RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 PDILTQ8N807 584 aa15.36■□□□□ 0.05
ERBB2-202ENST00000406381 ZSCAN31Q96LW9 406 aaPredicted RBP15.36■□□□□ 0.05
ERBB2-202ENST00000406381 CDK13Q14004 1512 aaKnown RBP15.36■□□□□ 0.05
ERBB2-202ENST00000406381 ERCC4Q92889 916 aaPredicted RBP15.36■□□□□ 0.05
ERBB2-202ENST00000406381 NSD3Q9BZ95 1437 aa15.36■□□□□ 0.05
ERBB2-202ENST00000406381 CCDC30Q5VVM6 783 aa15.35■□□□□ 0.05
ERBB2-202ENST00000406381 ADCY5O95622 1261 aa15.35■□□□□ 0.05
ERBB2-202ENST00000406381 ABCC11Q96J66 1382 aa15.35■□□□□ 0.05
ERBB2-202ENST00000406381 KIF2AO00139 706 aaPredicted RBP15.35■□□□□ 0.05
ERBB2-202ENST00000406381 ANKRD1Q15327 319 aa15.35■□□□□ 0.05
ERBB2-202ENST00000406381 PTPN14Q15678 1187 aa15.35■□□□□ 0.05
ERBB2-202ENST00000406381 SPATA32Q96LK8 384 aa15.35■□□□□ 0.05
ERBB2-202ENST00000406381 HIP1O00291 1037 aa15.34■□□□□ 0.05
ERBB2-202ENST00000406381 FSD1Q9BTV5 496 aa15.34■□□□□ 0.05
ERBB2-202ENST00000406381 ZNF330Q9Y3S2 320 aaPredicted RBP15.34■□□□□ 0.05
ERBB2-202ENST00000406381 DISP3Q9P2K9 1392 aa15.34■□□□□ 0.05
ERBB2-202ENST00000406381 ZNF396Q96N95 335 aaPredicted RBP15.34■□□□□ 0.05
ERBB2-202ENST00000406381 CEBPZQ03701 1054 aaKnown RBP15.34■□□□□ 0.05
ERBB2-202ENST00000406381 UBXN4Q92575 508 aa15.34■□□□□ 0.05
ERBB2-202ENST00000406381 CALCOCO1Q9P1Z2 691 aa15.34■□□□□ 0.05
ERBB2-202ENST00000406381 DDX58O95786 925 aaKnown RBP15.33■□□□□ 0.05
ERBB2-202ENST00000406381 NUCB1Q02818 461 aa15.33■□□□□ 0.04
ERBB2-202ENST00000406381 NOLC1Q14978 699 aaKnown RBP eCLIP15.33■□□□□ 0.049e-7■■□□□ 13.7
ERBB2-202ENST00000406381 AFAP1Q8N556 730 aa15.33■□□□□ 0.04
ERBB2-202ENST00000406381 PLEKHH1Q9ULM0 1364 aa15.33■□□□□ 0.04
ERBB2-202ENST00000406381 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
ERBB2-202ENST00000406381 TNNT1P13805 278 aa15.33■□□□□ 0.04
ERBB2-202ENST00000406381 AKAP17AQ02040 695 aaKnown RBP15.33■□□□□ 0.04
ERBB2-202ENST00000406381 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
ERBB2-202ENST00000406381 TRDNQ13061 729 aa15.33■□□□□ 0.04
ERBB2-202ENST00000406381 KIF18AQ8NI77 898 aa15.33■□□□□ 0.04
ERBB2-202ENST00000406381 PRIM1P49642 420 aaKnown RBP15.32■□□□□ 0.04
ERBB2-202ENST00000406381 CEP57L1Q8IYX8 460 aa15.32■□□□□ 0.04
ERBB2-202ENST00000406381 RUFY1Q96T51 708 aa15.32■□□□□ 0.04
ERBB2-202ENST00000406381 GDPD2Q9HCC8 539 aa15.32■□□□□ 0.04
ERBB2-202ENST00000406381 NFE2L2Q16236 605 aa15.31■□□□□ 0.04
ERBB2-202ENST00000406381 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
ERBB2-202ENST00000406381 C16orf45Q96MC5 204 aaPredicted RBP15.31■□□□□ 0.04
ERBB2-202ENST00000406381 TSPYL1Q9H0U9 437 aa15.31■□□□□ 0.04
ERBB2-202ENST00000406381 RALGAPBQ86X10 1494 aa15.31■□□□□ 0.04
ERBB2-202ENST00000406381 CFAP45Q9UL16 551 aa15.31■□□□□ 0.04
ERBB2-202ENST00000406381 TMCO3Q6UWJ1 677 aa15.3■□□□□ 0.04
ERBB2-202ENST00000406381 CCDC94Q9BW85 323 aaPredicted RBP15.3■□□□□ 0.04
ERBB2-202ENST00000406381 STK38Q15208 465 aa15.3■□□□□ 0.04
ERBB2-202ENST00000406381 C1orf141Q5JVX7 400 aa15.3■□□□□ 0.04
ERBB2-202ENST00000406381 JAKMIP1Q96N16 626 aaKnown RBP15.3■□□□□ 0.04
ERBB2-202ENST00000406381 H0YHG0 523 aa15.3■□□□□ 0.04
ERBB2-202ENST00000406381 ME1P48163 572 aa15.3■□□□□ 0.04
ERBB2-202ENST00000406381 CSB-PGBD3P0DP91 1061 aa15.29■□□□□ 0.04
ERBB2-202ENST00000406381 BLOC1S2Q6QNY1 142 aa15.29■□□□□ 0.04
ERBB2-202ENST00000406381 EXOC6BQ9Y2D4 811 aa15.29■□□□□ 0.04
ERBB2-202ENST00000406381 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
ERBB2-202ENST00000406381 ARHGAP5Q13017 1502 aa15.29■□□□□ 0.04
ERBB2-202ENST00000406381 TOPBP1Q92547 1522 aa15.29■□□□□ 0.04
ERBB2-202ENST00000406381 SERPINC1P01008 464 aa15.29■□□□□ 0.04
ERBB2-202ENST00000406381 TERF1P54274 439 aa15.29■□□□□ 0.04
ERBB2-202ENST00000406381 CAMK4Q16566 473 aa15.29■□□□□ 0.04
ERBB2-202ENST00000406381 SMARCA5O60264 1052 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-202ENST00000406381 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-202ENST00000406381 SMAP1Q8IYB5 467 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-202ENST00000406381 GTPBP4Q9BZE4 634 aaKnown RBP15.29■□□□□ 0.04
ERBB2-202ENST00000406381 SCAND2PQ9GZW5 306 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-202ENST00000406381 HCLS1P14317 486 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-202ENST00000406381 GAS2L2Q8NHY3 880 aa15.29■□□□□ 0.04
ERBB2-202ENST00000406381 NOL7Q9UMY1 257 aaKnown RBP15.29■□□□□ 0.04
ERBB2-202ENST00000406381 SAFBQ15424 915 aaKnown RBP eCLIP15.28■□□□□ 0.04
ERBB2-202ENST00000406381 RALYLQ86SE5 291 aaKnown RBP15.28■□□□□ 0.04
ERBB2-202ENST00000406381 FERMT3Q86UX7 667 aa15.28■□□□□ 0.04
ERBB2-202ENST00000406381 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
ERBB2-202ENST00000406381 PER1O15534 1290 aaPredicted RBP15.28■□□□□ 0.04
ERBB2-202ENST00000406381 MX1P20591 662 aa15.28■□□□□ 0.04
ERBB2-202ENST00000406381 STK3Q13188 491 aa15.28■□□□□ 0.04
ERBB2-202ENST00000406381 CAMSAP2Q08AD1 1489 aa15.28■□□□□ 0.04
ERBB2-202ENST00000406381 EIF3JO75822 258 aaKnown RBP15.27■□□□□ 0.04
ERBB2-202ENST00000406381 ERC1Q8IUD2 1116 aa15.27■□□□□ 0.04
ERBB2-202ENST00000406381 ERLIN1O75477 346 aa15.27■□□□□ 0.04
ERBB2-202ENST00000406381 RLBP1P12271 317 aa15.27■□□□□ 0.04
ERBB2-202ENST00000406381 CWC27Q6UX04 472 aaKnown RBP15.27■□□□□ 0.04
ERBB2-202ENST00000406381 ZNF830Q96NB3 372 aaPredicted RBP15.27■□□□□ 0.04
ERBB2-202ENST00000406381 THUMPD2Q9BTF0 503 aaKnown RBP15.27■□□□□ 0.04
ERBB2-202ENST00000406381 IL1RAPL2Q9NP60 686 aa15.27■□□□□ 0.04
ERBB2-202ENST00000406381 MAP4K4O95819 1239 aaPredicted RBP15.27■□□□□ 0.03
ERBB2-202ENST00000406381 PCMTD1Q96MG8 357 aaPredicted RBP15.27■□□□□ 0.03
ERBB2-202ENST00000406381 SULT6B1Q6IMI4 303 aa15.27■□□□□ 0.03
ERBB2-202ENST00000406381 NEMFO60524 1076 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 CASTP20810 708 aaKnown RBP15.26■□□□□ 0.03
ERBB2-202ENST00000406381 UBE2HP62256 183 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 CCDC83Q8IWF9 413 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 FAM177A1Q8N128 213 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-202ENST00000406381 CLIP2Q9UDT6 1046 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 ABCA10Q8WWZ4 1543 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 APPP05067 770 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 NESP48681 1621 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 SFPQP23246 707 aaKnown RBP eCLIP15.26■□□□□ 0.03
ERBB2-202ENST00000406381 TTC22Q5TAA0 569 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 CABP1Q9NZU7 370 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 LIMCH1Q9UPQ0 1083 aa15.26■□□□□ 0.03
ERBB2-202ENST00000406381 PAXBP1Q9Y5B6 917 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms