RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 HSPA1BP0DMV9 641 aaKnown RBP12.67□□□□□ -0.38
GPN1-202ENST00000407583 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
GPN1-202ENST00000407583 ZNF827Q17R98 1081 aa12.67□□□□□ -0.38
GPN1-202ENST00000407583 THRAP3Q9Y2W1 955 aaKnown RBP12.67□□□□□ -0.38
GPN1-202ENST00000407583 ABCC11Q96J66 1382 aa12.65□□□□□ -0.38
GPN1-202ENST00000407583 KNDC1Q76NI1 1749 aa12.65□□□□□ -0.39
GPN1-202ENST00000407583 PHRF1Q9P1Y6 1649 aaKnown RBP12.64□□□□□ -0.39
GPN1-202ENST00000407583 GPRASP1Q5JY77 1395 aa12.64□□□□□ -0.39
GPN1-202ENST00000407583 COL24A1Q17RW2 1714 aa12.64□□□□□ -0.39
GPN1-202ENST00000407583 DDB1Q16531 1140 aa12.63□□□□□ -0.39
GPN1-202ENST00000407583 TULP4Q9NRJ4 1543 aa12.62□□□□□ -0.39
GPN1-202ENST00000407583 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
GPN1-202ENST00000407583 TMEM132EQ6IEE7 984 aa12.62□□□□□ -0.39
GPN1-202ENST00000407583 MARCH10Q8NA82 808 aaPredicted RBP12.62□□□□□ -0.39
GPN1-202ENST00000407583 KIF1BO60333 1816 aa12.62□□□□□ -0.39
GPN1-202ENST00000407583 BCL9O00512 1426 aa12.62□□□□□ -0.39
GPN1-202ENST00000407583 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
GPN1-202ENST00000407583 ARHGEF28Q8N1W1 1705 aaKnown RBP12.61□□□□□ -0.39
GPN1-202ENST00000407583 SLC16A10Q8TF71 515 aa12.61□□□□□ -0.39
GPN1-202ENST00000407583 ANKARQ7Z5J8 1434 aa12.6□□□□□ -0.39
GPN1-202ENST00000407583 PPLO60437 1756 aa12.6□□□□□ -0.39
GPN1-202ENST00000407583 RPGRIP1LQ68CZ1 1315 aa12.59□□□□□ -0.39
GPN1-202ENST00000407583 COL5A2P05997 1499 aaPredicted RBP12.58□□□□□ -0.39
GPN1-202ENST00000407583 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
GPN1-202ENST00000407583 NUTM2GQ5VZR2 741 aa12.57□□□□□ -0.4
GPN1-202ENST00000407583 RBM46Q8TBY0 533 aaKnown RBP12.57□□□□□ -0.4
GPN1-202ENST00000407583 NMRK2Q9NPI5 230 aa12.57□□□□□ -0.4
GPN1-202ENST00000407583 ADGRF5Q8IZF2 1346 aa12.57□□□□□ -0.4
GPN1-202ENST00000407583 CRB1P82279 1406 aa12.57□□□□□ -0.4
GPN1-202ENST00000407583 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
GPN1-202ENST00000407583 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
GPN1-202ENST00000407583 FAM50AQ14320 339 aaKnown RBP12.56□□□□□ -0.4
GPN1-202ENST00000407583 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
GPN1-202ENST00000407583 LRRC4BQ9NT99 713 aa12.56□□□□□ -0.4
GPN1-202ENST00000407583 MIER1Q8N108 512 aa12.55□□□□□ -0.4
GPN1-202ENST00000407583 PRR36Q9H6K5 1346 aa12.55□□□□□ -0.4
GPN1-202ENST00000407583 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
GPN1-202ENST00000407583 CPDO75976 1380 aa12.54□□□□□ -0.4
GPN1-202ENST00000407583 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
GPN1-202ENST00000407583 FSTL1Q12841 308 aa12.52□□□□□ -0.41
GPN1-202ENST00000407583 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.41
GPN1-202ENST00000407583 SIRT1Q96EB6 747 aa12.52□□□□□ -0.41
GPN1-202ENST00000407583 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
GPN1-202ENST00000407583 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
GPN1-202ENST00000407583 TUBGCP6Q96RT7 1819 aa12.51□□□□□ -0.41
GPN1-202ENST00000407583 MAPK8IP2Q13387 824 aaPredicted RBP12.51□□□□□ -0.41
GPN1-202ENST00000407583 PRAM1Q96QH2 718 aa12.51□□□□□ -0.41
GPN1-202ENST00000407583 WNK3Q9BYP7 1800 aa12.5□□□□□ -0.41
GPN1-202ENST00000407583 MLLT1Q03111 559 aaPredicted RBP12.5□□□□□ -0.41
GPN1-202ENST00000407583 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
GPN1-202ENST00000407583 CD2APQ9Y5K6 639 aa12.5□□□□□ -0.41
GPN1-202ENST00000407583 KIAA1210Q9ULL0 1709 aa12.49□□□□□ -0.41
GPN1-202ENST00000407583 BRD4O60885 1362 aaPredicted RBP12.49□□□□□ -0.41
GPN1-202ENST00000407583 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
GPN1-202ENST00000407583 ANKRD30BQ9BXX2 1392 aa12.49□□□□□ -0.41
GPN1-202ENST00000407583 MSL1Q68DK7 614 aa12.49□□□□□ -0.41
GPN1-202ENST00000407583 C16orf71Q8IYS4 520 aaPredicted RBP12.49□□□□□ -0.41
GPN1-202ENST00000407583 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
GPN1-202ENST00000407583 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
GPN1-202ENST00000407583 HIRIP3Q9BW71 556 aaPredicted RBP12.48□□□□□ -0.41
GPN1-202ENST00000407583 USP19O94966 1318 aa12.47□□□□□ -0.41
GPN1-202ENST00000407583 IGSF1Q8N6C5 1336 aa12.47□□□□□ -0.41
GPN1-202ENST00000407583 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
GPN1-202ENST00000407583 PIK3C2GO75747 1445 aa12.47□□□□□ -0.41
GPN1-202ENST00000407583 FOXN1O15353 648 aa12.45□□□□□ -0.42
GPN1-202ENST00000407583 USP6P35125 1406 aa12.45□□□□□ -0.42
GPN1-202ENST00000407583 KCNQ4P56696 695 aa12.45□□□□□ -0.42
GPN1-202ENST00000407583 ABHD8Q96I13 439 aa12.45□□□□□ -0.42
GPN1-202ENST00000407583 YTHDC1Q96MU7 727 aaKnown RBP12.45□□□□□ -0.42
GPN1-202ENST00000407583 BTAF1O14981 1849 aa12.45□□□□□ -0.42
GPN1-202ENST00000407583 ZBTB7CA1YPR0 619 aa12.44□□□□□ -0.42
GPN1-202ENST00000407583 CDCA7Q9BWT1 371 aaPredicted RBP12.44□□□□□ -0.42
GPN1-202ENST00000407583 PRDM10Q9NQV6 1147 aa12.43□□□□□ -0.42
GPN1-202ENST00000407583 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
GPN1-202ENST00000407583 EIF3AQ14152 1382 aaKnown RBP12.42□□□□□ -0.42
GPN1-202ENST00000407583 EXOC5O00471 708 aa12.42□□□□□ -0.42
GPN1-202ENST00000407583 GCP02774 474 aa12.42□□□□□ -0.42
GPN1-202ENST00000407583 RGS19P49795 217 aa12.42□□□□□ -0.42
GPN1-202ENST00000407583 SLC27A3Q5K4L6 730 aa12.42□□□□□ -0.42
GPN1-202ENST00000407583 POGKQ9P215 609 aa12.42□□□□□ -0.42
GPN1-202ENST00000407583 TNRC18O15417 2968 aaPredicted RBP12.41□□□□□ -0.42
GPN1-202ENST00000407583 ABTB2Q8N961 1025 aa12.41□□□□□ -0.42
GPN1-202ENST00000407583 TRPM1Q7Z4N2 1603 aa12.4□□□□□ -0.42
GPN1-202ENST00000407583 WDR17Q8IZU2 1322 aa12.4□□□□□ -0.42
GPN1-202ENST00000407583 MINK1Q8N4C8 1332 aaPredicted RBP12.4□□□□□ -0.42
GPN1-202ENST00000407583 SMC1BQ8NDV3 1235 aa12.4□□□□□ -0.42
GPN1-202ENST00000407583 RNF39Q9H2S5 420 aa12.4□□□□□ -0.42
GPN1-202ENST00000407583 KCPQ6ZWJ8 1503 aa12.4□□□□□ -0.42
GPN1-202ENST00000407583 WASLO00401 505 aaPredicted RBP12.39□□□□□ -0.43
GPN1-202ENST00000407583 RGL3Q3MIN7 710 aa12.39□□□□□ -0.43
GPN1-202ENST00000407583 C10orf71Q711Q0 1435 aa12.39□□□□□ -0.43
GPN1-202ENST00000407583 ITGAEP38570 1179 aa12.38□□□□□ -0.43
GPN1-202ENST00000407583 ABCC6O95255 1503 aa12.37□□□□□ -0.43
GPN1-202ENST00000407583 C14orf93Q9H972 538 aaKnown RBP12.37□□□□□ -0.43
GPN1-202ENST00000407583 RRAGCQ9HB90 399 aa12.37□□□□□ -0.43
GPN1-202ENST00000407583 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
GPN1-202ENST00000407583 CCDC85CA6NKD9 419 aa12.36□□□□□ -0.43
GPN1-202ENST00000407583 CFAP70Q5T0N1 1121 aa12.36□□□□□ -0.43
GPN1-202ENST00000407583 CARD10Q9BWT7 1032 aa12.36□□□□□ -0.43
GPN1-202ENST00000407583 SUPT16HQ9Y5B9 1047 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 292.1 ms