RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 SCAPERQ9BY12 1400 aa9.86□□□□□ -0.83
CHD8-201ENST00000399982 KRT85P78386 507 aa9.86□□□□□ -0.83
CHD8-201ENST00000399982 TMEM87AQ8NBN3 555 aa9.86□□□□□ -0.83
CHD8-201ENST00000399982 PRPF40AO75400 957 aaKnown RBP9.86□□□□□ -0.83
CHD8-201ENST00000399982 PPFIBP1Q86W92 1011 aa9.86□□□□□ -0.83
CHD8-201ENST00000399982 SMC1AQ14683 1233 aaKnown RBP9.86□□□□□ -0.83
CHD8-201ENST00000399982 RNF214Q8ND24 703 aa9.86□□□□□ -0.83
CHD8-201ENST00000399982 PTPN14Q15678 1187 aa9.86□□□□□ -0.83
CHD8-201ENST00000399982 FEZ1Q99689 392 aa9.86□□□□□ -0.83
CHD8-201ENST00000399982 C9orf78Q9NZ63 289 aaPredicted RBP9.86□□□□□ -0.83
CHD8-201ENST00000399982 BBXQ8WY36 941 aaPredicted RBP9.85□□□□□ -0.83
CHD8-201ENST00000399982 NGDNQ8NEJ9 315 aaKnown RBP9.85□□□□□ -0.83
CHD8-201ENST00000399982 GSDMDP57764 484 aa9.85□□□□□ -0.83
CHD8-201ENST00000399982 CCDC148Q8NFR7 591 aa9.85□□□□□ -0.83
CHD8-201ENST00000399982 TUBBP07437 444 aa9.85□□□□□ -0.83
CHD8-201ENST00000399982 ATP2B2Q01814 1243 aa9.85□□□□□ -0.83
CHD8-201ENST00000399982 TANGO6Q9C0B7 1094 aa9.85□□□□□ -0.83
CHD8-201ENST00000399982 RUNDC1Q96C34 613 aa9.85□□□□□ -0.83
CHD8-201ENST00000399982 MPHOSPH10O00566 681 aaKnown RBP9.85□□□□□ -0.83
CHD8-201ENST00000399982 V9GYY5 206 aaPredicted RBP9.84□□□□□ -0.83
CHD8-201ENST00000399982 IFIT2P09913 472 aaKnown RBP9.84□□□□□ -0.83
CHD8-201ENST00000399982 ZSCAN31Q96LW9 406 aaPredicted RBP9.84□□□□□ -0.83
CHD8-201ENST00000399982 CCDC113Q9H0I3 377 aa9.84□□□□□ -0.83
CHD8-201ENST00000399982 TNMDQ9H2S6 317 aa9.84□□□□□ -0.83
CHD8-201ENST00000399982 NECTIN2Q92692 538 aa9.84□□□□□ -0.83
CHD8-201ENST00000399982 LRRFIP2Q9Y608 721 aaKnown RBP9.84□□□□□ -0.83
CHD8-201ENST00000399982 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
CHD8-201ENST00000399982 TRIM21P19474 475 aaKnown RBP9.83□□□□□ -0.84
CHD8-201ENST00000399982 UBE4AQ14139 1066 aa9.83□□□□□ -0.84
CHD8-201ENST00000399982 DNAAF4Q8WXU2 420 aa9.83□□□□□ -0.84
CHD8-201ENST00000399982 TMCO5BA8MYB1 307 aa9.83□□□□□ -0.84
CHD8-201ENST00000399982 PLIN1O60240 522 aa9.83□□□□□ -0.84
CHD8-201ENST00000399982 NUTM2FA1L443 756 aa9.83□□□□□ -0.84
CHD8-201ENST00000399982 EIF2S2P20042 333 aaKnown RBP9.83□□□□□ -0.84
CHD8-201ENST00000399982 GNAI1P63096 354 aa9.83□□□□□ -0.84
CHD8-201ENST00000399982 GIGYF2Q6Y7W6 1299 aaKnown RBP9.83□□□□□ -0.84
CHD8-201ENST00000399982 ZNF428Q96B54 188 aa9.83□□□□□ -0.84
CHD8-201ENST00000399982 CCDC94Q9BW85 323 aaPredicted RBP9.83□□□□□ -0.84
CHD8-201ENST00000399982 FAM177A1Q8N128 213 aaPredicted RBP9.83□□□□□ -0.84
CHD8-201ENST00000399982 CHMP4BP1P59074 171 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 STIM1Q13586 685 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 IMMTQ16891 758 aaKnown RBP9.82□□□□□ -0.84
CHD8-201ENST00000399982 RALYLQ86SE5 291 aaKnown RBP9.82□□□□□ -0.84
CHD8-201ENST00000399982 SRRTQ9BXP5 876 aaKnown RBP9.82□□□□□ -0.84
CHD8-201ENST00000399982 ERICH4A6NGS2 130 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 CTAGE5O15320 804 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 FMNL2Q96PY5 1086 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 CLGNO14967 610 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 TTC5Q8N0Z6 440 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 CNTROBQ8N137 903 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 PAIP2Q9BPZ3 127 aaKnown RBP9.82□□□□□ -0.84
CHD8-201ENST00000399982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHD8-201ENST00000399982 ATP2B1P20020 1258 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 A6NNZ2 444 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 TUBB8Q3ZCM7 444 aa9.82□□□□□ -0.84
CHD8-201ENST00000399982 CCDC171Q6TFL3 1326 aa9.81□□□□□ -0.84
CHD8-201ENST00000399982 SFPQP23246 707 aaKnown RBP eCLIP9.81□□□□□ -0.84
CHD8-201ENST00000399982 GPATCH11Q8N954 259 aa9.81□□□□□ -0.84
CHD8-201ENST00000399982 SRCIN1Q9C0H9 1055 aa9.81□□□□□ -0.84
CHD8-201ENST00000399982 ANKRD18BA2A2Z9 1011 aa9.81□□□□□ -0.84
CHD8-201ENST00000399982 SERPINC1P01008 464 aa9.81□□□□□ -0.84
CHD8-201ENST00000399982 MRPS9P82933 396 aaKnown RBP9.81□□□□□ -0.84
CHD8-201ENST00000399982 WASHC4Q2M389 1173 aa9.81□□□□□ -0.84
CHD8-201ENST00000399982 CCDC183Q5T5S1 534 aa9.81□□□□□ -0.84
CHD8-201ENST00000399982 NUP62CLQ9H1M0 184 aa9.81□□□□□ -0.84
CHD8-201ENST00000399982 PPP6R1Q9UPN7 881 aa9.8□□□□□ -0.84
CHD8-201ENST00000399982 SOGA1O94964 1423 aa9.8□□□□□ -0.84
CHD8-201ENST00000399982 MAP3K11Q16584 847 aa9.8□□□□□ -0.84
CHD8-201ENST00000399982 SPECC1LQ69YQ0 1117 aa9.8□□□□□ -0.84
CHD8-201ENST00000399982 SH3BGRP55822 239 aaPredicted RBP9.8□□□□□ -0.84
CHD8-201ENST00000399982 SPC24Q8NBT2 197 aa9.8□□□□□ -0.84
CHD8-201ENST00000399982 PANK3Q9H999 370 aa9.8□□□□□ -0.84
CHD8-201ENST00000399982 CUX1P39880 1505 aa9.8□□□□□ -0.84
CHD8-201ENST00000399982 MNAT1P51948 309 aa9.8□□□□□ -0.84
CHD8-201ENST00000399982 PABPN1LA6NDY0 278 aaKnown RBP9.8□□□□□ -0.84
CHD8-201ENST00000399982 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
CHD8-201ENST00000399982 MYCNP04198 464 aaPredicted RBP9.79□□□□□ -0.84
CHD8-201ENST00000399982 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
CHD8-201ENST00000399982 DAAM2Q86T65 1068 aa9.79□□□□□ -0.84
CHD8-201ENST00000399982 KIF5CO60282 957 aa9.79□□□□□ -0.84
CHD8-201ENST00000399982 DDX58O95786 925 aaKnown RBP9.79□□□□□ -0.84
CHD8-201ENST00000399982 GNAI3P08754 354 aa9.79□□□□□ -0.84
CHD8-201ENST00000399982 DRC1Q96MC2 740 aa9.79□□□□□ -0.84
CHD8-201ENST00000399982 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
CHD8-201ENST00000399982 EPB41L2O43491 1005 aaKnown RBP9.78□□□□□ -0.84
CHD8-201ENST00000399982 NEK4P51957 841 aa9.78□□□□□ -0.84
CHD8-201ENST00000399982 ARHGAP29Q52LW3 1261 aa9.78□□□□□ -0.84
CHD8-201ENST00000399982 CARMIL2Q6F5E8 1435 aa9.78□□□□□ -0.84
CHD8-201ENST00000399982 WDR78Q5VTH9 848 aa9.78□□□□□ -0.84
CHD8-201ENST00000399982 SMARCC1Q92922 1105 aaPredicted RBP9.78□□□□□ -0.84
CHD8-201ENST00000399982 GABPB1Q06547 395 aaPredicted RBP9.78□□□□□ -0.84
CHD8-201ENST00000399982 AEBP2Q6ZN18 517 aaPredicted RBP9.78□□□□□ -0.84
CHD8-201ENST00000399982 ERC1Q8IUD2 1116 aa9.78□□□□□ -0.84
CHD8-201ENST00000399982 SCAND2PQ9GZW5 306 aaPredicted RBP9.78□□□□□ -0.84
CHD8-201ENST00000399982 FERP16591 822 aa9.78□□□□□ -0.84
CHD8-201ENST00000399982 G3BP1Q13283 466 aaKnown RBP eCLIP9.78□□□□□ -0.841e-6■■■□□ 17.8
CHD8-201ENST00000399982 KANK4Q5T7N3 995 aaPredicted RBP9.78□□□□□ -0.84
CHD8-201ENST00000399982 APBB1IPQ7Z5R6 666 aaPredicted RBP9.78□□□□□ -0.84
CHD8-201ENST00000399982 UPF3BQ9BZI7 483 aaKnown RBP9.78□□□□□ -0.84
CHD8-201ENST00000399982 CPSF2Q9P2I0 782 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms