RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 NME9Q86XW9 330 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 ST18O60284 1047 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 FCHSD2O94868 740 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 GNAI1P63096 354 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 ZSCAN23Q3MJ62 389 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 ZSCAN30Q86W11 494 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 RBSNQ9H1K0 784 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 CHMP4BQ9H444 224 aaKnown RBP11.28□□□□□ -0.6
HPS4-203ENST00000402105 PPIP5K1Q6PFW1 1433 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 RNF17Q9BXT8 1623 aaKnown RBP11.28□□□□□ -0.6
HPS4-203ENST00000402105 RTEL1-TNFRSF6BF6WH68 1400 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 ALDH1L2Q3SY69 923 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 MCM10Q7L590 875 aa11.28□□□□□ -0.6
HPS4-203ENST00000402105 NFE2L2Q16236 605 aa11.27□□□□□ -0.6
HPS4-203ENST00000402105 PLEKHM2Q8IWE5 1019 aa11.27□□□□□ -0.6
HPS4-203ENST00000402105 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.6
HPS4-203ENST00000402105 POLKQ9UBT6 870 aa11.27□□□□□ -0.6
HPS4-203ENST00000402105 MYOM1P52179 1685 aa11.27□□□□□ -0.61
HPS4-203ENST00000402105 INTS3Q68E01 1043 aaKnown RBP11.27□□□□□ -0.61
HPS4-203ENST00000402105 F6X3S4 739 aa11.27□□□□□ -0.61
HPS4-203ENST00000402105 FBXO31Q5XUX0 539 aaPredicted RBP11.27□□□□□ -0.61
HPS4-203ENST00000402105 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
HPS4-203ENST00000402105 SDSP20132 328 aa11.26□□□□□ -0.61
HPS4-203ENST00000402105 NUCB2P80303 420 aa11.26□□□□□ -0.61
HPS4-203ENST00000402105 RABEP1Q15276 862 aa11.26□□□□□ -0.61
HPS4-203ENST00000402105 KLHL40Q2TBA0 621 aa11.26□□□□□ -0.61
HPS4-203ENST00000402105 ABCC11Q96J66 1382 aa11.26□□□□□ -0.61
HPS4-203ENST00000402105 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
HPS4-203ENST00000402105 EXOC6BQ9Y2D4 811 aa11.26□□□□□ -0.61
HPS4-203ENST00000402105 PTMSP20962 102 aa11.25□□□□□ -0.61
HPS4-203ENST00000402105 ANO2Q9NQ90 1003 aa11.25□□□□□ -0.61
HPS4-203ENST00000402105 ABCA6Q8N139 1617 aa11.25□□□□□ -0.61
HPS4-203ENST00000402105 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
HPS4-203ENST00000402105 DDIT3P35638 169 aa11.25□□□□□ -0.61
HPS4-203ENST00000402105 UPF3BQ9BZI7 483 aaKnown RBP11.25□□□□□ -0.61
HPS4-203ENST00000402105 ISY1Q9ULR0 285 aaKnown RBP11.25□□□□□ -0.61
HPS4-203ENST00000402105 CEP152O94986 1710 aa11.25□□□□□ -0.61
HPS4-203ENST00000402105 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.25□□□□□ -0.61
HPS4-203ENST00000402105 MEIS3Q99687 375 aa11.25□□□□□ -0.61
HPS4-203ENST00000402105 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
HPS4-203ENST00000402105 ABCC1P33527 1531 aa11.24□□□□□ -0.61
HPS4-203ENST00000402105 MAP4K4O95819 1239 aaPredicted RBP11.24□□□□□ -0.61
HPS4-203ENST00000402105 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
HPS4-203ENST00000402105 TTC22Q5TAA0 569 aa11.24□□□□□ -0.61
HPS4-203ENST00000402105 SULT6B1Q6IMI4 303 aa11.24□□□□□ -0.61
HPS4-203ENST00000402105 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
HPS4-203ENST00000402105 ZNF830Q96NB3 372 aaPredicted RBP11.23□□□□□ -0.61
HPS4-203ENST00000402105 USP26Q9BXU7 913 aa11.23□□□□□ -0.61
HPS4-203ENST00000402105 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
HPS4-203ENST00000402105 IL16Q14005 1332 aa11.23□□□□□ -0.61
HPS4-203ENST00000402105 ZNF428Q96B54 188 aa11.23□□□□□ -0.61
HPS4-203ENST00000402105 UQCRHLA0A096LP55 91 aa11.23□□□□□ -0.61
HPS4-203ENST00000402105 UQCRHP07919 91 aa11.23□□□□□ -0.61
HPS4-203ENST00000402105 LMBRD1Q9NUN5 540 aa11.23□□□□□ -0.61
HPS4-203ENST00000402105 SPHKAPQ2M3C7 1700 aa11.23□□□□□ -0.61
HPS4-203ENST00000402105 MAP3K4Q9Y6R4 1608 aa11.23□□□□□ -0.61
HPS4-203ENST00000402105 TPM2P07951 284 aa11.22□□□□□ -0.61
HPS4-203ENST00000402105 ATP7AQ04656 1500 aa11.22□□□□□ -0.61
HPS4-203ENST00000402105 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.22□□□□□ -0.61
HPS4-203ENST00000402105 TXNDC2Q86VQ3 553 aa11.22□□□□□ -0.61
HPS4-203ENST00000402105 GPT2Q8TD30 523 aa11.22□□□□□ -0.61
HPS4-203ENST00000402105 COG3Q96JB2 828 aa11.22□□□□□ -0.61
HPS4-203ENST00000402105 SBNO2Q9Y2G9 1366 aa11.22□□□□□ -0.61
HPS4-203ENST00000402105 NPATQ14207 1427 aa11.22□□□□□ -0.61
HPS4-203ENST00000402105 PRDM10Q9NQV6 1147 aa11.22□□□□□ -0.61
HPS4-203ENST00000402105 CHMP3Q9Y3E7 222 aa11.22□□□□□ -0.61
HPS4-203ENST00000402105 REC8O95072 547 aa11.21□□□□□ -0.61
HPS4-203ENST00000402105 ZFYVE16Q7Z3T8 1539 aa11.21□□□□□ -0.61
HPS4-203ENST00000402105 FAM177BA6PVY3 158 aa11.21□□□□□ -0.62
HPS4-203ENST00000402105 TMEM63CQ9P1W3 806 aa11.21□□□□□ -0.62
HPS4-203ENST00000402105 ZMYM3Q14202 1370 aa11.21□□□□□ -0.62
HPS4-203ENST00000402105 IFT57Q9NWB7 429 aa11.21□□□□□ -0.62
HPS4-203ENST00000402105 TSC1Q92574 1164 aa11.2□□□□□ -0.62
HPS4-203ENST00000402105 CFAP44Q96MT7 982 aa11.2□□□□□ -0.62
HPS4-203ENST00000402105 DCTPP1Q9H773 170 aa11.2□□□□□ -0.62
HPS4-203ENST00000402105 RPGRIP1LQ68CZ1 1315 aa11.2□□□□□ -0.62
HPS4-203ENST00000402105 NSD2O96028 1365 aa11.2□□□□□ -0.62
HPS4-203ENST00000402105 ERC2O15083 957 aa11.2□□□□□ -0.62
HPS4-203ENST00000402105 JARID2Q92833 1246 aaPredicted RBP11.2□□□□□ -0.62
HPS4-203ENST00000402105 IL1RAPL2Q9NP60 686 aa11.2□□□□□ -0.62
HPS4-203ENST00000402105 AK9Q5TCS8 1911 aa11.19□□□□□ -0.62
HPS4-203ENST00000402105 MYOM2P54296 1465 aa11.19□□□□□ -0.62
HPS4-203ENST00000402105 OFD1O75665 1012 aa11.19□□□□□ -0.62
HPS4-203ENST00000402105 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
HPS4-203ENST00000402105 TMX3Q96JJ7 454 aa11.19□□□□□ -0.62
HPS4-203ENST00000402105 LMOD3Q0VAK6 560 aa11.18□□□□□ -0.62
HPS4-203ENST00000402105 CEP85Q6P2H3 762 aa11.18□□□□□ -0.62
HPS4-203ENST00000402105 C17orf53Q8N3J3 647 aaPredicted RBP11.18□□□□□ -0.62
HPS4-203ENST00000402105 PPP1R9BQ96SB3 815 aa11.18□□□□□ -0.62
HPS4-203ENST00000402105 PDCL3Q9H2J4 239 aa11.18□□□□□ -0.62
HPS4-203ENST00000402105 FOXO3O43524 673 aa11.18□□□□□ -0.62
HPS4-203ENST00000402105 G2E3Q7L622 706 aa11.18□□□□□ -0.62
HPS4-203ENST00000402105 RTF1Q92541 710 aaKnown RBP11.18□□□□□ -0.62
HPS4-203ENST00000402105 ARHGAP45Q92619 1136 aa11.18□□□□□ -0.62
HPS4-203ENST00000402105 LTV1Q96GA3 475 aaPredicted RBP11.18□□□□□ -0.62
HPS4-203ENST00000402105 SHPRHQ149N8 1683 aa11.18□□□□□ -0.62
HPS4-203ENST00000402105 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.17□□□□□ -0.62
HPS4-203ENST00000402105 FKBP5Q13451 457 aaPredicted RBP11.17□□□□□ -0.62
HPS4-203ENST00000402105 HMMRO75330 724 aa11.17□□□□□ -0.62
HPS4-203ENST00000402105 MCCP23508 829 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms