RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 THSD7AQ9UPZ6 1657 aa18.64■□□□□ 0.57
SDF4-203ENST00000403997 USP31Q70CQ4 1352 aa18.64■□□□□ 0.57
SDF4-203ENST00000403997 NINLQ9Y2I6 1382 aa18.64■□□□□ 0.57
SDF4-203ENST00000403997 CRB1P82279 1406 aa18.64■□□□□ 0.57
SDF4-203ENST00000403997 MON2Q7Z3U7 1717 aa18.63■□□□□ 0.57
SDF4-203ENST00000403997 CSB-PGBD3P0DP91 1061 aa18.63■□□□□ 0.57
SDF4-203ENST00000403997 BAG6P46379 1132 aa18.63■□□□□ 0.57
SDF4-203ENST00000403997 FAM196AQ6ZSG2 479 aa18.63■□□□□ 0.57
SDF4-203ENST00000403997 SRCAPQ6ZRS2 3230 aa18.61■□□□□ 0.57
SDF4-203ENST00000403997 WDR17Q8IZU2 1322 aa18.61■□□□□ 0.57
SDF4-203ENST00000403997 CDCA8Q53HL2 280 aa18.61■□□□□ 0.57
SDF4-203ENST00000403997 COL18A1P39060 1754 aa18.6■□□□□ 0.57
SDF4-203ENST00000403997 TRIM37O94972 964 aa18.59■□□□□ 0.57
SDF4-203ENST00000403997 NFAT5O94916 1531 aa18.59■□□□□ 0.57
SDF4-203ENST00000403997 CARD10Q9BWT7 1032 aa18.58■□□□□ 0.56
SDF4-203ENST00000403997 EN1Q05925 392 aaPredicted RBP18.57■□□□□ 0.56
SDF4-203ENST00000403997 COG3Q96JB2 828 aa18.57■□□□□ 0.56
SDF4-203ENST00000403997 ANKRD36BQ8N2N9 1353 aa18.56■□□□□ 0.56
SDF4-203ENST00000403997 DDB1Q16531 1140 aa18.56■□□□□ 0.56
SDF4-203ENST00000403997 CDCA7Q9BWT1 371 aaPredicted RBP18.55■□□□□ 0.56
SDF4-203ENST00000403997 APBA3O96018 575 aa18.54■□□□□ 0.56
SDF4-203ENST00000403997 RGPD5Q99666 1765 aa18.54■□□□□ 0.56
SDF4-203ENST00000403997 OVOS2A0A0J9YW53 1432 aa18.53■□□□□ 0.56
SDF4-203ENST00000403997 OVOS2Q6IE36 1432 aa18.53■□□□□ 0.56
SDF4-203ENST00000403997 NLRP2Q9NX02 1062 aa18.53■□□□□ 0.56
SDF4-203ENST00000403997 C11orf95C9JLR9 678 aaPredicted RBP18.52■□□□□ 0.56
SDF4-203ENST00000403997 ANKRD24Q8TF21 1146 aa18.52■□□□□ 0.56
SDF4-203ENST00000403997 USP54Q70EL1 1684 aa18.52■□□□□ 0.56
SDF4-203ENST00000403997 EXOC5O00471 708 aa18.51■□□□□ 0.55
SDF4-203ENST00000403997 FYB1O15117 783 aa18.51■□□□□ 0.55
SDF4-203ENST00000403997 FBLN1P23142 703 aa18.51■□□□□ 0.55
SDF4-203ENST00000403997 EZH2Q15910 746 aaKnown RBP18.51■□□□□ 0.55
SDF4-203ENST00000403997 IP6K1Q92551 441 aa18.51■□□□□ 0.55
SDF4-203ENST00000403997 GGNBP2Q9H3C7 697 aa18.51■□□□□ 0.55
SDF4-203ENST00000403997 CCDC7Q96M83 1385 aa18.51■□□□□ 0.55
SDF4-203ENST00000403997 RGPD1P0DJD0 1748 aa18.51■□□□□ 0.55
SDF4-203ENST00000403997 ERBB3P21860 1342 aa18.5■□□□□ 0.55
SDF4-203ENST00000403997 ABCC6O95255 1503 aa18.5■□□□□ 0.55
SDF4-203ENST00000403997 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.557e-9■■■■■ 34.9
SDF4-203ENST00000403997 POLR3GLQ9BT43 218 aa18.5■□□□□ 0.55
SDF4-203ENST00000403997 PARP4Q9UKK3 1724 aaKnown RBP18.49■□□□□ 0.55
SDF4-203ENST00000403997 AMPHP49418 695 aa18.49■□□□□ 0.55
SDF4-203ENST00000403997 LTV1Q96GA3 475 aaPredicted RBP18.49■□□□□ 0.55
SDF4-203ENST00000403997 CAMKK2Q96RR4 588 aa18.49■□□□□ 0.55
SDF4-203ENST00000403997 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
SDF4-203ENST00000403997 MARCH10Q8NA82 808 aaPredicted RBP18.48■□□□□ 0.55
SDF4-203ENST00000403997 CARD14Q9BXL6 1004 aa18.48■□□□□ 0.55
SDF4-203ENST00000403997 OVOS2A0A0G2JMS6 1433 aa18.48■□□□□ 0.55
SDF4-203ENST00000403997 MAP3K19Q56UN5 1328 aa18.48■□□□□ 0.55
SDF4-203ENST00000403997 HSPA5P11021 654 aaKnown RBP18.47■□□□□ 0.55
SDF4-203ENST00000403997 LTN1O94822 1766 aa18.47■□□□□ 0.55
SDF4-203ENST00000403997 PSDA5PKW4 1024 aaPredicted RBP18.46■□□□□ 0.55
SDF4-203ENST00000403997 IL2RBP14784 551 aa18.45■□□□□ 0.54
SDF4-203ENST00000403997 HOXC9P31274 260 aa18.45■□□□□ 0.54
SDF4-203ENST00000403997 RRS1Q15050 365 aaKnown RBP18.45■□□□□ 0.54
SDF4-203ENST00000403997 TNS1Q9HBL0 1735 aaKnown RBP18.45■□□□□ 0.54
SDF4-203ENST00000403997 LRRC37A3O60309 1634 aa18.44■□□□□ 0.54
SDF4-203ENST00000403997 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
SDF4-203ENST00000403997 NSD3Q9BZ95 1437 aa18.42■□□□□ 0.54
SDF4-203ENST00000403997 R3HDM1Q15032 1099 aaKnown RBP18.42■□□□□ 0.54
SDF4-203ENST00000403997 BCL11BQ9C0K0 894 aaPredicted RBP18.42■□□□□ 0.54
SDF4-203ENST00000403997 PTF1AQ7RTS3 328 aa18.41■□□□□ 0.54
SDF4-203ENST00000403997 WNK3Q9BYP7 1800 aa18.41■□□□□ 0.54
SDF4-203ENST00000403997 PEAK1Q9H792 1746 aa18.4■□□□□ 0.54
SDF4-203ENST00000403997 CGNL1Q0VF96 1302 aa18.39■□□□□ 0.53
SDF4-203ENST00000403997 BCL9O00512 1426 aa18.39■□□□□ 0.53
SDF4-203ENST00000403997 TNS2Q63HR2 1409 aa18.39■□□□□ 0.53
SDF4-203ENST00000403997 PLSCR1O15162 318 aa18.38■□□□□ 0.53
SDF4-203ENST00000403997 NBPF14Q5TI25 921 aa18.38■□□□□ 0.53
SDF4-203ENST00000403997 RTL1A6NKG5 1358 aa18.38■□□□□ 0.53
SDF4-203ENST00000403997 MYOM1P52179 1685 aa18.38■□□□□ 0.53
SDF4-203ENST00000403997 KCNQ2O43526 872 aa18.36■□□□□ 0.53
SDF4-203ENST00000403997 HSP90AB2PQ58FF8 381 aa18.36■□□□□ 0.53
SDF4-203ENST00000403997 DDX54Q8TDD1 881 aaKnown RBP18.36■□□□□ 0.53
SDF4-203ENST00000403997 ACSBG1Q96GR2 724 aa18.36■□□□□ 0.53
SDF4-203ENST00000403997 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
SDF4-203ENST00000403997 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
SDF4-203ENST00000403997 NBPF6Q5VWK0 638 aa18.35■□□□□ 0.53
SDF4-203ENST00000403997 NBPF4Q96M43 638 aa18.35■□□□□ 0.53
SDF4-203ENST00000403997 PANK3Q9H999 370 aa18.35■□□□□ 0.53
SDF4-203ENST00000403997 KIF20BQ96Q89 1820 aa18.35■□□□□ 0.53
SDF4-203ENST00000403997 SMG6Q86US8 1419 aaKnown RBP18.33■□□□□ 0.53
SDF4-203ENST00000403997 INSRP06213 1382 aa18.33■□□□□ 0.53
SDF4-203ENST00000403997 USHBP1Q8N6Y0 703 aa18.33■□□□□ 0.52
SDF4-203ENST00000403997 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
SDF4-203ENST00000403997 FLT4P35916 1363 aa18.32■□□□□ 0.52
SDF4-203ENST00000403997 ZCRB1Q8TBF4 217 aaKnown RBP18.32■□□□□ 0.52
SDF4-203ENST00000403997 KAT6BQ8WYB5 2073 aa18.32■□□□□ 0.52
SDF4-203ENST00000403997 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
SDF4-203ENST00000403997 KIF24Q5T7B8 1368 aa18.31■□□□□ 0.52
SDF4-203ENST00000403997 TNNT2P45379 298 aaPredicted RBP18.31■□□□□ 0.52
SDF4-203ENST00000403997 PROM2Q8N271 834 aa18.31■□□□□ 0.52
SDF4-203ENST00000403997 RAPGEF4Q8WZA2 1011 aa18.31■□□□□ 0.52
SDF4-203ENST00000403997 RREB1Q92766 1687 aa18.29■□□□□ 0.52
SDF4-203ENST00000403997 TATP17735 454 aaPredicted RBP18.29■□□□□ 0.52
SDF4-203ENST00000403997 TXNRD1Q16881 649 aa18.29■□□□□ 0.52
SDF4-203ENST00000403997 RGPD2P0DJD1 1756 aa18.28■□□□□ 0.52
SDF4-203ENST00000403997 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
SDF4-203ENST00000403997 NUP188Q5SRE5 1749 aa18.28■□□□□ 0.52
SDF4-203ENST00000403997 MEGF6O75095 1541 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms