RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 C6orf132Q5T0Z8 1188 aa5.34□□□□□ -1.55
CCDC178-204ENST00000403303 PPP1R3GB7ZBB8 358 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 ATP9BO43861 1147 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 CD46P15529 392 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 SSFA2P28290 1259 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 OXLD1Q5BKU9 147 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 ZNF326Q5BKZ1 582 aaKnown RBP5.33□□□□□ -1.56
CCDC178-204ENST00000403303 MAP10Q9P2G4 905 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 SPTLC1O15269 473 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 NUP160Q12769 1436 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 TMEM87AQ8NBN3 555 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 HINFPQ9BQA5 517 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 ZBTB3Q9H5J0 574 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 PRKAG2Q9UGJ0 569 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 PCDHB9Q9Y5E1 797 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 KIF3CO14782 793 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 HDLBPQ00341 1268 aaKnown RBP5.33□□□□□ -1.56
CCDC178-204ENST00000403303 OGFOD1Q8N543 542 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 UBE2Q2Q8WVN8 375 aa5.33□□□□□ -1.56
CCDC178-204ENST00000403303 PATL2C9JE40 543 aaKnown RBP5.32□□□□□ -1.56
CCDC178-204ENST00000403303 OATP04181 439 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 ANKRD13AQ8IZ07 590 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 MRPL42Q9Y6G3 142 aaKnown RBP5.32□□□□□ -1.56
CCDC178-204ENST00000403303 ZNF394Q53GI3 561 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 TPCN2Q8NHX9 752 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 RIMBP3CA6NJZ7 1639 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 RIMBP3BA6NNM3 1639 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 RIMBP3Q9UFD9 1639 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 ATN1P54259 1190 aaPredicted RBP5.32□□□□□ -1.56
CCDC178-204ENST00000403303 PDE4CQ08493 712 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 CCDC144BQ3MJ40 725 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 UBXN4Q92575 508 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 PSMD1Q99460 953 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 PNMA3Q9UL41 463 aa5.32□□□□□ -1.56
CCDC178-204ENST00000403303 CTTNBP2Q8WZ74 1663 aa5.31□□□□□ -1.56
CCDC178-204ENST00000403303 SFI1A8K8P3 1242 aa5.31□□□□□ -1.56
CCDC178-204ENST00000403303 HOXA2O43364 376 aa5.31□□□□□ -1.56
CCDC178-204ENST00000403303 WASHC4Q2M389 1173 aa5.31□□□□□ -1.56
CCDC178-204ENST00000403303 RBM46Q8TBY0 533 aaKnown RBP5.31□□□□□ -1.56
CCDC178-204ENST00000403303 ARID4AP29374 1257 aaPredicted RBP5.31□□□□□ -1.56
CCDC178-204ENST00000403303 CLDN10P78369 228 aa5.31□□□□□ -1.56
CCDC178-204ENST00000403303 TSKSQ9UJT2 592 aa5.31□□□□□ -1.56
CCDC178-204ENST00000403303 ZBBXA8MT70 800 aa5.3□□□□□ -1.56
CCDC178-204ENST00000403303 COL9A1P20849 921 aa5.3□□□□□ -1.56
CCDC178-204ENST00000403303 GTF3C2Q8WUA4 911 aaPredicted RBP5.3□□□□□ -1.56
CCDC178-204ENST00000403303 GNEQ9Y223 722 aaKnown RBP5.3□□□□□ -1.56
CCDC178-204ENST00000403303 MAGEB6P1A0A0J9YX57 407 aa5.3□□□□□ -1.56
CCDC178-204ENST00000403303 CEP170Q5SW79 1584 aa5.3□□□□□ -1.56
CCDC178-204ENST00000403303 MTMR2Q13614 643 aa5.3□□□□□ -1.56
CCDC178-204ENST00000403303 NLGN1Q8N2Q7 840 aa5.3□□□□□ -1.56
CCDC178-204ENST00000403303 FAM200AQ8TCP9 573 aa5.3□□□□□ -1.56
CCDC178-204ENST00000403303 TSEN2Q8NCE0 465 aaKnown RBP5.29□□□□□ -1.56
CCDC178-204ENST00000403303 CCDC136Q96JN2 1154 aa5.29□□□□□ -1.56
CCDC178-204ENST00000403303 CDCA7Q9BWT1 371 aaPredicted RBP5.29□□□□□ -1.56
CCDC178-204ENST00000403303 COLQQ9Y215 455 aaPredicted RBP5.29□□□□□ -1.56
CCDC178-204ENST00000403303 DNMT3AQ9Y6K1 912 aaPredicted RBP5.29□□□□□ -1.56
CCDC178-204ENST00000403303 FAM69CQ0P6D2 419 aa5.29□□□□□ -1.56
CCDC178-204ENST00000403303 NKX2-3Q8TAU0 364 aa5.29□□□□□ -1.56
CCDC178-204ENST00000403303 SBNO2Q9Y2G9 1366 aa5.29□□□□□ -1.56
CCDC178-204ENST00000403303 P4HBP07237 508 aaKnown RBP5.29□□□□□ -1.56
CCDC178-204ENST00000403303 CTHP32929 405 aa5.29□□□□□ -1.56
CCDC178-204ENST00000403303 TBCELQ5QJ74 424 aa5.29□□□□□ -1.56
CCDC178-204ENST00000403303 CDAN1Q8IWY9 1227 aa5.29□□□□□ -1.56
CCDC178-204ENST00000403303 VTI1BQ9UEU0 232 aa5.29□□□□□ -1.56
CCDC178-204ENST00000403303 FMNL1O95466 1100 aaPredicted RBP5.28□□□□□ -1.56
CCDC178-204ENST00000403303 C7P10643 843 aa5.28□□□□□ -1.56
CCDC178-204ENST00000403303 RNF135Q8IUD6 432 aa5.28□□□□□ -1.56
CCDC178-204ENST00000403303 MRS2Q9HD23 443 aa5.28□□□□□ -1.56
CCDC178-204ENST00000403303 MRVI1Q9Y6F6 885 aa5.28□□□□□ -1.56
CCDC178-204ENST00000403303 SAMD9Q5K651 1589 aa5.28□□□□□ -1.56
CCDC178-204ENST00000403303 MAP4K4O95819 1239 aaPredicted RBP5.28□□□□□ -1.56
CCDC178-204ENST00000403303 SLC10A3P09131 477 aa5.28□□□□□ -1.56
CCDC178-204ENST00000403303 PIK3R5Q8WYR1 880 aa5.28□□□□□ -1.56
CCDC178-204ENST00000403303 SYNJ2O15056 1496 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 FGD5Q6ZNL6 1462 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 PTGER2P43116 358 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 PTK7Q13308 1070 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 FAM163AQ96GL9 167 aaPredicted RBP5.27□□□□□ -1.57
CCDC178-204ENST00000403303 PRDM16Q9HAZ2 1276 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 KIF13AQ9H1H9 1805 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 PDE3BQ13370 1112 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 EAPPQ56P03 285 aaPredicted RBP5.27□□□□□ -1.57
CCDC178-204ENST00000403303 PPP1R18Q6NYC8 613 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 LARP1Q6PKG0 1096 aaKnown RBP5.27□□□□□ -1.57
CCDC178-204ENST00000403303 JAZF1Q86VZ6 243 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 ATCAYQ86WG3 371 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 DUSP9Q99956 384 aaKnown RBP5.27□□□□□ -1.57
CCDC178-204ENST00000403303 SLC52A1Q9NWF4 448 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 PPME1Q9Y570 386 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 GLI2P10070 1586 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 DIXDC1Q155Q3 683 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 TYW1BQ6NUM6 668 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 CCSER2Q9H7U1 834 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 KDM5BQ9UGL1 1544 aa5.27□□□□□ -1.57
CCDC178-204ENST00000403303 EIF4G2P78344 907 aaKnown RBP eCLIP5.26□□□□□ -1.57
CCDC178-204ENST00000403303 L3MBTL3Q96JM7 780 aaPredicted RBP5.26□□□□□ -1.57
CCDC178-204ENST00000403303 PPRC1Q5VV67 1664 aaKnown RBP5.26□□□□□ -1.57
CCDC178-204ENST00000403303 hCG_2014768A0A024R1R8 64 aa5.26□□□□□ -1.57
CCDC178-204ENST00000403303 PLCG2P16885 1265 aa5.26□□□□□ -1.57
CCDC178-204ENST00000403303 B4GALNT3Q6L9W6 998 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms