RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ROCK2O75116 1388 aaKnown RBP23.91■■□□□ 1.42
MRPL55-220ENST00000411464 NEUROD1Q13562 356 aa23.91■■□□□ 1.42
MRPL55-220ENST00000411464 PARP4Q9UKK3 1724 aaKnown RBP23.9■■□□□ 1.42
MRPL55-220ENST00000411464 TTC21AQ8NDW8 1320 aa23.9■■□□□ 1.42
MRPL55-220ENST00000411464 CARD10Q9BWT7 1032 aa23.9■■□□□ 1.42
MRPL55-220ENST00000411464 MARCH10Q8NA82 808 aaPredicted RBP23.89■■□□□ 1.41
MRPL55-220ENST00000411464 CPSF1Q10570 1443 aaKnown RBP23.89■■□□□ 1.41
MRPL55-220ENST00000411464 RREB1Q92766 1687 aa23.89■■□□□ 1.41
MRPL55-220ENST00000411464 DCAF8L1A6NGE4 600 aa23.88■■□□□ 1.41
MRPL55-220ENST00000411464 EXOC5O00471 708 aa23.87■■□□□ 1.41
MRPL55-220ENST00000411464 PTF1AQ7RTS3 328 aa23.87■■□□□ 1.41
MRPL55-220ENST00000411464 NUP188Q5SRE5 1749 aa23.87■■□□□ 1.41
MRPL55-220ENST00000411464 KTN1Q86UP2 1357 aaKnown RBP23.85■■□□□ 1.41
MRPL55-220ENST00000411464 YY1P25490 414 aa23.84■■□□□ 1.41
MRPL55-220ENST00000411464 PIK3C2AO00443 1686 aa23.83■■□□□ 1.41
MRPL55-220ENST00000411464 PROM2Q8N271 834 aa23.83■■□□□ 1.41
MRPL55-220ENST00000411464 ANO8Q9HCE9 1232 aaPredicted RBP23.83■■□□□ 1.41
MRPL55-220ENST00000411464 BCL9O00512 1426 aa23.83■■□□□ 1.4
MRPL55-220ENST00000411464 PEAK1Q9H792 1746 aa23.81■■□□□ 1.4
MRPL55-220ENST00000411464 TRPM1Q7Z4N2 1603 aa23.81■■□□□ 1.4
MRPL55-220ENST00000411464 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.4
MRPL55-220ENST00000411464 LRRC37A3O60309 1634 aa23.81■■□□□ 1.4
MRPL55-220ENST00000411464 CCDC7Q96M83 1385 aa23.8■■□□□ 1.4
MRPL55-220ENST00000411464 NINLQ9Y2I6 1382 aa23.8■■□□□ 1.4
MRPL55-220ENST00000411464 COL18A1P39060 1754 aa23.8■■□□□ 1.4
MRPL55-220ENST00000411464 TXNRD1Q16881 649 aa23.79■■□□□ 1.4
MRPL55-220ENST00000411464 STK32BQ9NY57 414 aa23.78■■□□□ 1.4
MRPL55-220ENST00000411464 TMC1Q8TDI8 760 aa23.77■■□□□ 1.4
MRPL55-220ENST00000411464 NLRP2Q9NX02 1062 aa23.77■■□□□ 1.4
MRPL55-220ENST00000411464 ZBTB7AO95365 584 aa23.76■■□□□ 1.39
MRPL55-220ENST00000411464 CARD11Q9BXL7 1154 aa23.76■■□□□ 1.39
MRPL55-220ENST00000411464 PDGFDQ9GZP0 370 aaPredicted RBP23.76■■□□□ 1.39
MRPL55-220ENST00000411464 HDGFL2Q7Z4V5 671 aaPredicted RBP23.75■■□□□ 1.39
MRPL55-220ENST00000411464 NME9Q86XW9 330 aa23.75■■□□□ 1.39
MRPL55-220ENST00000411464 USP31Q70CQ4 1352 aa23.75■■□□□ 1.39
MRPL55-220ENST00000411464 NFAT5O94916 1531 aa23.74■■□□□ 1.39
MRPL55-220ENST00000411464 SLC15A2Q16348 729 aa23.73■■□□□ 1.39
MRPL55-220ENST00000411464 ATF5Q9Y2D1 282 aaPredicted RBP23.73■■□□□ 1.39
MRPL55-220ENST00000411464 SBNO2Q9Y2G9 1366 aa23.73■■□□□ 1.39
MRPL55-220ENST00000411464 RGPD3A6NKT7 1758 aaPredicted RBP23.73■■□□□ 1.39
MRPL55-220ENST00000411464 RGPD4Q7Z3J3 1758 aa23.73■■□□□ 1.39
MRPL55-220ENST00000411464 ERBB3P21860 1342 aa23.72■■□□□ 1.39
MRPL55-220ENST00000411464 TNS2Q63HR2 1409 aa23.71■■□□□ 1.39
MRPL55-220ENST00000411464 IL2RBP14784 551 aa23.71■■□□□ 1.39
MRPL55-220ENST00000411464 ACSBG1Q96GR2 724 aa23.71■■□□□ 1.39
MRPL55-220ENST00000411464 SLC12A5Q9H2X9 1139 aa23.71■■□□□ 1.39
MRPL55-220ENST00000411464 TERF2IPQ9NYB0 399 aa23.7■■□□□ 1.38
MRPL55-220ENST00000411464 SBF2Q86WG5 1849 aa23.7■■□□□ 1.38
MRPL55-220ENST00000411464 ABCC6O95255 1503 aa23.69■■□□□ 1.38
MRPL55-220ENST00000411464 PTGER2P43116 358 aa23.69■■□□□ 1.38
MRPL55-220ENST00000411464 ANKRD24Q8TF21 1146 aa23.69■■□□□ 1.38
MRPL55-220ENST00000411464 AKAP12Q02952 1782 aa23.69■■□□□ 1.38
MRPL55-220ENST00000411464 MTFR1LQ9H019 292 aa23.66■■□□□ 1.38
MRPL55-220ENST00000411464 CD163L1Q9NR16 1453 aa23.65■■□□□ 1.38
MRPL55-220ENST00000411464 WNK3Q9BYP7 1800 aa23.65■■□□□ 1.38
MRPL55-220ENST00000411464 PUS7Q96PZ0 661 aaKnown RBP23.64■■□□□ 1.37
MRPL55-220ENST00000411464 RGPD5Q99666 1765 aa23.64■■□□□ 1.37
MRPL55-220ENST00000411464 EDC4Q6P2E9 1401 aaKnown RBP23.64■■□□□ 1.37
MRPL55-220ENST00000411464 FHDC1Q9C0D6 1143 aaPredicted RBP23.63■■□□□ 1.37
MRPL55-220ENST00000411464 CASZ1Q86V15 1759 aa23.63■■□□□ 1.37
MRPL55-220ENST00000411464 SYT17Q9BSW7 474 aa23.62■■□□□ 1.37
MRPL55-220ENST00000411464 IP6K1Q92551 441 aa23.61■■□□□ 1.37
MRPL55-220ENST00000411464 MON2Q7Z3U7 1717 aa23.6■■□□□ 1.37
MRPL55-220ENST00000411464 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
MRPL55-220ENST00000411464 LTV1Q96GA3 475 aaPredicted RBP23.6■■□□□ 1.37
MRPL55-220ENST00000411464 A0A1W2PP64 1363 aa23.6■■□□□ 1.37
MRPL55-220ENST00000411464 TONSLQ96HA7 1378 aa23.6■■□□□ 1.37
MRPL55-220ENST00000411464 ARXQ96QS3 562 aa23.58■■□□□ 1.37
MRPL55-220ENST00000411464 SGIP1Q9BQI5 828 aa23.58■■□□□ 1.37
MRPL55-220ENST00000411464 COG3Q96JB2 828 aa23.57■■□□□ 1.36
MRPL55-220ENST00000411464 LRRC4BQ9NT99 713 aa23.56■■□□□ 1.36
MRPL55-220ENST00000411464 SLC24A1O60721 1099 aa23.55■■□□□ 1.36
MRPL55-220ENST00000411464 NHSQ6T4R5 1651 aa23.54■■□□□ 1.36
MRPL55-220ENST00000411464 ZNF827Q17R98 1081 aa23.54■■□□□ 1.36
MRPL55-220ENST00000411464 SLC27A3Q5K4L6 730 aa23.54■■□□□ 1.36
MRPL55-220ENST00000411464 AMPHP49418 695 aa23.53■■□□□ 1.36
MRPL55-220ENST00000411464 SYTL4Q96C24 671 aaPredicted RBP23.53■■□□□ 1.36
MRPL55-220ENST00000411464 MYOM1P52179 1685 aa23.53■■□□□ 1.36
MRPL55-220ENST00000411464 USP54Q70EL1 1684 aa23.53■■□□□ 1.36
MRPL55-220ENST00000411464 ST20-MTHFSA0A0A6YYL1 179 aa23.52■■□□□ 1.36
MRPL55-220ENST00000411464 HOXC9P31274 260 aa23.51■■□□□ 1.35
MRPL55-220ENST00000411464 TESK2Q96S53 571 aa23.51■■□□□ 1.35
MRPL55-220ENST00000411464 MAP3K19Q56UN5 1328 aa23.51■■□□□ 1.35
MRPL55-220ENST00000411464 PRIM1P49642 420 aaKnown RBP23.5■■□□□ 1.35
MRPL55-220ENST00000411464 ZNF784Q8NCA9 323 aaPredicted RBP23.5■■□□□ 1.35
MRPL55-220ENST00000411464 SLC16A10Q8TF71 515 aa23.5■■□□□ 1.35
MRPL55-220ENST00000411464 AKT1S1Q96B36 256 aa23.5■■□□□ 1.35
MRPL55-220ENST00000411464 TFCP2L1Q9NZI6 479 aa23.49■■□□□ 1.35
MRPL55-220ENST00000411464 LTN1O94822 1766 aa23.49■■□□□ 1.35
MRPL55-220ENST00000411464 FBLN1P23142 703 aa23.48■■□□□ 1.35
MRPL55-220ENST00000411464 ZCRB1Q8TBF4 217 aaKnown RBP23.48■■□□□ 1.35
MRPL55-220ENST00000411464 POLD1P28340 1107 aa23.47■■□□□ 1.35
MRPL55-220ENST00000411464 MAP3K5Q99683 1374 aa23.46■■□□□ 1.35
MRPL55-220ENST00000411464 ANKRD36BQ8N2N9 1353 aa23.45■■□□□ 1.34
MRPL55-220ENST00000411464 KCNQ4P56696 695 aa23.45■■□□□ 1.34
MRPL55-220ENST00000411464 GPR162Q16538 588 aa23.45■■□□□ 1.34
MRPL55-220ENST00000411464 KLHL34Q8N239 644 aa23.45■■□□□ 1.34
MRPL55-220ENST00000411464 PAPPAQ13219 1627 aa23.44■■□□□ 1.34
MRPL55-220ENST00000411464 BTAF1O14981 1849 aa23.44■■□□□ 1.34
MRPL55-220ENST00000411464 PNPLA7Q6ZV29 1317 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms