RNA–Protein interactions for RNA: ENST00000403642.5

CHEK2-207, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best) BASIC

Gene CHEK2, Length 1,359 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-207ENST00000403642 CDCA8Q53HL2 280 aa14.18□□□□□ -0.14
CHEK2-207ENST00000403642 LARP1Q6PKG0 1096 aaKnown RBP14.18□□□□□ -0.14
CHEK2-207ENST00000403642 ARHGEF25Q86VW2 580 aa14.17□□□□□ -0.14
CHEK2-207ENST00000403642 USP35Q9P2H5 1018 aa14.17□□□□□ -0.14
CHEK2-207ENST00000403642 ABCC6O95255 1503 aa14.16□□□□□ -0.14
CHEK2-207ENST00000403642 EIF4G2P78344 907 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHEK2-207ENST00000403642 CRB1P82279 1406 aa14.15□□□□□ -0.14
CHEK2-207ENST00000403642 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
CHEK2-207ENST00000403642 KRT27Q7Z3Y8 459 aa14.15□□□□□ -0.14
CHEK2-207ENST00000403642 AXIN2Q9Y2T1 843 aa14.15□□□□□ -0.14
CHEK2-207ENST00000403642 LTN1O94822 1766 aa14.15□□□□□ -0.14
CHEK2-207ENST00000403642 RGPD5Q99666 1765 aa14.13□□□□□ -0.15
CHEK2-207ENST00000403642 BARGINQ6ZT62 677 aa14.12□□□□□ -0.15
CHEK2-207ENST00000403642 TCP11L2Q8N4U5 519 aa14.12□□□□□ -0.15
CHEK2-207ENST00000403642 KIF20BQ96Q89 1820 aa14.12□□□□□ -0.15
CHEK2-207ENST00000403642 WNK3Q9BYP7 1800 aa14.12□□□□□ -0.15
CHEK2-207ENST00000403642 WDR17Q8IZU2 1322 aa14.12□□□□□ -0.15
CHEK2-207ENST00000403642 TOM1L2Q6ZVM7 507 aa14.11□□□□□ -0.15
CHEK2-207ENST00000403642 COG3Q96JB2 828 aa14.11□□□□□ -0.15
CHEK2-207ENST00000403642 THRAP3Q9Y2W1 955 aaKnown RBP14.11□□□□□ -0.15
CHEK2-207ENST00000403642 BLMP54132 1417 aaPredicted RBP14.11□□□□□ -0.15
CHEK2-207ENST00000403642 NSD3Q9BZ95 1437 aa14.11□□□□□ -0.15
CHEK2-207ENST00000403642 PARP4Q9UKK3 1724 aaKnown RBP14.11□□□□□ -0.15
CHEK2-207ENST00000403642 POLR3GLQ9BT43 218 aa14.1□□□□□ -0.15
CHEK2-207ENST00000403642 LRRC37A3O60309 1634 aa14.1□□□□□ -0.15
CHEK2-207ENST00000403642 FAM182BQ5T319 152 aa14.09□□□□□ -0.15
CHEK2-207ENST00000403642 ERBB3P21860 1342 aa14.09□□□□□ -0.15
CHEK2-207ENST00000403642 FYB1O15117 783 aa14.09□□□□□ -0.15
CHEK2-207ENST00000403642 CSB-PGBD3P0DP91 1061 aa14.09□□□□□ -0.15
CHEK2-207ENST00000403642 CARD14Q9BXL6 1004 aa14.09□□□□□ -0.15
CHEK2-207ENST00000403642 GGNBP2Q9H3C7 697 aa14.09□□□□□ -0.15
CHEK2-207ENST00000403642 CCDC125Q86Z20 511 aa14.08□□□□□ -0.16
CHEK2-207ENST00000403642 FBLN1P23142 703 aa14.07□□□□□ -0.16
CHEK2-207ENST00000403642 MAP3K19Q56UN5 1328 aa14.06□□□□□ -0.16
CHEK2-207ENST00000403642 CARD10Q9BWT7 1032 aa14.06□□□□□ -0.16
CHEK2-207ENST00000403642 RGPD1P0DJD0 1748 aa14.06□□□□□ -0.16
CHEK2-207ENST00000403642 DISP2A7MBM2 1401 aa14.05□□□□□ -0.16
CHEK2-207ENST00000403642 TNS1Q9HBL0 1735 aaKnown RBP14.05□□□□□ -0.16
CHEK2-207ENST00000403642 CCDC7Q96M83 1385 aa14.05□□□□□ -0.16
CHEK2-207ENST00000403642 PDE3BQ13370 1112 aa14.05□□□□□ -0.16
CHEK2-207ENST00000403642 SF3B2Q13435 895 aaKnown RBP14.05□□□□□ -0.16
CHEK2-207ENST00000403642 ANKRD24Q8TF21 1146 aa14.05□□□□□ -0.16
CHEK2-207ENST00000403642 RTL1A6NKG5 1358 aa14.04□□□□□ -0.16
CHEK2-207ENST00000403642 FAM208AQ9UK61 1670 aaKnown RBP14.04□□□□□ -0.16
CHEK2-207ENST00000403642 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
CHEK2-207ENST00000403642 RRS1Q15050 365 aaKnown RBP14.04□□□□□ -0.16
CHEK2-207ENST00000403642 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
CHEK2-207ENST00000403642 IP6K1Q92551 441 aa14.04□□□□□ -0.16
CHEK2-207ENST00000403642 HOXC9P31274 260 aa14.03□□□□□ -0.16
CHEK2-207ENST00000403642 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
CHEK2-207ENST00000403642 CGNL1Q0VF96 1302 aa14.03□□□□□ -0.16
CHEK2-207ENST00000403642 PEAK1Q9H792 1746 aa14.02□□□□□ -0.16
CHEK2-207ENST00000403642 OVOS2A0A0G2JMS6 1433 aa14.02□□□□□ -0.16
CHEK2-207ENST00000403642 AMPHP49418 695 aa14.02□□□□□ -0.17
CHEK2-207ENST00000403642 DDB1Q16531 1140 aa14.02□□□□□ -0.17
CHEK2-207ENST00000403642 FAM196AQ6ZSG2 479 aa14.02□□□□□ -0.17
CHEK2-207ENST00000403642 NLRP2Q9NX02 1062 aa14.02□□□□□ -0.17
CHEK2-207ENST00000403642 ANKRD26Q9UPS8 1709 aa14.02□□□□□ -0.17
CHEK2-207ENST00000403642 TNS2Q63HR2 1409 aa14.01□□□□□ -0.17
CHEK2-207ENST00000403642 LTV1Q96GA3 475 aaPredicted RBP14.01□□□□□ -0.17
CHEK2-207ENST00000403642 CDCA7Q9BWT1 371 aaPredicted RBP14.01□□□□□ -0.17
CHEK2-207ENST00000403642 KIF7Q2M1P5 1343 aa14.01□□□□□ -0.17
CHEK2-207ENST00000403642 PANK3Q9H999 370 aa14□□□□□ -0.17
CHEK2-207ENST00000403642 TRIM37O94972 964 aa13.99□□□□□ -0.17
CHEK2-207ENST00000403642 BAG6P46379 1132 aa13.99□□□□□ -0.17
CHEK2-207ENST00000403642 FLT4P35916 1363 aa13.99□□□□□ -0.17
CHEK2-207ENST00000403642 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
CHEK2-207ENST00000403642 RGPD2P0DJD1 1756 aa13.97□□□□□ -0.17
CHEK2-207ENST00000403642 IL2RBP14784 551 aa13.97□□□□□ -0.17
CHEK2-207ENST00000403642 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
CHEK2-207ENST00000403642 KIF24Q5T7B8 1368 aa13.97□□□□□ -0.17
CHEK2-207ENST00000403642 EN1Q05925 392 aaPredicted RBP13.96□□□□□ -0.17
CHEK2-207ENST00000403642 MARCH10Q8NA82 808 aaPredicted RBP13.96□□□□□ -0.17
CHEK2-207ENST00000403642 NSD2O96028 1365 aa13.96□□□□□ -0.17
CHEK2-207ENST00000403642 INSRP06213 1382 aa13.96□□□□□ -0.17
CHEK2-207ENST00000403642 EXOC5O00471 708 aa13.96□□□□□ -0.18
CHEK2-207ENST00000403642 HSP90AB2PQ58FF8 381 aa13.96□□□□□ -0.18
CHEK2-207ENST00000403642 BCL9O00512 1426 aa13.96□□□□□ -0.18
CHEK2-207ENST00000403642 SBF2Q86WG5 1849 aa13.95□□□□□ -0.18
CHEK2-207ENST00000403642 MEGF6O75095 1541 aa13.95□□□□□ -0.18
CHEK2-207ENST00000403642 PPM1GO15355 546 aaPredicted RBP13.94□□□□□ -0.18
CHEK2-207ENST00000403642 APBA3O96018 575 aa13.94□□□□□ -0.18
CHEK2-207ENST00000403642 RREB1Q92766 1687 aa13.93□□□□□ -0.18
CHEK2-207ENST00000403642 TNNT2P45379 298 aaPredicted RBP13.93□□□□□ -0.18
CHEK2-207ENST00000403642 EZH2Q15910 746 aaKnown RBP13.93□□□□□ -0.18
CHEK2-207ENST00000403642 NBPF6Q5VWK0 638 aa13.93□□□□□ -0.18
CHEK2-207ENST00000403642 USHBP1Q8N6Y0 703 aa13.93□□□□□ -0.18
CHEK2-207ENST00000403642 NBPF4Q96M43 638 aa13.93□□□□□ -0.18
CHEK2-207ENST00000403642 SHANK3Q9BYB0 1731 aa13.92□□□□□ -0.18
CHEK2-207ENST00000403642 WASHC2AQ641Q2 1341 aa13.92□□□□□ -0.18
CHEK2-207ENST00000403642 NHSQ6T4R5 1651 aa13.92□□□□□ -0.18
CHEK2-207ENST00000403642 POLKQ9UBT6 870 aa13.92□□□□□ -0.18
CHEK2-207ENST00000403642 KNSTRNQ9Y448 316 aa13.92□□□□□ -0.18
CHEK2-207ENST00000403642 MAP2P11137 1827 aaKnown RBP13.92□□□□□ -0.18
CHEK2-207ENST00000403642 PARD3Q8TEW0 1356 aa13.91□□□□□ -0.18
CHEK2-207ENST00000403642 CAMKK2Q96RR4 588 aa13.91□□□□□ -0.18
CHEK2-207ENST00000403642 RGPD3A6NKT7 1758 aaPredicted RBP13.91□□□□□ -0.18
CHEK2-207ENST00000403642 RGPD4Q7Z3J3 1758 aa13.91□□□□□ -0.18
CHEK2-207ENST00000403642 NUP188Q5SRE5 1749 aa13.91□□□□□ -0.18
CHEK2-207ENST00000403642 PTF1AQ7RTS3 328 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms