RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 PKP1Q13835 747 aa7.1□□□□□ -1.27
R3HDM1-202ENST00000409478 NOB1Q9ULX3 412 aaKnown RBP7.1□□□□□ -1.27
R3HDM1-202ENST00000409478 NOS1P29475 1434 aa7.09□□□□□ -1.27
R3HDM1-202ENST00000409478 MORC1Q86VD1 984 aa7.09□□□□□ -1.27
R3HDM1-202ENST00000409478 SSH1Q8WYL5 1049 aa7.09□□□□□ -1.27
R3HDM1-202ENST00000409478 TSPYL1Q9H0U9 437 aa7.09□□□□□ -1.27
R3HDM1-202ENST00000409478 ADGRB2O60241 1585 aa7.09□□□□□ -1.27
R3HDM1-202ENST00000409478 MAST1Q9Y2H9 1570 aa7.09□□□□□ -1.27
R3HDM1-202ENST00000409478 ZNF518AQ6AHZ1 1483 aa7.09□□□□□ -1.27
R3HDM1-202ENST00000409478 PLEKHD1A6NEE1 506 aa7.09□□□□□ -1.27
R3HDM1-202ENST00000409478 TIGD1Q96MW7 591 aa7.09□□□□□ -1.27
R3HDM1-202ENST00000409478 ZNF830Q96NB3 372 aaPredicted RBP7.09□□□□□ -1.27
R3HDM1-202ENST00000409478 RIOK3O14730 519 aaKnown RBP7.09□□□□□ -1.28
R3HDM1-202ENST00000409478 IRX5P78411 483 aaPredicted RBP7.09□□□□□ -1.28
R3HDM1-202ENST00000409478 CARD14Q9BXL6 1004 aa7.09□□□□□ -1.28
R3HDM1-202ENST00000409478 ZDHHC9Q9Y397 364 aa7.09□□□□□ -1.28
R3HDM1-202ENST00000409478 SPHKAPQ2M3C7 1700 aa7.09□□□□□ -1.28
R3HDM1-202ENST00000409478 CASC1Q6TDU7 716 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 CREBRFQ8IUR6 639 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 IL16Q14005 1332 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 KIAA1210Q9ULL0 1709 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 MED14O60244 1454 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 ZBTB7CA1YPR0 619 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 VGLL3A8MV65 326 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 ADCY5O95622 1261 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 HNRNPMP52272 730 aaKnown RBP eCLIP7.08□□□□□ -1.283e-6■■■■□ 21.2
R3HDM1-202ENST00000409478 INTS3Q68E01 1043 aaKnown RBP7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 CALCOCO1Q9P1Z2 691 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 NSFL1CQ9UNZ2 370 aaKnown RBP7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 ERVK-7P63135 1459 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 PLB1Q6P1J6 1458 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 GOLGA6L6A8MZA4 724 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 EXOSC9Q06265 439 aaKnown RBP7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 ALDH1L2Q3SY69 923 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 USP26Q9BXU7 913 aa7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 TTC12Q9H892 705 aaPredicted RBP7.08□□□□□ -1.28
R3HDM1-202ENST00000409478 KCNJ4P48050 445 aa7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 KIAA1524Q8TCG1 905 aa7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 AK9Q5TCS8 1911 aa7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 FAM177BA6PVY3 158 aa7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 MCM2P49736 904 aa7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 ZGPATQ8N5A5 531 aaKnown RBP7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 USP25Q9UHP3 1055 aa7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 DDX41Q9UJV9 622 aaKnown RBP7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 PPIP5K1Q6PFW1 1433 aa7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 SLFN14P0C7P3 912 aa7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 CTNNA3Q9UI47 895 aa7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 MORC2Q9Y6X9 1032 aaPredicted RBP7.07□□□□□ -1.28
R3HDM1-202ENST00000409478 IGSF3O75054 1194 aa7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 BRD1O95696 1058 aa7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 ZNF428Q96B54 188 aa7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.06□□□□□ -1.282e-7■■□□□ 12.2
R3HDM1-202ENST00000409478 USP32Q8NFA0 1604 aa7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 BRPF1P55201 1214 aaPredicted RBP7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 NCBP1Q09161 790 aaKnown RBP7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 TERF2Q15554 542 aa7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 CCDC183Q5T5S1 534 aa7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 TSR2Q969E8 191 aaKnown RBP7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 KDM4AO75164 1064 aa7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 REC8O95072 547 aa7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 KRT222Q8N1A0 295 aa7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 NSD3Q9BZ95 1437 aa7.06□□□□□ -1.28
R3HDM1-202ENST00000409478 SAMD9LQ8IVG5 1584 aa7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 MYOM2P54296 1465 aa7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 SMTNL1A8MU46 457 aa7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 C17orf53Q8N3J3 647 aaPredicted RBP7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 SBNO2Q9Y2G9 1366 aa7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 PPRC1Q5VV67 1664 aaKnown RBP7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 ZBTB22O15209 634 aa7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 GSPT1P15170 499 aaKnown RBP7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 TRHP20396 242 aaPredicted RBP7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 PAXBP1Q9Y5B6 917 aa7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 ABCA8O94911 1581 aa7.05□□□□□ -1.28
R3HDM1-202ENST00000409478 TULP2O00295 520 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 ZBTB7BO15156 539 aaPredicted RBP7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 TTC22Q5TAA0 569 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 INTS4Q96HW7 963 aaKnown RBP7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 TRPM2O94759 1503 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 ATAD2Q6PL18 1390 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 U2AF1L5P0DN76 240 aaPredicted RBP7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 U2AF1Q01081 240 aaKnown RBP eCLIP7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 ARHGAP45Q92619 1136 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 PIK3R4Q99570 1358 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 MTHFSP49914 203 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 CYB5RLQ6IPT4 315 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 PLCD3Q8N3E9 789 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 PREX2Q70Z35 1606 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 MYO3AQ8NEV4 1616 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 MX1P20591 662 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 IRX3P78415 501 aaPredicted RBP7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 PLEKHM2Q8IWE5 1019 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 TMEM87AQ8NBN3 555 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 KIF18AQ8NI77 898 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 NSD2O96028 1365 aa7.04□□□□□ -1.28
R3HDM1-202ENST00000409478 TRAPPC8Q9Y2L5 1435 aa7.03□□□□□ -1.28
R3HDM1-202ENST00000409478 NEURL4Q96JN8 1562 aa7.03□□□□□ -1.28
R3HDM1-202ENST00000409478 MPNDQ8N594 471 aa7.03□□□□□ -1.28
R3HDM1-202ENST00000409478 PTPRTO14522 1441 aa7.03□□□□□ -1.28
R3HDM1-202ENST00000409478 CUL4AQ13619 759 aa7.03□□□□□ -1.28
R3HDM1-202ENST00000409478 TMX3Q96JJ7 454 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms