RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 SPATA31A3Q5VYP0 1347 aa6.74□□□□□ -1.33
R3HDM1-203ENST00000409606 DIEXFQ68CQ4 756 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-203ENST00000409606 RGS17Q9UGC6 210 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-203ENST00000409606 PPP2R1AP30153 589 aa6.73□□□□□ -1.33
R3HDM1-203ENST00000409606 NUTM2DQ5VT03 806 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-203ENST00000409606 DAXXQ9UER7 740 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-203ENST00000409606 RNF123Q5XPI4 1314 aa6.73□□□□□ -1.33
R3HDM1-203ENST00000409606 SLC12A5Q9H2X9 1139 aa6.73□□□□□ -1.33
R3HDM1-203ENST00000409606 CABP2Q9NPB3 220 aa6.72□□□□□ -1.33
R3HDM1-203ENST00000409606 BRINP3Q76B58 766 aa6.72□□□□□ -1.33
R3HDM1-203ENST00000409606 A0A1B0GUL6 1792 aa6.72□□□□□ -1.33
R3HDM1-203ENST00000409606 CCDC27Q2M243 656 aa6.72□□□□□ -1.33
R3HDM1-203ENST00000409606 NLRP13Q86W25 1043 aa6.71□□□□□ -1.34
R3HDM1-203ENST00000409606 ZRANB1Q9UGI0 708 aa6.71□□□□□ -1.34
R3HDM1-203ENST00000409606 IGSF1Q8N6C5 1336 aa6.71□□□□□ -1.34
R3HDM1-203ENST00000409606 CADPS2Q86UW7 1296 aa6.71□□□□□ -1.34
R3HDM1-203ENST00000409606 TERF2IPQ9NYB0 399 aa6.71□□□□□ -1.34
R3HDM1-203ENST00000409606 CABP1Q9NZU7 370 aa6.71□□□□□ -1.34
R3HDM1-203ENST00000409606 KCPQ6ZWJ8 1503 aa6.71□□□□□ -1.34
R3HDM1-203ENST00000409606 MIER1Q8N108 512 aa6.7□□□□□ -1.34
R3HDM1-203ENST00000409606 FLT4P35916 1363 aa6.7□□□□□ -1.34
R3HDM1-203ENST00000409606 MINK1Q8N4C8 1332 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-203ENST00000409606 SCN7AQ01118 1682 aa6.7□□□□□ -1.34
R3HDM1-203ENST00000409606 RXRBP28702 533 aa6.7□□□□□ -1.34
R3HDM1-203ENST00000409606 POTEAQ6S8J7 498 aa6.7□□□□□ -1.34
R3HDM1-203ENST00000409606 IL13P35225 146 aa6.7□□□□□ -1.34
R3HDM1-203ENST00000409606 CCDC184Q52MB2 194 aa6.7□□□□□ -1.34
R3HDM1-203ENST00000409606 NGLY1Q96IV0 654 aa6.7□□□□□ -1.34
R3HDM1-203ENST00000409606 STAG3Q9UJ98 1225 aa6.7□□□□□ -1.34
R3HDM1-203ENST00000409606 TNS2Q63HR2 1409 aa6.69□□□□□ -1.34
R3HDM1-203ENST00000409606 NGEFQ8N5V2 710 aa6.69□□□□□ -1.34
R3HDM1-203ENST00000409606 HEG1Q9ULI3 1381 aa6.69□□□□□ -1.34
R3HDM1-203ENST00000409606 CHGAP10645 457 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-203ENST00000409606 POLKQ9UBT6 870 aa6.69□□□□□ -1.34
R3HDM1-203ENST00000409606 CEMIPQ8WUJ3 1361 aa6.69□□□□□ -1.34
R3HDM1-203ENST00000409606 CRB1P82279 1406 aa6.69□□□□□ -1.34
R3HDM1-203ENST00000409606 ARFGEF2Q9Y6D5 1785 aa6.69□□□□□ -1.34
R3HDM1-203ENST00000409606 PHF8Q9UPP1 1060 aa6.69□□□□□ -1.34
R3HDM1-203ENST00000409606 NRXN2Q9P2S2 1712 aa6.69□□□□□ -1.34
R3HDM1-203ENST00000409606 ATRNO75882 1429 aa6.68□□□□□ -1.34
R3HDM1-203ENST00000409606 BCL9LQ86UU0 1499 aa6.68□□□□□ -1.34
R3HDM1-203ENST00000409606 BTAF1O14981 1849 aa6.68□□□□□ -1.34
R3HDM1-203ENST00000409606 C4AP0C0L4 1744 aa6.68□□□□□ -1.34
R3HDM1-203ENST00000409606 C4BP0C0L5 1744 aa6.68□□□□□ -1.34
R3HDM1-203ENST00000409606 DDX10Q13206 875 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-203ENST00000409606 ARHGEF25Q86VW2 580 aa6.67□□□□□ -1.34
R3HDM1-203ENST00000409606 HIRIP3Q9BW71 556 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-203ENST00000409606 ZBED9Q6R2W3 1325 aa6.67□□□□□ -1.34
R3HDM1-203ENST00000409606 NPHP3Q7Z494 1330 aa6.67□□□□□ -1.34
R3HDM1-203ENST00000409606 RBM6P78332 1123 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-203ENST00000409606 MEX3CQ5U5Q3 659 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-203ENST00000409606 POGKQ9P215 609 aa6.66□□□□□ -1.34
R3HDM1-203ENST00000409606 MEGF6O75095 1541 aa6.66□□□□□ -1.34
R3HDM1-203ENST00000409606 SLAIN2Q9P270 581 aa6.66□□□□□ -1.34
R3HDM1-203ENST00000409606 HDGFL2Q7Z4V5 671 aaPredicted RBP6.65□□□□□ -1.34
R3HDM1-203ENST00000409606 RSPH6AQ9H0K4 717 aa6.65□□□□□ -1.34
R3HDM1-203ENST00000409606 ZNF646O15015 1829 aaPredicted RBP6.65□□□□□ -1.34
R3HDM1-203ENST00000409606 DDX60Q8IY21 1712 aaKnown RBP6.65□□□□□ -1.34
R3HDM1-203ENST00000409606 KIF13BQ9NQT8 1826 aa6.65□□□□□ -1.34
R3HDM1-203ENST00000409606 STK26Q9P289 416 aa6.65□□□□□ -1.34
R3HDM1-203ENST00000409606 UBR3Q6ZT12 1888 aa6.65□□□□□ -1.35
R3HDM1-203ENST00000409606 DLEC1Q9Y238 1755 aa6.64□□□□□ -1.35
R3HDM1-203ENST00000409606 ORAI2Q96SN7 254 aa6.64□□□□□ -1.35
R3HDM1-203ENST00000409606 IL16Q14005 1332 aa6.64□□□□□ -1.35
R3HDM1-203ENST00000409606 KIAA1551Q9HCM1 1747 aa6.64□□□□□ -1.35
R3HDM1-203ENST00000409606 NME9Q86XW9 330 aa6.64□□□□□ -1.35
R3HDM1-203ENST00000409606 ZNF853P0CG23 659 aa6.63□□□□□ -1.35
R3HDM1-203ENST00000409606 PROSER2Q86WR7 435 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-203ENST00000409606 IP6K1Q92551 441 aa6.63□□□□□ -1.35
R3HDM1-203ENST00000409606 ARAP2Q8WZ64 1704 aa6.63□□□□□ -1.35
R3HDM1-203ENST00000409606 MAP3K19Q56UN5 1328 aa6.63□□□□□ -1.35
R3HDM1-203ENST00000409606 PXDNLA1KZ92 1463 aa6.63□□□□□ -1.35
R3HDM1-203ENST00000409606 BRPF1P55201 1214 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-203ENST00000409606 KNSTRNQ9Y448 316 aa6.63□□□□□ -1.35
R3HDM1-203ENST00000409606 KDM6AO15550 1401 aaPredicted RBP6.62□□□□□ -1.35
R3HDM1-203ENST00000409606 HOXC9P31274 260 aa6.62□□□□□ -1.35
R3HDM1-203ENST00000409606 KCNH5Q8NCM2 988 aa6.62□□□□□ -1.35
R3HDM1-203ENST00000409606 SRPK2P78362 688 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-203ENST00000409606 LRRC37AA6NMS7 1700 aa6.61□□□□□ -1.35
R3HDM1-203ENST00000409606 ERBB3P21860 1342 aa6.61□□□□□ -1.35
R3HDM1-203ENST00000409606 ANP32CO43423 234 aa6.61□□□□□ -1.35
R3HDM1-203ENST00000409606 ONECUT3O60422 494 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-203ENST00000409606 NKX1-1Q15270 411 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-203ENST00000409606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.61□□□□□ -1.351e-6■■■■□ 26.2
R3HDM1-203ENST00000409606 RGS12O14924 1447 aa6.61□□□□□ -1.35
R3HDM1-203ENST00000409606 DCAF8L1A6NGE4 600 aa6.61□□□□□ -1.35
R3HDM1-203ENST00000409606 BABAM1Q9NWV8 329 aa6.61□□□□□ -1.35
R3HDM1-203ENST00000409606 HTATSF1O43719 755 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-203ENST00000409606 FCHSD2O94868 740 aa6.6□□□□□ -1.35
R3HDM1-203ENST00000409606 PSME1Q06323 249 aa6.6□□□□□ -1.35
R3HDM1-203ENST00000409606 EIF4A2Q14240 407 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-203ENST00000409606 KRT28Q7Z3Y7 464 aa6.6□□□□□ -1.35
R3HDM1-203ENST00000409606 AFDNP55196 1824 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-203ENST00000409606 FNBP4Q8N3X1 1017 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-203ENST00000409606 TRIM35Q9UPQ4 493 aa6.6□□□□□ -1.35
R3HDM1-203ENST00000409606 KIAA0232Q92628 1395 aa6.59□□□□□ -1.35
R3HDM1-203ENST00000409606 LRRC59Q96AG4 307 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-203ENST00000409606 TRPC5Q9UL62 973 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-203ENST00000409606 LTBP1Q14766 1721 aa6.59□□□□□ -1.35
R3HDM1-203ENST00000409606 SOS1Q07889 1333 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms