINT1-201ENST00000411809 ZNF853P0CG23 659 aa16.57■□□□□ 0.24
CLINT1-201ENST00000411809 LTKP29376 864 aa16.57■□□□□ 0.24
CLINT1-201ENST00000411809 FBLN1P23142 703 aa16.57■□□□□ 0.24
CLINT1-201ENST00000411809 EXOSC9Q06265 439 aaKnown RBP16.57■□□□□ 0.24
CLINT1-201ENST00000411809 NCKAP5LQ9HCH0 1330 aa16.57■□□□□ 0.24
CLINT1-201ENST00000411809 NME9Q86XW9 330 aa16.57■□□□□ 0.24
CLINT1-201ENST00000411809 CCDC61Q9Y6R9 512 aa16.57■□□□□ 0.24
CLINT1-201ENST00000411809 USP6P35125 1406 aa16.56■□□□□ 0.24
CLINT1-201ENST00000411809 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
CLINT1-201ENST00000411809 PNNQ9H307 717 aaKnown RBP16.56■□□□□ 0.24
CLINT1-201ENST00000411809 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
CLINT1-201ENST00000411809 U2SURPO15042 1029 aaKnown RBP16.55■□□□□ 0.24
CLINT1-201ENST00000411809 SSH1Q8WYL5 1049 aa16.55■□□□□ 0.24
CLINT1-201ENST00000411809 ZRANB1Q9UGI0 708 aa16.55■□□□□ 0.24
CLINT1-201ENST00000411809 RIPK4P57078 832 aa16.55■□□□□ 0.24
CLINT1-201ENST00000411809 BECN1Q14457 450 aa16.55■□□□□ 0.24
CLINT1-201ENST00000411809 PHACTR3Q96KR7 559 aa16.55■□□□□ 0.24
CLINT1-201ENST00000411809 PLEKHG3A1L390 1219 aa16.55■□□□□ 0.24
CLINT1-201ENST00000411809 TRIM27P14373 513 aa16.54■□□□□ 0.24
CLINT1-201ENST00000411809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
CLINT1-201ENST00000411809 EMILIN1Q9Y6C2 1016 aa16.54■□□□□ 0.24
CLINT1-201ENST00000411809 MAPK8IP3Q9UPT6 1336 aa16.54■□□□□ 0.24
CLINT1-201ENST00000411809 HDGFP51858 240 aaKnown RBP16.54■□□□□ 0.24
CLINT1-201ENST00000411809 ALDH1L2Q3SY69 923 aa16.54■□□□□ 0.24
CLINT1-201ENST00000411809 ZKSCAN2Q63HK3 967 aa16.54■□□□□ 0.24
CLINT1-201ENST00000411809 PMFBP1Q8TBY8 1022 aa16.54■□□□□ 0.24
CLINT1-201ENST00000411809 NFE2L2Q16236 605 aa16.53■□□□□ 0.24
CLINT1-201ENST00000411809 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
CLINT1-201ENST00000411809 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
CLINT1-201ENST00000411809 FAM43AQ8N2R8 423 aa16.52■□□□□ 0.24
CLINT1-201ENST00000411809 CHD2O14647 1828 aaKnown RBP16.52■□□□□ 0.24
CLINT1-201ENST00000411809 HDAC1Q13547 482 aaPredicted RBP16.51■□□□□ 0.23
CLINT1-201ENST00000411809 DZIP1LQ8IYY4 767 aaKnown RBP16.51■□□□□ 0.23
CLINT1-201ENST00000411809 RRAGDQ9NQL2 400 aaPredicted RBP16.51■□□□□ 0.23
CLINT1-201ENST00000411809 ATF7IPQ6VMQ6 1270 aa16.51■□□□□ 0.23
CLINT1-201ENST00000411809 ZNF428Q96B54 188 aa16.51■□□□□ 0.23
CLINT1-201ENST00000411809 UPF2Q9HAU5 1272 aaKnown RBP16.51■□□□□ 0.23
CLINT1-201ENST00000411809 N4BP2Q86UW6 1770 aaPredicted RBP16.49■□□□□ 0.23
CLINT1-201ENST00000411809 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
CLINT1-201ENST00000411809 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
CLINT1-201ENST00000411809 CEP170BQ9Y4F5 1589 aaPredicted RBP16.49■□□□□ 0.23
CLINT1-201ENST00000411809 TTC21BQ7Z4L5 1316 aa16.49■□□□□ 0.23
CLINT1-201ENST00000411809 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
CLINT1-201ENST00000411809 NOB1Q9ULX3 412 aaKnown RBP16.48■□□□□ 0.23
CLINT1-201ENST00000411809 UBE2Q2Q8WVN8 375 aa16.48■□□□□ 0.23
CLINT1-201ENST00000411809 VAMP4O75379 141 aa16.47■□□□□ 0.23
CLINT1-201ENST00000411809 TBC1D2Q9BYX2 928 aa16.47■□□□□ 0.23
CLINT1-201ENST00000411809 PANK2Q9BZ23 570 aa16.47■□□□□ 0.23
CLINT1-201ENST00000411809 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
CLINT1-201ENST00000411809 PHRF1Q9P1Y6 1649 aaKnown RBP16.46■□□□□ 0.23
CLINT1-201ENST00000411809 KIF16BQ96L93 1317 aa16.46■□□□□ 0.23
CLINT1-201ENST00000411809 PDZRN3Q9UPQ7 1066 aa16.46■□□□□ 0.23
CLINT1-201ENST00000411809 ACEP12821 1306 aa16.46■□□□□ 0.23
CLINT1-201ENST00000411809 TBX22Q9Y458 520 aa16.46■□□□□ 0.23
CLINT1-201ENST00000411809 RGS12O14924 1447 aa16.45■□□□□ 0.22
CLINT1-201ENST00000411809 ANKARQ7Z5J8 1434 aa16.45■□□□□ 0.22
CLINT1-201ENST00000411809 COG3Q96JB2 828 aa16.45■□□□□ 0.22
CLINT1-201ENST00000411809 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
CLINT1-201ENST00000411809 MRPL50Q8N5N7 158 aaKnown RBP16.45■□□□□ 0.22
CLINT1-201ENST00000411809 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
CLINT1-201ENST00000411809 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
CLINT1-201ENST00000411809 NAP1L5Q96NT1 182 aaPredicted RBP16.44■□□□□ 0.22
CLINT1-201ENST00000411809 DDX19BQ9UMR2 479 aa16.44■□□□□ 0.22
CLINT1-201ENST00000411809 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
CLINT1-201ENST00000411809 RWDD1Q9H446 243 aaPredicted RBP16.44■□□□□ 0.22
CLINT1-201ENST00000411809 ESF1Q9H501 851 aaKnown RBP16.44■□□□□ 0.22
CLINT1-201ENST00000411809 ABCC4O15439 1325 aa16.44■□□□□ 0.22
CLINT1-201ENST00000411809 HMOX1P09601 288 aa16.44■□□□□ 0.22
CLINT1-201ENST00000411809 RRS1Q15050 365 aaKnown RBP16.44■□□□□ 0.22
CLINT1-201ENST00000411809 MBIPQ9NS73 344 aa16.43■□□□□ 0.22
CLINT1-201ENST00000411809 KDRP35968 1356 aa16.43■□□□□ 0.22
CLINT1-201ENST00000411809 CRB1P82279 1406 aa16.43■□□□□ 0.22
CLINT1-201ENST00000411809 ADAMTSL3P82987 1691 aa16.43■□□□□ 0.22
CLINT1-201ENST00000411809 EIF4A2Q14240 407 aaKnown RBP16.42■□□□□ 0.22
CLINT1-201ENST00000411809 CFAP44Q96MT7 982 aa16.42■□□□□ 0.22
CLINT1-201ENST00000411809 FAM208AQ9UK61 1670 aaKnown RBP16.42■□□□□ 0.22
CLINT1-201ENST00000411809 ARHGEF10O15013 1369 aa16.42■□□□□ 0.22
CLINT1-201ENST00000411809 XRCC6P12956 609 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLINT1-201ENST00000411809 TSPYL6Q8N831 410 aa16.42■□□□□ 0.22
CLINT1-201ENST00000411809 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
CLINT1-201ENST00000411809 CEBPAP49715 358 aaPredicted RBP16.41■□□□□ 0.22
CLINT1-201ENST00000411809 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
CLINT1-201ENST00000411809 ANTXR1Q9H6X2 564 aa16.41■□□□□ 0.22
CLINT1-201ENST00000411809 LTN1O94822 1766 aa16.41■□□□□ 0.22
CLINT1-201ENST00000411809 KIF24Q5T7B8 1368 aa16.41■□□□□ 0.22
CLINT1-201ENST00000411809 TTC21AQ8NDW8 1320 aa16.41■□□□□ 0.22
CLINT1-201ENST00000411809 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
CLINT1-201ENST00000411809 ZBTB7BO15156 539 aaPredicted RBP16.4■□□□□ 0.22
CLINT1-201ENST00000411809 GNAI1P63096 354 aa16.4■□□□□ 0.22
CLINT1-201ENST00000411809 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
CLINT1-201ENST00000411809 TBC1D32Q96NH3 1257 aa16.4■□□□□ 0.22
CLINT1-201ENST00000411809 FTSJ3Q8IY81 847 aaKnown RBP16.39■□□□□ 0.21
CLINT1-201ENST00000411809 TUBGCP6Q96RT7 1819 aa16.38■□□□□ 0.21
CLINT1-201ENST00000411809 AMOTL2Q9Y2J4 779 aa16.38■□□□□ 0.21
CLINT1-201ENST00000411809 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
CLINT1-201ENST00000411809 IPO8O15397 1037 aaKnown RBP16.37■□□□□ 0.21
CLINT1-201ENST00000411809 SBNO1A3KN83 1393 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms