RNA–Protein interactions for RNA: ENST00000404125.5

PSME4-202, Transcript of proteasome activator subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSME4, Length 7,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-202ENST00000404125 MPHOSPH10O00566 681 aaKnown RBP16.51■□□□□ 0.23
PSME4-202ENST00000404125 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
PSME4-202ENST00000404125 BRPF1P55201 1214 aaPredicted RBP16.5■□□□□ 0.23
PSME4-202ENST00000404125 C20orf194Q5TEA3 1177 aa16.5■□□□□ 0.23
PSME4-202ENST00000404125 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
PSME4-202ENST00000404125 NEK4P51957 841 aa16.5■□□□□ 0.23
PSME4-202ENST00000404125 TMEM132AQ24JP5 1023 aa16.5■□□□□ 0.23
PSME4-202ENST00000404125 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
PSME4-202ENST00000404125 NCKAP5LQ9HCH0 1330 aa16.49■□□□□ 0.23
PSME4-202ENST00000404125 ATP5J2-PTCD1G3V325 749 aa16.49■□□□□ 0.23
PSME4-202ENST00000404125 ROCK1Q13464 1354 aa16.49■□□□□ 0.23
PSME4-202ENST00000404125 CPLX2Q6PUV4 134 aaKnown RBP16.48■□□□□ 0.23
PSME4-202ENST00000404125 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
PSME4-202ENST00000404125 NAP1L1P55209 391 aaKnown RBP16.48■□□□□ 0.23
PSME4-202ENST00000404125 GRM1Q13255 1194 aa16.48■□□□□ 0.23
PSME4-202ENST00000404125 SKIDA1Q1XH10 827 aa16.48■□□□□ 0.23
PSME4-202ENST00000404125 LRRFIP1Q32MZ4 808 aaKnown RBP16.48■□□□□ 0.23
PSME4-202ENST00000404125 KIF14Q15058 1648 aa16.48■□□□□ 0.23
PSME4-202ENST00000404125 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
PSME4-202ENST00000404125 DDX17Q92841 729 aaKnown RBP16.48■□□□□ 0.23
PSME4-202ENST00000404125 TBC1D2BQ9UPU7 963 aa16.48■□□□□ 0.23
PSME4-202ENST00000404125 KIF3AQ9Y496 699 aa16.48■□□□□ 0.23
PSME4-202ENST00000404125 ZHX3Q9H4I2 956 aa16.48■□□□□ 0.23
PSME4-202ENST00000404125 PATL2C9JE40 543 aaKnown RBP16.48■□□□□ 0.23
PSME4-202ENST00000404125 IDH1O75874 414 aaKnown RBP16.48■□□□□ 0.23
PSME4-202ENST00000404125 C8orf37Q96NL8 207 aa16.48■□□□□ 0.23
PSME4-202ENST00000404125 CCDC82Q8N4S0 544 aa16.47■□□□□ 0.23
PSME4-202ENST00000404125 TMEM57Q8N5G2 664 aa16.47■□□□□ 0.23
PSME4-202ENST00000404125 ZBTB3Q9H5J0 574 aa16.47■□□□□ 0.23
PSME4-202ENST00000404125 HMGXB3Q12766 1538 aa16.47■□□□□ 0.23
PSME4-202ENST00000404125 CCDC158Q5M9N0 1113 aa16.47■□□□□ 0.23
PSME4-202ENST00000404125 PDILTQ8N807 584 aa16.47■□□□□ 0.23
PSME4-202ENST00000404125 CCDC34Q96HJ3 373 aa16.47■□□□□ 0.23
PSME4-202ENST00000404125 TMOD3Q9NYL9 352 aa16.47■□□□□ 0.23
PSME4-202ENST00000404125 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
PSME4-202ENST00000404125 KRT28Q7Z3Y7 464 aa16.46■□□□□ 0.23
PSME4-202ENST00000404125 HFM1A2PYH4 1435 aa16.46■□□□□ 0.23
PSME4-202ENST00000404125 RAI14Q9P0K7 980 aa16.46■□□□□ 0.23
PSME4-202ENST00000404125 PAXIP1Q6ZW49 1069 aaPredicted RBP16.46■□□□□ 0.23
PSME4-202ENST00000404125 TPM3P06753 285 aa16.46■□□□□ 0.23
PSME4-202ENST00000404125 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.22
PSME4-202ENST00000404125 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
PSME4-202ENST00000404125 DUSP27Q5VZP5 1158 aa16.45■□□□□ 0.22
PSME4-202ENST00000404125 ANKIB1Q9P2G1 1089 aa16.45■□□□□ 0.22
PSME4-202ENST00000404125 SLC52A1Q9NWF4 448 aa16.45■□□□□ 0.22
PSME4-202ENST00000404125 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
PSME4-202ENST00000404125 USP5P45974 858 aa16.45■□□□□ 0.22
PSME4-202ENST00000404125 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
PSME4-202ENST00000404125 TSR1Q2NL82 804 aaKnown RBP16.44■□□□□ 0.22
PSME4-202ENST00000404125 CCDC61Q9Y6R9 512 aa16.44■□□□□ 0.22
PSME4-202ENST00000404125 CCDC8Q9H0W5 538 aaPredicted RBP16.44■□□□□ 0.22
PSME4-202ENST00000404125 FIBPO43427 364 aa16.43■□□□□ 0.22
PSME4-202ENST00000404125 RAB11FIP4Q86YS3 637 aa16.43■□□□□ 0.22
PSME4-202ENST00000404125 BOLA2Q9H3K6 86 aa16.43■□□□□ 0.22
PSME4-202ENST00000404125 CDC45O75419 566 aa16.43■□□□□ 0.22
PSME4-202ENST00000404125 LRP2BPQ9P2M1 347 aa16.43■□□□□ 0.22
PSME4-202ENST00000404125 LRRCC1Q9C099 1032 aa16.43■□□□□ 0.22
PSME4-202ENST00000404125 DDX11L8A8MPP1 907 aa16.43■□□□□ 0.22
PSME4-202ENST00000404125 ZFYVE27Q5T4F4 411 aa16.43■□□□□ 0.22
PSME4-202ENST00000404125 NOS1P29475 1434 aa16.43■□□□□ 0.22
PSME4-202ENST00000404125 NINLQ9Y2I6 1382 aa16.42■□□□□ 0.22
PSME4-202ENST00000404125 ZPR1O75312 459 aa16.42■□□□□ 0.22
PSME4-202ENST00000404125 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
PSME4-202ENST00000404125 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
PSME4-202ENST00000404125 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
PSME4-202ENST00000404125 BRD4O60885 1362 aaPredicted RBP16.42■□□□□ 0.22
PSME4-202ENST00000404125 MINDY4BA8MYZ0 360 aa16.42■□□□□ 0.22
PSME4-202ENST00000404125 LRRC59Q96AG4 307 aaKnown RBP16.41■□□□□ 0.22
PSME4-202ENST00000404125 SAFBQ15424 915 aaKnown RBP eCLIP16.41■□□□□ 0.22
PSME4-202ENST00000404125 SPC24Q8NBT2 197 aa16.41■□□□□ 0.22
PSME4-202ENST00000404125 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
PSME4-202ENST00000404125 PLEKHH2Q8IVE3 1493 aa16.41■□□□□ 0.22
PSME4-202ENST00000404125 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
PSME4-202ENST00000404125 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
PSME4-202ENST00000404125 CAVIN1Q6NZI2 390 aaKnown RBP16.4■□□□□ 0.22
PSME4-202ENST00000404125 GNAI3P08754 354 aa16.4■□□□□ 0.22
PSME4-202ENST00000404125 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.4■□□□□ 0.224e-14■■□□□ 11.9
PSME4-202ENST00000404125 HSP90AB4PQ58FF6 505 aa16.4■□□□□ 0.22
PSME4-202ENST00000404125 CCDC144CPQ8IYA2 1237 aa16.4■□□□□ 0.22
PSME4-202ENST00000404125 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
PSME4-202ENST00000404125 IQSEC3Q9UPP2 1182 aaPredicted RBP16.4■□□□□ 0.22
PSME4-202ENST00000404125 TDO2P48775 406 aa16.4■□□□□ 0.22
PSME4-202ENST00000404125 SASS6Q6UVJ0 657 aa16.4■□□□□ 0.22
PSME4-202ENST00000404125 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
PSME4-202ENST00000404125 UBAP1LF5GYI3 381 aa16.4■□□□□ 0.22
PSME4-202ENST00000404125 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
PSME4-202ENST00000404125 TPM2P07951 284 aa16.39■□□□□ 0.21
PSME4-202ENST00000404125 TAF7Q15545 349 aaPredicted RBP16.39■□□□□ 0.21
PSME4-202ENST00000404125 JAG2Q9Y219 1238 aa16.39■□□□□ 0.21
PSME4-202ENST00000404125 ABCC5O15440 1437 aa16.39■□□□□ 0.21
PSME4-202ENST00000404125 HOMER1Q86YM7 354 aa16.39■□□□□ 0.21
PSME4-202ENST00000404125 FANCAO15360 1455 aa16.39■□□□□ 0.21
PSME4-202ENST00000404125 TSPOAP1O95153 1857 aa16.39■□□□□ 0.21
PSME4-202ENST00000404125 PTMSP20962 102 aa16.38■□□□□ 0.21
PSME4-202ENST00000404125 ATF7IPQ6VMQ6 1270 aa16.38■□□□□ 0.21
PSME4-202ENST00000404125 POGZQ7Z3K3 1410 aa16.38■□□□□ 0.21
PSME4-202ENST00000404125 EPS15P42566 896 aa16.37■□□□□ 0.21
PSME4-202ENST00000404125 SNRKQ9NRH2 765 aa16.37■□□□□ 0.21
PSME4-202ENST00000404125 CCDC141Q6ZP82 1450 aa16.37■□□□□ 0.21
PSME4-202ENST00000404125 NAIPQ13075 1403 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms