RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 MTHFSP49914 203 aa29.55■■■□□ 2.32
EPCAM-202ENST00000405271 RGPD5Q99666 1765 aa29.54■■■□□ 2.32
EPCAM-202ENST00000405271 KIF24Q5T7B8 1368 aa29.54■■■□□ 2.32
EPCAM-202ENST00000405271 CFAP53Q96M91 514 aa29.53■■■□□ 2.32
EPCAM-202ENST00000405271 POLKQ9UBT6 870 aa29.53■■■□□ 2.32
EPCAM-202ENST00000405271 ABCC6O95255 1503 aa29.53■■■□□ 2.32
EPCAM-202ENST00000405271 INSRP06213 1382 aa29.51■■■□□ 2.32
EPCAM-202ENST00000405271 FAM83GA6ND36 823 aa29.51■■■□□ 2.32
EPCAM-202ENST00000405271 RTL1A6NKG5 1358 aa29.51■■■□□ 2.31
EPCAM-202ENST00000405271 UNC5CLQ8IV45 518 aa29.5■■■□□ 2.31
EPCAM-202ENST00000405271 SLIT2O94813 1529 aa29.5■■■□□ 2.31
EPCAM-202ENST00000405271 COL18A1P39060 1754 aa29.49■■■□□ 2.31
EPCAM-202ENST00000405271 ATRNO75882 1429 aa29.49■■■□□ 2.31
EPCAM-202ENST00000405271 SOX12O15370 315 aa29.49■■■□□ 2.31
EPCAM-202ENST00000405271 RRS1Q15050 365 aaKnown RBP29.49■■■□□ 2.31
EPCAM-202ENST00000405271 EMILIN1Q9Y6C2 1016 aa29.49■■■□□ 2.31
EPCAM-202ENST00000405271 GCP02774 474 aa29.48■■■□□ 2.31
EPCAM-202ENST00000405271 FBLN1P23142 703 aa29.48■■■□□ 2.31
EPCAM-202ENST00000405271 FLT4P35916 1363 aa29.48■■■□□ 2.31
EPCAM-202ENST00000405271 MAP3K19Q56UN5 1328 aa29.47■■■□□ 2.31
EPCAM-202ENST00000405271 FAM208AQ9UK61 1670 aaKnown RBP29.46■■■□□ 2.31
EPCAM-202ENST00000405271 RGPD1P0DJD0 1748 aa29.46■■■□□ 2.31
EPCAM-202ENST00000405271 GJD4Q96KN9 370 aaPredicted RBP29.44■■■□□ 2.3
EPCAM-202ENST00000405271 PPM1GO15355 546 aaPredicted RBP29.43■■■□□ 2.3
EPCAM-202ENST00000405271 PNISRQ8TF01 805 aaKnown RBP29.43■■■□□ 2.3
EPCAM-202ENST00000405271 LMO7Q8WWI1 1683 aa29.41■■■□□ 2.3
EPCAM-202ENST00000405271 CPDO75976 1380 aa29.41■■■□□ 2.3
EPCAM-202ENST00000405271 RGS12O14924 1447 aa29.41■■■□□ 2.3
EPCAM-202ENST00000405271 AMPHP49418 695 aa29.4■■■□□ 2.3
EPCAM-202ENST00000405271 RGPD2P0DJD1 1756 aa29.4■■■□□ 2.3
EPCAM-202ENST00000405271 ARHGEF25Q86VW2 580 aa29.4■■■□□ 2.3
EPCAM-202ENST00000405271 COL14A1Q05707 1796 aaKnown RBP29.39■■■□□ 2.3
EPCAM-202ENST00000405271 PRDM11Q9NQV5 511 aa29.39■■■□□ 2.3
EPCAM-202ENST00000405271 BTG4Q9NY30 223 aa29.39■■■□□ 2.3
EPCAM-202ENST00000405271 BLMP54132 1417 aaPredicted RBP29.38■■■□□ 2.29
EPCAM-202ENST00000405271 ZC3H6P61129 1189 aaKnown RBP29.38■■■□□ 2.29
EPCAM-202ENST00000405271 WDR43Q15061 677 aaKnown RBP eCLIP29.38■■■□□ 2.29
EPCAM-202ENST00000405271 DIAPH1O60610 1272 aaKnown RBP29.37■■■□□ 2.29
EPCAM-202ENST00000405271 VPS72Q15906 364 aa29.37■■■□□ 2.29
EPCAM-202ENST00000405271 KIAA0232Q92628 1395 aa29.37■■■□□ 2.29
EPCAM-202ENST00000405271 CAMTA1Q9Y6Y1 1673 aa29.36■■■□□ 2.29
EPCAM-202ENST00000405271 HOXC9P31274 260 aa29.36■■■□□ 2.29
EPCAM-202ENST00000405271 FAM9BQ8IZU0 186 aa29.36■■■□□ 2.29
EPCAM-202ENST00000405271 NUDCQ9Y266 331 aa29.35■■■□□ 2.29
EPCAM-202ENST00000405271 PLCH1Q4KWH8 1693 aa29.35■■■□□ 2.29
EPCAM-202ENST00000405271 CHRNA2Q15822 529 aa29.34■■■□□ 2.29
EPCAM-202ENST00000405271 IP6K1Q92551 441 aa29.34■■■□□ 2.29
EPCAM-202ENST00000405271 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.33■■■□□ 2.29
EPCAM-202ENST00000405271 CCDC9Q9Y3X0 531 aaKnown RBP29.32■■■□□ 2.28
EPCAM-202ENST00000405271 HSP90AB2PQ58FF8 381 aa29.31■■■□□ 2.28
EPCAM-202ENST00000405271 NWD2Q9ULI1 1742 aa29.3■■■□□ 2.28
EPCAM-202ENST00000405271 IL13P35225 146 aa29.3■■■□□ 2.28
EPCAM-202ENST00000405271 ZBTB7CA1YPR0 619 aa29.29■■■□□ 2.28
EPCAM-202ENST00000405271 UPF1Q92900 1129 aaKnown RBP eCLIP29.29■■■□□ 2.28
EPCAM-202ENST00000405271 EIF4A2Q14240 407 aaKnown RBP29.28■■■□□ 2.28
EPCAM-202ENST00000405271 GLI3P10071 1580 aa29.27■■■□□ 2.28
EPCAM-202ENST00000405271 ONECUT3O60422 494 aaPredicted RBP29.26■■■□□ 2.27
EPCAM-202ENST00000405271 NRAPQ86VF7 1730 aa29.25■■■□□ 2.27
EPCAM-202ENST00000405271 ADAMTS8Q9UP79 889 aa29.25■■■□□ 2.27
EPCAM-202ENST00000405271 U2SURPO15042 1029 aaKnown RBP29.25■■■□□ 2.27
EPCAM-202ENST00000405271 U2AF1L5P0DN76 240 aaPredicted RBP29.23■■■□□ 2.27
EPCAM-202ENST00000405271 U2AF1Q01081 240 aaKnown RBP eCLIP29.23■■■□□ 2.27
EPCAM-202ENST00000405271 SEPT12Q8IYM1 358 aa29.22■■■□□ 2.27
EPCAM-202ENST00000405271 STRN4Q9NRL3 753 aa29.21■■■□□ 2.27
EPCAM-202ENST00000405271 SPATA31A5Q5VU36 1347 aa29.21■■■□□ 2.27
EPCAM-202ENST00000405271 SPATA31A7Q8IWB4 1347 aa29.21■■■□□ 2.27
EPCAM-202ENST00000405271 DLG5Q8TDM6 1919 aa29.21■■■□□ 2.27
EPCAM-202ENST00000405271 EP400Q96L91 3159 aa29.21■■■□□ 2.27
EPCAM-202ENST00000405271 COL5A2P05997 1499 aaPredicted RBP29.2■■■□□ 2.26
EPCAM-202ENST00000405271 ERBB3P21860 1342 aa29.2■■■□□ 2.26
EPCAM-202ENST00000405271 IGSF1Q8N6C5 1336 aa29.2■■■□□ 2.26
EPCAM-202ENST00000405271 EVA1CP58658 441 aa29.2■■■□□ 2.26
EPCAM-202ENST00000405271 NCAPD2Q15021 1401 aa29.19■■■□□ 2.26
EPCAM-202ENST00000405271 FAM98CQ17RN3 349 aaKnown RBP29.19■■■□□ 2.26
EPCAM-202ENST00000405271 AXIN2Q9Y2T1 843 aa29.19■■■□□ 2.26
EPCAM-202ENST00000405271 WNK3Q9BYP7 1800 aa29.18■■■□□ 2.26
EPCAM-202ENST00000405271 ANKRD24Q8TF21 1146 aa29.17■■■□□ 2.26
EPCAM-202ENST00000405271 PNNQ9H307 717 aaKnown RBP29.17■■■□□ 2.26
EPCAM-202ENST00000405271 KDRP35968 1356 aa29.17■■■□□ 2.26
EPCAM-202ENST00000405271 LTV1Q96GA3 475 aaPredicted RBP29.16■■■□□ 2.26
EPCAM-202ENST00000405271 FCHSD2O94868 740 aa29.15■■■□□ 2.26
EPCAM-202ENST00000405271 PARP4Q9UKK3 1724 aaKnown RBP29.15■■■□□ 2.26
EPCAM-202ENST00000405271 SPATA31A1Q5TZJ5 1347 aa29.15■■■□□ 2.26
EPCAM-202ENST00000405271 YTHDC1Q96MU7 727 aaKnown RBP29.15■■■□□ 2.26
EPCAM-202ENST00000405271 LARP1Q6PKG0 1096 aaKnown RBP29.14■■■□□ 2.25
EPCAM-202ENST00000405271 EYA1Q99502 592 aa29.14■■■□□ 2.25
EPCAM-202ENST00000405271 RUNDC1Q96C34 613 aa29.13■■■□□ 2.25
EPCAM-202ENST00000405271 RSPH6AQ9H0K4 717 aa29.13■■■□□ 2.25
EPCAM-202ENST00000405271 A0A0G2JS52 829 aa29.12■■■□□ 2.25
EPCAM-202ENST00000405271 MYT1Q01538 1121 aa29.12■■■□□ 2.25
EPCAM-202ENST00000405271 VIRMAQ69YN4 1812 aaKnown RBP29.12■■■□□ 2.25
EPCAM-202ENST00000405271 USP35Q9P2H5 1018 aa29.11■■■□□ 2.25
EPCAM-202ENST00000405271 HMOX1P09601 288 aa29.1■■■□□ 2.25
EPCAM-202ENST00000405271 HNRNPUQ00839 825 aaKnown RBP eCLIP29.1■■■□□ 2.25
EPCAM-202ENST00000405271 SULT6B1Q6IMI4 303 aa29.1■■■□□ 2.25
EPCAM-202ENST00000405271 CCDC146Q8IYE0 955 aa29.1■■■□□ 2.25
EPCAM-202ENST00000405271 WDR17Q8IZU2 1322 aa29.09■■■□□ 2.25
EPCAM-202ENST00000405271 KRT27Q7Z3Y8 459 aa29.09■■■□□ 2.25
EPCAM-202ENST00000405271 PLEKHF1Q96S99 279 aa29.09■■■□□ 2.25
EPCAM-202ENST00000405271 MAPK8IP3Q9UPT6 1336 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms