RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 CPS1P31327 1500 aa20.09■□□□□ 0.81
HOXD3-202ENST00000410016 CALD1Q05682 793 aaKnown RBP20.09■□□□□ 0.81
HOXD3-202ENST00000410016 MRPL50Q8N5N7 158 aaKnown RBP20.09■□□□□ 0.81
HOXD3-202ENST00000410016 ARHGAP45Q92619 1136 aa20.09■□□□□ 0.81
HOXD3-202ENST00000410016 TBC1D2Q9BYX2 928 aa20.09■□□□□ 0.81
HOXD3-202ENST00000410016 ZBTB7BO15156 539 aaPredicted RBP20.08■□□□□ 0.81
HOXD3-202ENST00000410016 GNAI1P63096 354 aa20.08■□□□□ 0.81
HOXD3-202ENST00000410016 NUCB1Q02818 461 aa20.08■□□□□ 0.81
HOXD3-202ENST00000410016 COG3Q96JB2 828 aa20.08■□□□□ 0.81
HOXD3-202ENST00000410016 MBIPQ9NS73 344 aa20.08■□□□□ 0.8
HOXD3-202ENST00000410016 RRS1Q15050 365 aaKnown RBP20.07■□□□□ 0.8
HOXD3-202ENST00000410016 PIK3R4Q99570 1358 aa20.07■□□□□ 0.8
HOXD3-202ENST00000410016 PRR36Q9H6K5 1346 aa20.06■□□□□ 0.8
HOXD3-202ENST00000410016 HDGFP51858 240 aaKnown RBP20.06■□□□□ 0.8
HOXD3-202ENST00000410016 CFAP44Q96MT7 982 aa20.05■□□□□ 0.8
HOXD3-202ENST00000410016 ZNF692Q9BU19 519 aaPredicted RBP20.05■□□□□ 0.8
HOXD3-202ENST00000410016 SLKQ9H2G2 1235 aaPredicted RBP20.05■□□□□ 0.8
HOXD3-202ENST00000410016 PTCH1Q13635 1447 aa20.05■□□□□ 0.8
HOXD3-202ENST00000410016 C22orf23Q9BZE7 217 aa20.05■□□□□ 0.8
HOXD3-202ENST00000410016 KNDC1Q76NI1 1749 aa20.03■□□□□ 0.8
HOXD3-202ENST00000410016 MON2Q7Z3U7 1717 aa20.03■□□□□ 0.8
HOXD3-202ENST00000410016 ESF1Q9H501 851 aaKnown RBP20.03■□□□□ 0.8
HOXD3-202ENST00000410016 ELL2O00472 640 aaPredicted RBP20.02■□□□□ 0.8
HOXD3-202ENST00000410016 CHD1LQ86WJ1 897 aa20.02■□□□□ 0.8
HOXD3-202ENST00000410016 C8orf58Q8NAV2 365 aa20.02■□□□□ 0.8
HOXD3-202ENST00000410016 MFAP1P55081 439 aaKnown RBP20.02■□□□□ 0.8
HOXD3-202ENST00000410016 ROBO2Q9HCK4 1378 aa20.02■□□□□ 0.79
HOXD3-202ENST00000410016 TMEM2Q9UHN6 1383 aa20.02■□□□□ 0.79
HOXD3-202ENST00000410016 C3P01024 1663 aa20.02■□□□□ 0.79
HOXD3-202ENST00000410016 FAM83GA6ND36 823 aa20.01■□□□□ 0.79
HOXD3-202ENST00000410016 LMOD3Q0VAK6 560 aa20.01■□□□□ 0.79
HOXD3-202ENST00000410016 TWISTNBQ3B726 338 aaPredicted RBP20.01■□□□□ 0.79
HOXD3-202ENST00000410016 IL27Q8NEV9 243 aa20.01■□□□□ 0.79
HOXD3-202ENST00000410016 LNPKQ9C0E8 428 aa20.01■□□□□ 0.79
HOXD3-202ENST00000410016 ABCC4O15439 1325 aa20.01■□□□□ 0.79
HOXD3-202ENST00000410016 TNRQ92752 1358 aa20.01■□□□□ 0.79
HOXD3-202ENST00000410016 CHMP4BQ9H444 224 aaKnown RBP20■□□□□ 0.79
HOXD3-202ENST00000410016 SIRT2Q8IXJ6 389 aa19.99■□□□□ 0.79
HOXD3-202ENST00000410016 AKAP12Q02952 1782 aa19.99■□□□□ 0.79
HOXD3-202ENST00000410016 ADAMTS13Q76LX8 1427 aa19.99■□□□□ 0.79
HOXD3-202ENST00000410016 DCTN1Q14203 1278 aa19.98■□□□□ 0.79
HOXD3-202ENST00000410016 GCC1Q96CN9 775 aa19.98■□□□□ 0.79
HOXD3-202ENST00000410016 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
HOXD3-202ENST00000410016 TTC21BQ7Z4L5 1316 aa19.97■□□□□ 0.79
HOXD3-202ENST00000410016 DLG5Q8TDM6 1919 aa19.97■□□□□ 0.79
HOXD3-202ENST00000410016 EIF4A2Q14240 407 aaKnown RBP19.97■□□□□ 0.79
HOXD3-202ENST00000410016 AEBP1Q8IUX7 1158 aa19.97■□□□□ 0.79
HOXD3-202ENST00000410016 BMP2KLQ5H9B9 411 aa19.96■□□□□ 0.79
HOXD3-202ENST00000410016 PLEKHG3A1L390 1219 aa19.95■□□□□ 0.78
HOXD3-202ENST00000410016 RBM25P49756 843 aaKnown RBP19.95■□□□□ 0.78
HOXD3-202ENST00000410016 ANKRD45Q5TZF3 282 aa19.95■□□□□ 0.78
HOXD3-202ENST00000410016 ACEP12821 1306 aa19.95■□□□□ 0.78
HOXD3-202ENST00000410016 LTKP29376 864 aa19.94■□□□□ 0.78
HOXD3-202ENST00000410016 SULT6B1Q6IMI4 303 aa19.94■□□□□ 0.78
HOXD3-202ENST00000410016 API5Q9BZZ5 524 aaKnown RBP19.94■□□□□ 0.78
HOXD3-202ENST00000410016 UBR1Q8IWV7 1749 aa19.94■□□□□ 0.78
HOXD3-202ENST00000410016 OVOS2A0A0J9YW53 1432 aa19.93■□□□□ 0.78
HOXD3-202ENST00000410016 OVOS2Q6IE36 1432 aa19.93■□□□□ 0.78
HOXD3-202ENST00000410016 BRPF3Q9ULD4 1205 aa19.93■□□□□ 0.78
HOXD3-202ENST00000410016 ITSN1Q15811 1721 aa19.93■□□□□ 0.78
HOXD3-202ENST00000410016 NRKQ7Z2Y5 1582 aa19.93■□□□□ 0.78
HOXD3-202ENST00000410016 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.92■□□□□ 0.78
HOXD3-202ENST00000410016 KIF24Q5T7B8 1368 aa19.91■□□□□ 0.78
HOXD3-202ENST00000410016 CHL1O00533 1208 aa19.91■□□□□ 0.78
HOXD3-202ENST00000410016 PLEKHG1Q9ULL1 1385 aa19.91■□□□□ 0.78
HOXD3-202ENST00000410016 SPRYD3Q8NCJ5 442 aa19.91■□□□□ 0.78
HOXD3-202ENST00000410016 HSP90AB2PQ58FF8 381 aa19.9■□□□□ 0.78
HOXD3-202ENST00000410016 KIF13AQ9H1H9 1805 aa19.9■□□□□ 0.78
HOXD3-202ENST00000410016 USP6P35125 1406 aa19.9■□□□□ 0.78
HOXD3-202ENST00000410016 USP31Q70CQ4 1352 aa19.89■□□□□ 0.77
HOXD3-202ENST00000410016 NUTM2FA1L443 756 aa19.89■□□□□ 0.77
HOXD3-202ENST00000410016 SSH2Q76I76 1423 aa19.89■□□□□ 0.77
HOXD3-202ENST00000410016 KRT24Q2M2I5 525 aa19.88■□□□□ 0.77
HOXD3-202ENST00000410016 INTS3Q68E01 1043 aaKnown RBP19.88■□□□□ 0.77
HOXD3-202ENST00000410016 SNX21Q969T3 373 aa19.87■□□□□ 0.77
HOXD3-202ENST00000410016 TOPAZ1Q8N9V7 1692 aa19.87■□□□□ 0.77
HOXD3-202ENST00000410016 PTPRUQ92729 1446 aa19.87■□□□□ 0.77
HOXD3-202ENST00000410016 MCM10Q7L590 875 aa19.87■□□□□ 0.77
HOXD3-202ENST00000410016 KIF2CQ99661 725 aa19.87■□□□□ 0.77
HOXD3-202ENST00000410016 CHMP5Q9NZZ3 219 aa19.87■□□□□ 0.77
HOXD3-202ENST00000410016 RGS12O14924 1447 aa19.86■□□□□ 0.77
HOXD3-202ENST00000410016 KIAA0232Q92628 1395 aa19.86■□□□□ 0.77
HOXD3-202ENST00000410016 SLC26A8Q96RN1 970 aa19.85■□□□□ 0.77
HOXD3-202ENST00000410016 DCTPP1Q9H773 170 aa19.85■□□□□ 0.77
HOXD3-202ENST00000410016 PEAK1Q9H792 1746 aa19.85■□□□□ 0.77
HOXD3-202ENST00000410016 NCOA3Q9Y6Q9 1424 aa19.85■□□□□ 0.77
HOXD3-202ENST00000410016 DDIT3P35638 169 aa19.85■□□□□ 0.77
HOXD3-202ENST00000410016 TBC1D9Q6ZT07 1266 aa19.85■□□□□ 0.77
HOXD3-202ENST00000410016 HSCBQ8IWL3 235 aa19.85■□□□□ 0.77
HOXD3-202ENST00000410016 MCM4P33991 863 aa19.84■□□□□ 0.77
HOXD3-202ENST00000410016 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
HOXD3-202ENST00000410016 RGPD1P0DJD0 1748 aa19.84■□□□□ 0.77
HOXD3-202ENST00000410016 CRB1P82279 1406 aa19.83■□□□□ 0.77
HOXD3-202ENST00000410016 NALCNQ8IZF0 1738 aa19.83■□□□□ 0.76
HOXD3-202ENST00000410016 CEBPAP49715 358 aaPredicted RBP19.81■□□□□ 0.76
HOXD3-202ENST00000410016 PLEKHM2Q8IWE5 1019 aa19.81■□□□□ 0.76
HOXD3-202ENST00000410016 RTN4Q9NQC3 1192 aaKnown RBP19.81■□□□□ 0.76
HOXD3-202ENST00000410016 MAP3K19Q56UN5 1328 aa19.81■□□□□ 0.76
HOXD3-202ENST00000410016 GSPT1P15170 499 aaKnown RBP19.81■□□□□ 0.76
HOXD3-202ENST00000410016 ANKRD44Q8N8A2 993 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms