RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 COLQQ9Y215 455 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P20-201ENST00000402555 ACEP12821 1306 aa8.24□□□□□ -1.09
HMGB1P20-201ENST00000402555 ALS2Q96Q42 1657 aa8.24□□□□□ -1.09
HMGB1P20-201ENST00000402555 ARHGEF10O15013 1369 aa8.23□□□□□ -1.09
HMGB1P20-201ENST00000402555 ATRNO75882 1429 aa8.23□□□□□ -1.09
HMGB1P20-201ENST00000402555 RBM6P78332 1123 aaKnown RBP8.23□□□□□ -1.09
HMGB1P20-201ENST00000402555 NUTM2GQ5VZR2 741 aa8.23□□□□□ -1.09
HMGB1P20-201ENST00000402555 BCL9LQ86UU0 1499 aa8.23□□□□□ -1.09
HMGB1P20-201ENST00000402555 PPIP5K1Q6PFW1 1433 aa8.22□□□□□ -1.09
HMGB1P20-201ENST00000402555 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
HMGB1P20-201ENST00000402555 CARD11Q9BXL7 1154 aa8.22□□□□□ -1.09
HMGB1P20-201ENST00000402555 TRPC5Q9UL62 973 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P20-201ENST00000402555 SLIT2O94813 1529 aa8.22□□□□□ -1.09
HMGB1P20-201ENST00000402555 POLR3AO14802 1390 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P20-201ENST00000402555 RALGAPBQ86X10 1494 aa8.21□□□□□ -1.09
HMGB1P20-201ENST00000402555 CDK12Q9NYV4 1490 aaPredicted RBP8.21□□□□□ -1.09
HMGB1P20-201ENST00000402555 CHRM1P11229 460 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P20-201ENST00000402555 CABP1Q9NZU7 370 aa8.21□□□□□ -1.1
HMGB1P20-201ENST00000402555 PLCH1Q4KWH8 1693 aa8.21□□□□□ -1.1
HMGB1P20-201ENST00000402555 CRYBG1Q9Y4K1 1723 aa8.2□□□□□ -1.1
HMGB1P20-201ENST00000402555 FAM83GA6ND36 823 aa8.2□□□□□ -1.1
HMGB1P20-201ENST00000402555 SEC24BO95487 1268 aa8.2□□□□□ -1.1
HMGB1P20-201ENST00000402555 UNC5CLQ8IV45 518 aa8.2□□□□□ -1.1
HMGB1P20-201ENST00000402555 PCDHB8Q9UN66 801 aa8.2□□□□□ -1.1
HMGB1P20-201ENST00000402555 EVC2Q86UK5 1308 aa8.2□□□□□ -1.1
HMGB1P20-201ENST00000402555 GLI3P10071 1580 aa8.19□□□□□ -1.1
HMGB1P20-201ENST00000402555 SPOCK2Q92563 424 aa8.19□□□□□ -1.1
HMGB1P20-201ENST00000402555 GJD4Q96KN9 370 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P20-201ENST00000402555 SCUBE2Q9NQ36 999 aa8.19□□□□□ -1.1
HMGB1P20-201ENST00000402555 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.19□□□□□ -1.1
HMGB1P20-201ENST00000402555 PHRF1Q9P1Y6 1649 aaKnown RBP8.18□□□□□ -1.1
HMGB1P20-201ENST00000402555 ZC3H6P61129 1189 aaKnown RBP8.18□□□□□ -1.1
HMGB1P20-201ENST00000402555 CHRNA2Q15822 529 aa8.18□□□□□ -1.1
HMGB1P20-201ENST00000402555 ABTB2Q8N961 1025 aa8.18□□□□□ -1.1
HMGB1P20-201ENST00000402555 UPF1Q92900 1129 aaKnown RBP eCLIP8.18□□□□□ -1.1
HMGB1P20-201ENST00000402555 BTG4Q9NY30 223 aa8.18□□□□□ -1.1
HMGB1P20-201ENST00000402555 CCDC9Q9Y3X0 531 aaKnown RBP8.18□□□□□ -1.1
HMGB1P20-201ENST00000402555 USP6P35125 1406 aa8.18□□□□□ -1.1
HMGB1P20-201ENST00000402555 NRAPQ86VF7 1730 aa8.17□□□□□ -1.1
HMGB1P20-201ENST00000402555 NWD2Q9ULI1 1742 aa8.17□□□□□ -1.1
HMGB1P20-201ENST00000402555 ZNF467Q7Z7K2 595 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P20-201ENST00000402555 PRDM11Q9NQV5 511 aa8.17□□□□□ -1.1
HMGB1P20-201ENST00000402555 KIAA0232Q92628 1395 aa8.17□□□□□ -1.1
HMGB1P20-201ENST00000402555 COL14A1Q05707 1796 aaKnown RBP8.17□□□□□ -1.1
HMGB1P20-201ENST00000402555 ST20-MTHFSA0A0A6YYL1 179 aa8.16□□□□□ -1.1
HMGB1P20-201ENST00000402555 IRX5P78411 483 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P20-201ENST00000402555 VPS72Q15906 364 aa8.16□□□□□ -1.1
HMGB1P20-201ENST00000402555 NRKQ7Z2Y5 1582 aa8.16□□□□□ -1.1
HMGB1P20-201ENST00000402555 SBNO2Q9Y2G9 1366 aa8.16□□□□□ -1.1
HMGB1P20-201ENST00000402555 AKAP12Q02952 1782 aa8.15□□□□□ -1.1
HMGB1P20-201ENST00000402555 SSH2Q76I76 1423 aa8.15□□□□□ -1.1
HMGB1P20-201ENST00000402555 ATAD2Q6PL18 1390 aa8.15□□□□□ -1.1
HMGB1P20-201ENST00000402555 USP19O94966 1318 aa8.15□□□□□ -1.1
HMGB1P20-201ENST00000402555 ZBTB7CA1YPR0 619 aa8.15□□□□□ -1.1
HMGB1P20-201ENST00000402555 EP400Q96L91 3159 aa8.15□□□□□ -1.11
HMGB1P20-201ENST00000402555 BRWD3Q6RI45 1802 aa8.15□□□□□ -1.11
HMGB1P20-201ENST00000402555 PIK3C2AO00443 1686 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 TTC21BQ7Z4L5 1316 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 A0A0G2JS52 829 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 NLRP6P59044 892 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 MYT1Q01538 1121 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 FAM98CQ17RN3 349 aaKnown RBP8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 NLRP13Q86W25 1043 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 SEPT12Q8IYM1 358 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 CCER1Q8TC90 406 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 TMC1Q8TDI8 760 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 TESK2Q96S53 571 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 SLC12A5Q9H2X9 1139 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 STRN4Q9NRL3 753 aa8.14□□□□□ -1.11
HMGB1P20-201ENST00000402555 CD163L1Q9NR16 1453 aa8.13□□□□□ -1.11
HMGB1P20-201ENST00000402555 CPSF1Q10570 1443 aaKnown RBP8.13□□□□□ -1.11
HMGB1P20-201ENST00000402555 BRD4O60885 1362 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P20-201ENST00000402555 KTN1Q86UP2 1357 aaKnown RBP8.13□□□□□ -1.11
HMGB1P20-201ENST00000402555 USP47Q96K76 1375 aa8.13□□□□□ -1.11
HMGB1P20-201ENST00000402555 SOX12O15370 315 aa8.13□□□□□ -1.11
HMGB1P20-201ENST00000402555 GCP02774 474 aa8.13□□□□□ -1.11
HMGB1P20-201ENST00000402555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.13□□□□□ -1.11
HMGB1P20-201ENST00000402555 MON2Q7Z3U7 1717 aa8.12□□□□□ -1.11
HMGB1P20-201ENST00000402555 CAMTA1Q9Y6Y1 1673 aa8.12□□□□□ -1.11
HMGB1P20-201ENST00000402555 SPATA31A5Q5VU36 1347 aa8.12□□□□□ -1.11
HMGB1P20-201ENST00000402555 SPATA31A7Q8IWB4 1347 aa8.12□□□□□ -1.11
HMGB1P20-201ENST00000402555 CLSPNQ9HAW4 1339 aa8.12□□□□□ -1.11
HMGB1P20-201ENST00000402555 PLCG2P16885 1265 aa8.12□□□□□ -1.11
HMGB1P20-201ENST00000402555 SLIT3O75094 1523 aa8.12□□□□□ -1.11
HMGB1P20-201ENST00000402555 LMO7Q8WWI1 1683 aa8.11□□□□□ -1.11
HMGB1P20-201ENST00000402555 CPDO75976 1380 aa8.11□□□□□ -1.11
HMGB1P20-201ENST00000402555 ONECUT3O60422 494 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P20-201ENST00000402555 EVA1CP58658 441 aa8.11□□□□□ -1.11
HMGB1P20-201ENST00000402555 LARP1Q6PKG0 1096 aaKnown RBP8.11□□□□□ -1.11
HMGB1P20-201ENST00000402555 NME9Q86XW9 330 aa8.11□□□□□ -1.11
HMGB1P20-201ENST00000402555 OCEL1Q9H607 264 aa8.11□□□□□ -1.11
HMGB1P20-201ENST00000402555 USP35Q9P2H5 1018 aa8.11□□□□□ -1.11
HMGB1P20-201ENST00000402555 A0A1W2PP64 1363 aa8.1□□□□□ -1.11
HMGB1P20-201ENST00000402555 SPATA31A1Q5TZJ5 1347 aa8.1□□□□□ -1.11
HMGB1P20-201ENST00000402555 TTC21AQ8NDW8 1320 aa8.1□□□□□ -1.11
HMGB1P20-201ENST00000402555 FAM182BQ5T319 152 aa8.1□□□□□ -1.11
HMGB1P20-201ENST00000402555 KRT27Q7Z3Y8 459 aa8.1□□□□□ -1.11
HMGB1P20-201ENST00000402555 HDGFL2Q7Z4V5 671 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P20-201ENST00000402555 CIZ1Q9ULV3 898 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P20-201ENST00000402555 TIMELESSQ9UNS1 1208 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms