RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 GPR37L1O60883 481 aa7.34□□□□□ -1.23
RPA3-203ENST00000401447 ADH1CP00326 375 aa7.34□□□□□ -1.23
RPA3-203ENST00000401447 DZIP3Q86Y13 1208 aaKnown RBP7.34□□□□□ -1.23
RPA3-203ENST00000401447 COG6Q9Y2V7 657 aa7.34□□□□□ -1.23
RPA3-203ENST00000401447 C11orf95C9JLR9 678 aaPredicted RBP7.33□□□□□ -1.24
RPA3-203ENST00000401447 J3QL48 77 aa7.33□□□□□ -1.24
RPA3-203ENST00000401447 FSHRP23945 695 aa7.33□□□□□ -1.24
RPA3-203ENST00000401447 CDK15Q96Q40 435 aa7.33□□□□□ -1.24
RPA3-203ENST00000401447 OCSTAMPQ9BR26 566 aa7.33□□□□□ -1.24
RPA3-203ENST00000401447 PCDHB9Q9Y5E1 797 aa7.33□□□□□ -1.24
RPA3-203ENST00000401447 ABCC9O60706 1549 aa7.32□□□□□ -1.24
RPA3-203ENST00000401447 NFX1Q12986 1120 aaKnown RBP7.32□□□□□ -1.24
RPA3-203ENST00000401447 WASHC4Q2M389 1173 aa7.32□□□□□ -1.24
RPA3-203ENST00000401447 NR5A1Q13285 461 aa7.31□□□□□ -1.24
RPA3-203ENST00000401447 NNTQ13423 1086 aa7.31□□□□□ -1.24
RPA3-203ENST00000401447 ATP13A2Q9NQ11 1180 aa7.31□□□□□ -1.24
RPA3-203ENST00000401447 GTF3C3Q9Y5Q9 886 aa7.31□□□□□ -1.24
RPA3-203ENST00000401447 MCCD1P59942 119 aaPredicted RBP7.3□□□□□ -1.24
RPA3-203ENST00000401447 EIF4G2P78344 907 aaKnown RBP eCLIP7.3□□□□□ -1.24
RPA3-203ENST00000401447 IRF5Q13568 498 aa7.3□□□□□ -1.24
RPA3-203ENST00000401447 HPS1Q92902 700 aa7.3□□□□□ -1.24
RPA3-203ENST00000401447 POM121Q96HA1 1249 aa7.3□□□□□ -1.24
RPA3-203ENST00000401447 WFS1O76024 890 aa7.29□□□□□ -1.24
RPA3-203ENST00000401447 VAC14Q08AM6 782 aa7.29□□□□□ -1.24
RPA3-203ENST00000401447 KCTD15Q96SI1 283 aaPredicted RBP7.29□□□□□ -1.24
RPA3-203ENST00000401447 CCDC116Q8IYX3 515 aa7.28□□□□□ -1.24
RPA3-203ENST00000401447 TRIM47Q96LD4 638 aa7.28□□□□□ -1.24
RPA3-203ENST00000401447 WIPF1O43516 503 aa7.27□□□□□ -1.25
RPA3-203ENST00000401447 SNRPBP14678 240 aaKnown RBP7.27□□□□□ -1.25
RPA3-203ENST00000401447 SOX11P35716 441 aa7.27□□□□□ -1.25
RPA3-203ENST00000401447 GRM5P41594 1212 aa7.27□□□□□ -1.25
RPA3-203ENST00000401447 DHX9Q08211 1270 aaKnown RBP7.27□□□□□ -1.25
RPA3-203ENST00000401447 LCE2CQ5TA81 110 aa7.27□□□□□ -1.25
RPA3-203ENST00000401447 PROSER2Q86WR7 435 aaPredicted RBP7.27□□□□□ -1.25
RPA3-203ENST00000401447 CLUAP1Q96AJ1 413 aa7.27□□□□□ -1.25
RPA3-203ENST00000401447 NR3C2P08235 984 aa7.26□□□□□ -1.25
RPA3-203ENST00000401447 WDR4P57081 412 aaKnown RBP7.26□□□□□ -1.25
RPA3-203ENST00000401447 RAB15P59190 212 aa7.26□□□□□ -1.25
RPA3-203ENST00000401447 INTS6LQ5JSJ4 861 aaKnown RBP7.26□□□□□ -1.25
RPA3-203ENST00000401447 SEPT12Q8IYM1 358 aa7.26□□□□□ -1.25
RPA3-203ENST00000401447 TRIM52Q96A61 297 aa7.26□□□□□ -1.25
RPA3-203ENST00000401447 EMILIN1Q9Y6C2 1016 aa7.26□□□□□ -1.25
RPA3-203ENST00000401447 RNF20Q5VTR2 975 aa7.25□□□□□ -1.25
RPA3-203ENST00000401447 SENP2Q9HC62 589 aa7.25□□□□□ -1.25
RPA3-203ENST00000401447 PGPEP1Q9NXJ5 209 aa7.25□□□□□ -1.25
RPA3-203ENST00000401447 CAPN5O15484 640 aaPredicted RBP7.24□□□□□ -1.25
RPA3-203ENST00000401447 SEMA3FQ13275 785 aa7.24□□□□□ -1.25
RPA3-203ENST00000401447 PPP1R26Q5T8A7 1209 aaPredicted RBP7.24□□□□□ -1.25
RPA3-203ENST00000401447 A6NJR5 290 aa7.23□□□□□ -1.25
RPA3-203ENST00000401447 ESPNB1AK53 854 aa7.23□□□□□ -1.25
RPA3-203ENST00000401447 ZIC2O95409 532 aaPredicted RBP7.23□□□□□ -1.25
RPA3-203ENST00000401447 TIMP2P16035 220 aa7.23□□□□□ -1.25
RPA3-203ENST00000401447 CCDC125Q86Z20 511 aa7.23□□□□□ -1.25
RPA3-203ENST00000401447 TERTO14746 1132 aaKnown RBP7.22□□□□□ -1.25
RPA3-203ENST00000401447 GIGYF1O75420 1035 aaPredicted RBP7.22□□□□□ -1.25
RPA3-203ENST00000401447 SLFNL1Q499Z3 407 aa7.22□□□□□ -1.25
RPA3-203ENST00000401447 KIFC2Q96AC6 838 aa7.22□□□□□ -1.25
RPA3-203ENST00000401447 ITPKCQ96DU7 683 aa7.22□□□□□ -1.25
RPA3-203ENST00000401447 ZFAND3Q9H8U3 227 aa7.21□□□□□ -1.26
RPA3-203ENST00000401447 ERVH48-1M5A8F1 160 aa7.2□□□□□ -1.26
RPA3-203ENST00000401447 RNF135Q8IUD6 432 aa7.2□□□□□ -1.26
RPA3-203ENST00000401447 CEP126Q9P2H0 1117 aa7.2□□□□□ -1.26
RPA3-203ENST00000401447 UPP2O95045 317 aa7.19□□□□□ -1.26
RPA3-203ENST00000401447 ZNF784Q8NCA9 323 aaPredicted RBP7.19□□□□□ -1.26
RPA3-203ENST00000401447 KLF16Q9BXK1 252 aaPredicted RBP7.19□□□□□ -1.26
RPA3-203ENST00000401447 ESF1Q9H501 851 aaKnown RBP7.19□□□□□ -1.26
RPA3-203ENST00000401447 STK17AQ9UEE5 414 aa7.19□□□□□ -1.26
RPA3-203ENST00000401447 PCDHB11Q9Y5F2 797 aa7.19□□□□□ -1.26
RPA3-203ENST00000401447 POM121CA8CG34 1229 aa7.18□□□□□ -1.26
RPA3-203ENST00000401447 BMP1P13497 986 aa7.18□□□□□ -1.26
RPA3-203ENST00000401447 INSM1Q01101 510 aaPredicted RBP7.18□□□□□ -1.26
RPA3-203ENST00000401447 SCARF1Q14162 830 aa7.18□□□□□ -1.26
RPA3-203ENST00000401447 TRIM46Q7Z4K8 759 aa7.18□□□□□ -1.26
RPA3-203ENST00000401447 C14orf37Q86TY3 774 aa7.18□□□□□ -1.26
RPA3-203ENST00000401447 FNBP4Q8N3X1 1017 aaPredicted RBP7.18□□□□□ -1.26
RPA3-203ENST00000401447 MEIOBQ8N635 442 aa7.18□□□□□ -1.26
RPA3-203ENST00000401447 CYLDQ9NQC7 956 aa7.18□□□□□ -1.26
RPA3-203ENST00000401447 TMPRSS4Q9NRS4 437 aa7.18□□□□□ -1.26
RPA3-203ENST00000401447 DOLKQ9UPQ8 538 aa7.18□□□□□ -1.26
RPA3-203ENST00000401447 MRPL14Q6P1L8 145 aaKnown RBP7.16□□□□□ -1.26
RPA3-203ENST00000401447 ERICH6Q7L0X2 663 aa7.16□□□□□ -1.26
RPA3-203ENST00000401447 GLMNQ92990 594 aa7.16□□□□□ -1.26
RPA3-203ENST00000401447 ALG2Q9H553 416 aa7.16□□□□□ -1.26
RPA3-203ENST00000401447 TRAK2O60296 914 aa7.15□□□□□ -1.26
RPA3-203ENST00000401447 MYCP01106 439 aaPredicted RBP7.15□□□□□ -1.26
RPA3-203ENST00000401447 CBLBQ13191 982 aa7.15□□□□□ -1.26
RPA3-203ENST00000401447 HDGFL1Q5TGJ6 251 aa7.15□□□□□ -1.26
RPA3-203ENST00000401447 CC2D2BQ6DHV5 1058 aa7.15□□□□□ -1.26
RPA3-203ENST00000401447 LINC00528Q8N1L1 170 aa7.15□□□□□ -1.26
RPA3-203ENST00000401447 TSEN34Q9BSV6 310 aaKnown RBP7.15□□□□□ -1.26
RPA3-203ENST00000401447 ZMYND15Q9H091 742 aa7.15□□□□□ -1.26
RPA3-203ENST00000401447 NXF1Q9UBU9 619 aaKnown RBP7.15□□□□□ -1.26
RPA3-203ENST00000401447 ADH1AP07327 375 aa7.14□□□□□ -1.27
RPA3-203ENST00000401447 BMP2P12643 396 aa7.14□□□□□ -1.27
RPA3-203ENST00000401447 ERVK-9P63128 1117 aa7.14□□□□□ -1.27
RPA3-203ENST00000401447 MAP7D1Q3KQU3 841 aa7.14□□□□□ -1.27
RPA3-203ENST00000401447 OXLD1Q5BKU9 147 aa7.14□□□□□ -1.27
RPA3-203ENST00000401447 Q6ZVU0 165 aa7.14□□□□□ -1.27
RPA3-203ENST00000401447 PLPP7Q8NBV4 271 aa7.14□□□□□ -1.27
RPA3-203ENST00000401447 CALR3Q96L12 384 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms