RNA–Protein interactions for RNA: ENST00000404816.6

LTBP1-203, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LTBP1, Length 6,333 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-203ENST00000404816 DDX58O95786 925 aaKnown RBP21.51■■□□□ 1.03
LTBP1-203ENST00000404816 TAF3Q5VWG9 929 aa21.51■■□□□ 1.03
LTBP1-203ENST00000404816 TICAM2Q86XR7 235 aa21.51■■□□□ 1.03
LTBP1-203ENST00000404816 IPO4Q8TEX9 1081 aaKnown RBP21.51■■□□□ 1.03
LTBP1-203ENST00000404816 ERLIN1O75477 346 aa21.51■■□□□ 1.03
LTBP1-203ENST00000404816 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
LTBP1-203ENST00000404816 HSP90AB4PQ58FF6 505 aa21.51■■□□□ 1.03
LTBP1-203ENST00000404816 CASKIN1Q8WXD9 1431 aa21.51■■□□□ 1.03
LTBP1-203ENST00000404816 GTF2F1P35269 517 aaKnown RBP eCLIP21.51■■□□□ 1.03
LTBP1-203ENST00000404816 LARP1BQ659C4 914 aaKnown RBP21.51■■□□□ 1.03
LTBP1-203ENST00000404816 BRMS1Q9HCU9 246 aa21.51■■□□□ 1.03
LTBP1-203ENST00000404816 GIMAP7Q8NHV1 300 aa21.5■■□□□ 1.03
LTBP1-203ENST00000404816 PDCL3Q9H2J4 239 aa21.5■■□□□ 1.03
LTBP1-203ENST00000404816 SYNJ1O43426 1573 aa21.5■■□□□ 1.03
LTBP1-203ENST00000404816 MCM2P49736 904 aa21.5■■□□□ 1.03
LTBP1-203ENST00000404816 CCDC97Q96F63 343 aaPredicted RBP21.5■■□□□ 1.03
LTBP1-203ENST00000404816 SPATA32Q96LK8 384 aa21.5■■□□□ 1.03
LTBP1-203ENST00000404816 NUP62CLQ9H1M0 184 aa21.5■■□□□ 1.03
LTBP1-203ENST00000404816 IKQ13123 557 aaPredicted RBP21.49■■□□□ 1.03
LTBP1-203ENST00000404816 MYO6Q9UM54 1294 aa21.48■■□□□ 1.03
LTBP1-203ENST00000404816 FYCO1Q9BQS8 1478 aa21.48■■□□□ 1.03
LTBP1-203ENST00000404816 CHD1LQ86WJ1 897 aa21.48■■□□□ 1.03
LTBP1-203ENST00000404816 CYP46A1Q9Y6A2 500 aa21.48■■□□□ 1.03
LTBP1-203ENST00000404816 SMG6Q86US8 1419 aaKnown RBP21.48■■□□□ 1.03
LTBP1-203ENST00000404816 UBXN4Q92575 508 aa21.48■■□□□ 1.03
LTBP1-203ENST00000404816 KRT85P78386 507 aa21.48■■□□□ 1.03
LTBP1-203ENST00000404816 TMCO3Q6UWJ1 677 aa21.48■■□□□ 1.03
LTBP1-203ENST00000404816 TRMT1Q9NXH9 659 aaKnown RBP21.48■■□□□ 1.03
LTBP1-203ENST00000404816 TNNT1P13805 278 aa21.47■■□□□ 1.03
LTBP1-203ENST00000404816 PPM1FP49593 454 aaPredicted RBP21.47■■□□□ 1.03
LTBP1-203ENST00000404816 AAMPQ13685 434 aa21.47■■□□□ 1.03
LTBP1-203ENST00000404816 GCC1Q96CN9 775 aa21.47■■□□□ 1.03
LTBP1-203ENST00000404816 PDCP20941 246 aa21.47■■□□□ 1.03
LTBP1-203ENST00000404816 SSFA2P28290 1259 aa21.47■■□□□ 1.03
LTBP1-203ENST00000404816 C20orf194Q5TEA3 1177 aa21.46■■□□□ 1.03
LTBP1-203ENST00000404816 C16orf45Q96MC5 204 aaPredicted RBP21.46■■□□□ 1.03
LTBP1-203ENST00000404816 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
LTBP1-203ENST00000404816 CLASRPQ8N2M8 674 aaKnown RBP21.46■■□□□ 1.03
LTBP1-203ENST00000404816 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.03
LTBP1-203ENST00000404816 SIL1Q9H173 461 aa21.45■■□□□ 1.03
LTBP1-203ENST00000404816 ZNHIT6Q9NWK9 470 aaKnown RBP21.45■■□□□ 1.02
LTBP1-203ENST00000404816 ANKRD50Q9ULJ7 1429 aa21.45■■□□□ 1.02
LTBP1-203ENST00000404816 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
LTBP1-203ENST00000404816 USP25Q9UHP3 1055 aa21.44■■□□□ 1.02
LTBP1-203ENST00000404816 UPF3BQ9BZI7 483 aaKnown RBP21.44■■□□□ 1.02
LTBP1-203ENST00000404816 TANGO6Q9C0B7 1094 aa21.44■■□□□ 1.02
LTBP1-203ENST00000404816 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
LTBP1-203ENST00000404816 PTPN14Q15678 1187 aa21.44■■□□□ 1.02
LTBP1-203ENST00000404816 TWISTNBQ3B726 338 aaPredicted RBP21.44■■□□□ 1.02
LTBP1-203ENST00000404816 ZBTB9Q96C00 473 aa21.44■■□□□ 1.02
LTBP1-203ENST00000404816 XBP1P17861 261 aa21.44■■□□□ 1.02
LTBP1-203ENST00000404816 FERMT3Q86UX7 667 aa21.44■■□□□ 1.02
LTBP1-203ENST00000404816 RBM27Q9P2N5 1060 aaKnown RBP21.43■■□□□ 1.02
LTBP1-203ENST00000404816 SF3B2Q13435 895 aaKnown RBP21.42■■□□□ 1.02
LTBP1-203ENST00000404816 CWC27Q6UX04 472 aaKnown RBP21.42■■□□□ 1.02
LTBP1-203ENST00000404816 DDX11Q96FC9 970 aa21.42■■□□□ 1.02
LTBP1-203ENST00000404816 JAKMIP1Q96N16 626 aaKnown RBP21.42■■□□□ 1.02
LTBP1-203ENST00000404816 USP8P40818 1118 aa21.42■■□□□ 1.02
LTBP1-203ENST00000404816 MVPQ14764 893 aaKnown RBP21.42■■□□□ 1.02
LTBP1-203ENST00000404816 TMEM132EQ6IEE7 984 aa21.42■■□□□ 1.02
LTBP1-203ENST00000404816 PDRG1Q9NUG6 133 aa21.42■■□□□ 1.02
LTBP1-203ENST00000404816 URI1O94763 535 aaPredicted RBP21.41■■□□□ 1.02
LTBP1-203ENST00000404816 ERLIN2O94905 339 aa21.41■■□□□ 1.02
LTBP1-203ENST00000404816 PRKAR2BP31323 418 aa21.41■■□□□ 1.02
LTBP1-203ENST00000404816 CDK5RAP3Q96JB5 506 aa21.41■■□□□ 1.02
LTBP1-203ENST00000404816 GOLGA6L7A0A1B0GV03 622 aa21.41■■□□□ 1.02
LTBP1-203ENST00000404816 DDX54Q8TDD1 881 aaKnown RBP21.41■■□□□ 1.02
LTBP1-203ENST00000404816 SRRTQ9BXP5 876 aaKnown RBP21.41■■□□□ 1.02
LTBP1-203ENST00000404816 MIA2Q96PC5 1412 aa21.41■■□□□ 1.02
LTBP1-203ENST00000404816 SEPT7Q16181 437 aaKnown RBP21.41■■□□□ 1.02
LTBP1-203ENST00000404816 TNPO1Q92973 898 aaKnown RBP21.41■■□□□ 1.02
LTBP1-203ENST00000404816 ZNF830Q96NB3 372 aaPredicted RBP21.4■■□□□ 1.02
LTBP1-203ENST00000404816 LARP6Q9BRS8 491 aaKnown RBP21.4■■□□□ 1.02
LTBP1-203ENST00000404816 MAP3K11Q16584 847 aa21.4■■□□□ 1.02
LTBP1-203ENST00000404816 PNISRQ8TF01 805 aaKnown RBP21.4■■□□□ 1.02
LTBP1-203ENST00000404816 GNAI2P04899 355 aa21.39■■□□□ 1.02
LTBP1-203ENST00000404816 GDPD2Q9HCC8 539 aa21.39■■□□□ 1.02
LTBP1-203ENST00000404816 CBFA2T2O43439 604 aa21.39■■□□□ 1.02
LTBP1-203ENST00000404816 CFAP100Q494V2 611 aa21.39■■□□□ 1.02
LTBP1-203ENST00000404816 ZHX3Q9H4I2 956 aa21.39■■□□□ 1.01
LTBP1-203ENST00000404816 CFTRP13569 1480 aa21.39■■□□□ 1.01
LTBP1-203ENST00000404816 CASQ1P31415 396 aa21.39■■□□□ 1.01
LTBP1-203ENST00000404816 DYDC1Q8WWB3 177 aa21.39■■□□□ 1.01
LTBP1-203ENST00000404816 CEP57L1Q8IYX8 460 aa21.38■■□□□ 1.01
LTBP1-203ENST00000404816 TBC1D2Q9BYX2 928 aa21.38■■□□□ 1.01
LTBP1-203ENST00000404816 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
LTBP1-203ENST00000404816 RNF187Q5TA31 235 aaPredicted RBP21.38■■□□□ 1.01
LTBP1-203ENST00000404816 ZRSR2Q15696 482 aaKnown RBP21.38■■□□□ 1.01
LTBP1-203ENST00000404816 KRT18P05783 430 aaKnown RBP21.37■■□□□ 1.01
LTBP1-203ENST00000404816 SMARCA5O60264 1052 aaPredicted RBP21.37■■□□□ 1.01
LTBP1-203ENST00000404816 KIAA1328Q86T90 577 aa21.37■■□□□ 1.01
LTBP1-203ENST00000404816 CCDC83Q8IWF9 413 aa21.37■■□□□ 1.01
LTBP1-203ENST00000404816 SEPT11Q9NVA2 429 aaKnown RBP21.37■■□□□ 1.01
LTBP1-203ENST00000404816 CIZ1Q9ULV3 898 aaPredicted RBP21.37■■□□□ 1.01
LTBP1-203ENST00000404816 IL1RAPL2Q9NP60 686 aa21.37■■□□□ 1.01
LTBP1-203ENST00000404816 CALCOCO1Q9P1Z2 691 aa21.37■■□□□ 1.01
LTBP1-203ENST00000404816 CLIP2Q9UDT6 1046 aa21.37■■□□□ 1.01
LTBP1-203ENST00000404816 BBXQ8WY36 941 aaPredicted RBP21.36■■□□□ 1.01
LTBP1-203ENST00000404816 CKAP2LQ8IYA6 745 aa21.36■■□□□ 1.01
LTBP1-203ENST00000404816 NLRP2Q9NX02 1062 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms