RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 PTK2Q05397 1052 aa4.83□□□□□ -1.64
RNU2-54P-201ENST00000410299 TMEM259Q4ZIN3 620 aa4.83□□□□□ -1.64
RNU2-54P-201ENST00000410299 MRPL14Q6P1L8 145 aaKnown RBP4.83□□□□□ -1.64
RNU2-54P-201ENST00000410299 ZBTB33Q86T24 672 aa4.83□□□□□ -1.64
RNU2-54P-201ENST00000410299 ADAM32Q8TC27 787 aa4.83□□□□□ -1.64
RNU2-54P-201ENST00000410299 PURBQ96QR8 312 aaKnown RBP4.83□□□□□ -1.64
RNU2-54P-201ENST00000410299 TRIM34Q9BYJ4 488 aa4.83□□□□□ -1.64
RNU2-54P-201ENST00000410299 ZC3H4Q9UPT8 1303 aaKnown RBP4.82□□□□□ -1.64
RNU2-54P-201ENST00000410299 CCDC116Q8IYX3 515 aa4.82□□□□□ -1.64
RNU2-54P-201ENST00000410299 SLC10A4Q96EP9 437 aa4.82□□□□□ -1.64
RNU2-54P-201ENST00000410299 KCTD15Q96SI1 283 aaPredicted RBP4.82□□□□□ -1.64
RNU2-54P-201ENST00000410299 SCARF1Q14162 830 aa4.81□□□□□ -1.64
RNU2-54P-201ENST00000410299 C6orf118Q5T5N4 469 aa4.81□□□□□ -1.64
RNU2-54P-201ENST00000410299 PNMA1Q8ND90 353 aa4.81□□□□□ -1.64
RNU2-54P-201ENST00000410299 GJD4Q96KN9 370 aaPredicted RBP4.81□□□□□ -1.64
RNU2-54P-201ENST00000410299 GPSM3Q9Y4H4 160 aa4.81□□□□□ -1.64
RNU2-54P-201ENST00000410299 SOBPA7XYQ1 873 aa4.8□□□□□ -1.64
RNU2-54P-201ENST00000410299 TERTO14746 1132 aaKnown RBP4.8□□□□□ -1.64
RNU2-54P-201ENST00000410299 PPP1R26Q5T8A7 1209 aaPredicted RBP4.8□□□□□ -1.64
RNU2-54P-201ENST00000410299 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
RNU2-54P-201ENST00000410299 MEIOBQ8N635 442 aa4.8□□□□□ -1.64
RNU2-54P-201ENST00000410299 EMILIN1Q9Y6C2 1016 aa4.8□□□□□ -1.64
RNU2-54P-201ENST00000410299 BMP2P12643 396 aa4.79□□□□□ -1.64
RNU2-54P-201ENST00000410299 VEGFBP49765 207 aa4.79□□□□□ -1.64
RNU2-54P-201ENST00000410299 RAB15P59190 212 aa4.79□□□□□ -1.64
RNU2-54P-201ENST00000410299 CBLBQ13191 982 aa4.79□□□□□ -1.64
RNU2-54P-201ENST00000410299 INTS6LQ5JSJ4 861 aaKnown RBP4.79□□□□□ -1.64
RNU2-54P-201ENST00000410299 LINC00528Q8N1L1 170 aa4.79□□□□□ -1.64
RNU2-54P-201ENST00000410299 SNRKQ9NRH2 765 aa4.79□□□□□ -1.64
RNU2-54P-201ENST00000410299 CDV3Q9UKY7 258 aaKnown RBP4.79□□□□□ -1.64
RNU2-54P-201ENST00000410299 UPP2O95045 317 aa4.78□□□□□ -1.64
RNU2-54P-201ENST00000410299 DZIP3Q86Y13 1208 aaKnown RBP4.78□□□□□ -1.64
RNU2-54P-201ENST00000410299 MTMR14Q8NCE2 650 aa4.78□□□□□ -1.64
RNU2-54P-201ENST00000410299 SLC16A10Q8TF71 515 aa4.78□□□□□ -1.64
RNU2-54P-201ENST00000410299 PGPEP1Q9NXJ5 209 aa4.78□□□□□ -1.64
RNU2-54P-201ENST00000410299 NXF1Q9UBU9 619 aaKnown RBP4.78□□□□□ -1.64
RNU2-54P-201ENST00000410299 ZBBXA8MT70 800 aa4.77□□□□□ -1.65
RNU2-54P-201ENST00000410299 MAN1A2O60476 641 aa4.77□□□□□ -1.65
RNU2-54P-201ENST00000410299 FBXO45P0C2W1 286 aa4.77□□□□□ -1.65
RNU2-54P-201ENST00000410299 SUZ12Q15022 739 aaKnown RBP4.77□□□□□ -1.65
RNU2-54P-201ENST00000410299 NBPF20Q3BBV1 942 aa4.77□□□□□ -1.65
RNU2-54P-201ENST00000410299 BANK1Q8NDB2 785 aa4.77□□□□□ -1.65
RNU2-54P-201ENST00000410299 AGBL1Q96MI9 1066 aa4.77□□□□□ -1.65
RNU2-54P-201ENST00000410299 TSEN34Q9BSV6 310 aaKnown RBP4.77□□□□□ -1.65
RNU2-54P-201ENST00000410299 TMPRSS4Q9NRS4 437 aa4.77□□□□□ -1.65
RNU2-54P-201ENST00000410299 GPR37L1O60883 481 aa4.76□□□□□ -1.65
RNU2-54P-201ENST00000410299 DHX9Q08211 1270 aaKnown RBP4.76□□□□□ -1.65
RNU2-54P-201ENST00000410299 Q6ZVU0 165 aa4.76□□□□□ -1.65
RNU2-54P-201ENST00000410299 ZSCAN1Q8NBB4 408 aa4.76□□□□□ -1.65
RNU2-54P-201ENST00000410299 PCDHB9Q9Y5E1 797 aa4.76□□□□□ -1.65
RNU2-54P-201ENST00000410299 SOS2Q07890 1332 aaPredicted RBP4.75□□□□□ -1.65
RNU2-54P-201ENST00000410299 ESPNB1AK53 854 aa4.75□□□□□ -1.65
RNU2-54P-201ENST00000410299 ERVH48-1M5A8F1 160 aa4.75□□□□□ -1.65
RNU2-54P-201ENST00000410299 ZNF784Q8NCA9 323 aaPredicted RBP4.75□□□□□ -1.65
RNU2-54P-201ENST00000410299 DNMT3LQ9UJW3 386 aa4.75□□□□□ -1.65
RNU2-54P-201ENST00000410299 FIGNL2A6NMB9 653 aa4.74□□□□□ -1.65
RNU2-54P-201ENST00000410299 TTLL8A6PVC2 850 aa4.74□□□□□ -1.65
RNU2-54P-201ENST00000410299 H3BM21 787 aa4.74□□□□□ -1.65
RNU2-54P-201ENST00000410299 LILRA1O75019 489 aa4.74□□□□□ -1.65
RNU2-54P-201ENST00000410299 GIGYF1O75420 1035 aaPredicted RBP4.74□□□□□ -1.65
RNU2-54P-201ENST00000410299 RELBQ01201 579 aa4.74□□□□□ -1.65
RNU2-54P-201ENST00000410299 NDUFB9Q9Y6M9 179 aa4.74□□□□□ -1.65
RNU2-54P-201ENST00000410299 ERBB4Q15303 1308 aa4.73□□□□□ -1.65
RNU2-54P-201ENST00000410299 SPINT1O43278 529 aa4.73□□□□□ -1.65
RNU2-54P-201ENST00000410299 ADD1P35611 737 aaKnown RBP4.73□□□□□ -1.65
RNU2-54P-201ENST00000410299 GMPRP36959 345 aa4.73□□□□□ -1.65
RNU2-54P-201ENST00000410299 NR1H3Q13133 447 aa4.73□□□□□ -1.65
RNU2-54P-201ENST00000410299 NPAS3Q8IXF0 933 aa4.73□□□□□ -1.65
RNU2-54P-201ENST00000410299 INSM2Q96T92 566 aaPredicted RBP4.73□□□□□ -1.65
RNU2-54P-201ENST00000410299 ZNF395Q9H8N7 513 aaPredicted RBP4.73□□□□□ -1.65
RNU2-54P-201ENST00000410299 CYLDQ9NQC7 956 aa4.73□□□□□ -1.65
RNU2-54P-201ENST00000410299 TBC1D2BQ9UPU7 963 aa4.73□□□□□ -1.65
RNU2-54P-201ENST00000410299 SOCS7O14512 581 aa4.72□□□□□ -1.65
RNU2-54P-201ENST00000410299 CTSOP43234 321 aaPredicted RBP4.72□□□□□ -1.65
RNU2-54P-201ENST00000410299 SEPT12Q8IYM1 358 aa4.72□□□□□ -1.65
RNU2-54P-201ENST00000410299 KDF1Q8NAX2 398 aaPredicted RBP4.72□□□□□ -1.65
RNU2-54P-201ENST00000410299 IRF7Q92985 503 aa4.72□□□□□ -1.65
RNU2-54P-201ENST00000410299 APBB1O00213 710 aa4.71□□□□□ -1.66
RNU2-54P-201ENST00000410299 PPFIA3O75145 1194 aa4.71□□□□□ -1.66
RNU2-54P-201ENST00000410299 ADH1AP07327 375 aa4.71□□□□□ -1.66
RNU2-54P-201ENST00000410299 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.71□□□□□ -1.66
RNU2-54P-201ENST00000410299 PTGIRP43119 386 aa4.7□□□□□ -1.66
RNU2-54P-201ENST00000410299 PTSQ03393 145 aa4.7□□□□□ -1.66
RNU2-54P-201ENST00000410299 POLMQ9NP87 494 aaPredicted RBP4.7□□□□□ -1.66
RNU2-54P-201ENST00000410299 SCTRP47872 440 aa4.69□□□□□ -1.66
RNU2-54P-201ENST00000410299 IRF5Q13568 498 aa4.69□□□□□ -1.66
RNU2-54P-201ENST00000410299 RNF217Q8TC41 542 aa4.69□□□□□ -1.66
RNU2-54P-201ENST00000410299 GDPD2Q9HCC8 539 aa4.69□□□□□ -1.66
RNU2-54P-201ENST00000410299 ZNF330Q9Y3S2 320 aaPredicted RBP4.69□□□□□ -1.66
RNU2-54P-201ENST00000410299 VSIG8P0DPA2 414 aa4.68□□□□□ -1.66
RNU2-54P-201ENST00000410299 MCCD1P59942 119 aaPredicted RBP4.68□□□□□ -1.66
RNU2-54P-201ENST00000410299 RNF20Q5VTR2 975 aa4.68□□□□□ -1.66
RNU2-54P-201ENST00000410299 FOXD4L5Q5VV16 416 aaPredicted RBP4.68□□□□□ -1.66
RNU2-54P-201ENST00000410299 CEP126Q9P2H0 1117 aa4.68□□□□□ -1.66
RNU2-54P-201ENST00000410299 PCDHB11Q9Y5F2 797 aa4.68□□□□□ -1.66
RNU2-54P-201ENST00000410299 A0A1W2PRU2 124 aa4.67□□□□□ -1.66
RNU2-54P-201ENST00000410299 ATP5J2-PTCD1G3V325 749 aa4.67□□□□□ -1.66
RNU2-54P-201ENST00000410299 ABL2P42684 1182 aa4.67□□□□□ -1.66
RNU2-54P-201ENST00000410299 ERVK-9P63128 1117 aa4.67□□□□□ -1.66
RNU2-54P-201ENST00000410299 MCM6Q14566 821 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms