RNA–Protein interactions for RNA: ENST00000409127.1

CCDC115-202, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2 BASIC

Gene CCDC115, Length 1,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-202ENST00000409127 USP35Q9P2H5 1018 aa30.1■■■□□ 2.41
CCDC115-202ENST00000409127 THRAP3Q9Y2W1 955 aaKnown RBP30.1■■■□□ 2.41
CCDC115-202ENST00000409127 NFAT5O94916 1531 aa30.09■■■□□ 2.41
CCDC115-202ENST00000409127 TOM1L2Q6ZVM7 507 aa30.09■■■□□ 2.41
CCDC115-202ENST00000409127 AXIN2Q9Y2T1 843 aa30.09■■■□□ 2.41
CCDC115-202ENST00000409127 TCP11L2Q8N4U5 519 aa30.08■■■□□ 2.41
CCDC115-202ENST00000409127 GLI3P10071 1580 aa30.07■■■□□ 2.4
CCDC115-202ENST00000409127 COL5A2P05997 1499 aaPredicted RBP30.07■■■□□ 2.4
CCDC115-202ENST00000409127 ZEB1P37275 1124 aaPredicted RBP30.07■■■□□ 2.4
CCDC115-202ENST00000409127 KNSTRNQ9Y448 316 aa30.07■■■□□ 2.4
CCDC115-202ENST00000409127 NRAPQ86VF7 1730 aa30.07■■■□□ 2.4
CCDC115-202ENST00000409127 AMPHP49418 695 aa30.06■■■□□ 2.4
CCDC115-202ENST00000409127 USP54Q70EL1 1684 aa30.06■■■□□ 2.4
CCDC115-202ENST00000409127 WDR17Q8IZU2 1322 aa30.05■■■□□ 2.4
CCDC115-202ENST00000409127 BARGINQ6ZT62 677 aa30.05■■■□□ 2.4
CCDC115-202ENST00000409127 CRB1P82279 1406 aa30.05■■■□□ 2.4
CCDC115-202ENST00000409127 MYOM1P52179 1685 aa30.04■■■□□ 2.4
CCDC115-202ENST00000409127 LMO7Q8WWI1 1683 aa30.04■■■□□ 2.4
CCDC115-202ENST00000409127 IP6K1Q92551 441 aa30.04■■■□□ 2.4
CCDC115-202ENST00000409127 ABCC6O95255 1503 aa30.03■■■□□ 2.4
CCDC115-202ENST00000409127 KRT27Q7Z3Y8 459 aa30.02■■■□□ 2.4
CCDC115-202ENST00000409127 MAP3K19Q56UN5 1328 aa30■■■□□ 2.39
CCDC115-202ENST00000409127 CARD10Q9BWT7 1032 aa30■■■□□ 2.39
CCDC115-202ENST00000409127 CCDC7Q96M83 1385 aa30■■■□□ 2.39
CCDC115-202ENST00000409127 BLMP54132 1417 aaPredicted RBP29.98■■■□□ 2.39
CCDC115-202ENST00000409127 ANKRD24Q8TF21 1146 aa29.98■■■□□ 2.39
CCDC115-202ENST00000409127 CDCA7Q9BWT1 371 aaPredicted RBP29.98■■■□□ 2.39
CCDC115-202ENST00000409127 WASHC2AQ641Q2 1341 aa29.97■■■□□ 2.39
CCDC115-202ENST00000409127 RRS1Q15050 365 aaKnown RBP29.97■■■□□ 2.39
CCDC115-202ENST00000409127 UPF1Q92900 1129 aaKnown RBP eCLIP29.97■■■□□ 2.394e-11■■■■■ 29.7
CCDC115-202ENST00000409127 NLRP2Q9NX02 1062 aa29.97■■■□□ 2.39
CCDC115-202ENST00000409127 NSD2O96028 1365 aa29.97■■■□□ 2.39
CCDC115-202ENST00000409127 ERBB3P21860 1342 aa29.96■■■□□ 2.39
CCDC115-202ENST00000409127 FBLN1P23142 703 aa29.96■■■□□ 2.39
CCDC115-202ENST00000409127 HOXC9P31274 260 aa29.96■■■□□ 2.39
CCDC115-202ENST00000409127 PDE3BQ13370 1112 aa29.95■■■□□ 2.39
CCDC115-202ENST00000409127 RTL1A6NKG5 1358 aa29.94■■■□□ 2.38
CCDC115-202ENST00000409127 KIF24Q5T7B8 1368 aa29.93■■■□□ 2.38
CCDC115-202ENST00000409127 COL18A1P39060 1754 aa29.93■■■□□ 2.38
CCDC115-202ENST00000409127 CCDC125Q86Z20 511 aa29.93■■■□□ 2.38
CCDC115-202ENST00000409127 MORC1Q86VD1 984 aa29.92■■■□□ 2.38
CCDC115-202ENST00000409127 LTV1Q96GA3 475 aaPredicted RBP29.92■■■□□ 2.38
CCDC115-202ENST00000409127 PPM1GO15355 546 aaPredicted RBP29.89■■■□□ 2.38
CCDC115-202ENST00000409127 KIF20BQ96Q89 1820 aa29.89■■■□□ 2.38
CCDC115-202ENST00000409127 TNNT2P45379 298 aaPredicted RBP29.88■■■□□ 2.37
CCDC115-202ENST00000409127 FLT4P35916 1363 aa29.88■■■□□ 2.37
CCDC115-202ENST00000409127 SMG6Q86US8 1419 aaKnown RBP29.88■■■□□ 2.37
CCDC115-202ENST00000409127 DDB1Q16531 1140 aa29.87■■■□□ 2.37
CCDC115-202ENST00000409127 SF3B2Q13435 895 aaKnown RBP29.85■■■□□ 2.37
CCDC115-202ENST00000409127 PER1O15534 1290 aaPredicted RBP29.84■■■□□ 2.37
CCDC115-202ENST00000409127 AMER1Q5JTC6 1135 aaPredicted RBP29.84■■■□□ 2.37
CCDC115-202ENST00000409127 FAM196AQ6ZSG2 479 aa29.84■■■□□ 2.37
CCDC115-202ENST00000409127 EMILIN1Q9Y6C2 1016 aa29.84■■■□□ 2.37
CCDC115-202ENST00000409127 INSRP06213 1382 aa29.84■■■□□ 2.37
CCDC115-202ENST00000409127 LTN1O94822 1766 aa29.84■■■□□ 2.37
CCDC115-202ENST00000409127 EXOC5O00471 708 aa29.83■■■□□ 2.37
CCDC115-202ENST00000409127 HSP90AB2PQ58FF8 381 aa29.83■■■□□ 2.37
CCDC115-202ENST00000409127 POLKQ9UBT6 870 aa29.83■■■□□ 2.37
CCDC115-202ENST00000409127 IL2RBP14784 551 aa29.82■■■□□ 2.36
CCDC115-202ENST00000409127 THSD7AQ9UPZ6 1657 aa29.82■■■□□ 2.36
CCDC115-202ENST00000409127 CC2D1BQ5T0F9 858 aaKnown RBP29.77■■■□□ 2.36
CCDC115-202ENST00000409127 FAM182BQ5T319 152 aa29.76■■■□□ 2.35
CCDC115-202ENST00000409127 RGPD5Q99666 1765 aa29.75■■■□□ 2.35
CCDC115-202ENST00000409127 NPC1L1Q9UHC9 1359 aa29.75■■■□□ 2.35
CCDC115-202ENST00000409127 NBPF6Q5VWK0 638 aa29.74■■■□□ 2.35
CCDC115-202ENST00000409127 NBPF4Q96M43 638 aa29.74■■■□□ 2.35
CCDC115-202ENST00000409127 DISP2A7MBM2 1401 aa29.73■■■□□ 2.35
CCDC115-202ENST00000409127 RAPGEF4Q8WZA2 1011 aa29.72■■■□□ 2.35
CCDC115-202ENST00000409127 BRWD3Q6RI45 1802 aa29.72■■■□□ 2.35
CCDC115-202ENST00000409127 CNGB1Q14028 1251 aaPredicted RBP29.69■■■□□ 2.34
CCDC115-202ENST00000409127 OVOS2A0A0G2JMS6 1433 aa29.69■■■□□ 2.34
CCDC115-202ENST00000409127 PARP4Q9UKK3 1724 aaKnown RBP29.68■■■□□ 2.34
CCDC115-202ENST00000409127 ANKRD26Q9UPS8 1709 aa29.68■■■□□ 2.34
CCDC115-202ENST00000409127 BAG6P46379 1132 aa29.68■■■□□ 2.34
CCDC115-202ENST00000409127 FAM208AQ9UK61 1670 aaKnown RBP29.67■■■□□ 2.34
CCDC115-202ENST00000409127 TATP17735 454 aaPredicted RBP29.67■■■□□ 2.34
CCDC115-202ENST00000409127 MARCH10Q8NA82 808 aaPredicted RBP29.67■■■□□ 2.34
CCDC115-202ENST00000409127 TRIM37O94972 964 aa29.66■■■□□ 2.34
CCDC115-202ENST00000409127 USHBP1Q8N6Y0 703 aa29.66■■■□□ 2.34
CCDC115-202ENST00000409127 TNS2Q63HR2 1409 aa29.64■■■□□ 2.34
CCDC115-202ENST00000409127 EIF4A2Q14240 407 aaKnown RBP29.64■■■□□ 2.34
CCDC115-202ENST00000409127 ZCRB1Q8TBF4 217 aaKnown RBP29.64■■■□□ 2.34
CCDC115-202ENST00000409127 PEAK1Q9H792 1746 aa29.63■■■□□ 2.33
CCDC115-202ENST00000409127 MTHFSP49914 203 aa29.62■■■□□ 2.33
CCDC115-202ENST00000409127 DDX54Q8TDD1 881 aaKnown RBP29.62■■■□□ 2.33
CCDC115-202ENST00000409127 EYA1Q99502 592 aa29.62■■■□□ 2.33
CCDC115-202ENST00000409127 LRRC37A3O60309 1634 aa29.6■■■□□ 2.33
CCDC115-202ENST00000409127 APBA3O96018 575 aa29.59■■■□□ 2.33
CCDC115-202ENST00000409127 BCL9O00512 1426 aa29.59■■■□□ 2.33
CCDC115-202ENST00000409127 EP400Q96L91 3159 aa29.59■■■□□ 2.33
CCDC115-202ENST00000409127 MAP2P11137 1827 aaKnown RBP29.58■■■□□ 2.33
CCDC115-202ENST00000409127 DEFB132Q7Z7B7 95 aa29.58■■■□□ 2.33
CCDC115-202ENST00000409127 BCL11BQ9C0K0 894 aaPredicted RBP29.57■■■□□ 2.32
CCDC115-202ENST00000409127 DDX10Q13206 875 aaKnown RBP29.55■■■□□ 2.32
CCDC115-202ENST00000409127 SPG7Q9UQ90 795 aa29.55■■■□□ 2.32
CCDC115-202ENST00000409127 WNK3Q9BYP7 1800 aa29.53■■■□□ 2.32
CCDC115-202ENST00000409127 EN1Q05925 392 aaPredicted RBP29.53■■■□□ 2.32
CCDC115-202ENST00000409127 CFAP53Q96M91 514 aa29.53■■■□□ 2.32
CCDC115-202ENST00000409127 IGSF1Q8N6C5 1336 aa29.52■■■□□ 2.32
CCDC115-202ENST00000409127 MEGF6O75095 1541 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms