RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 SSH2Q76I76 1423 aa12.35□□□□□ -0.43
LINC00243-201ENST00000399196 SOX12O15370 315 aa12.34□□□□□ -0.43
LINC00243-201ENST00000399196 OVOS2A0A0J9YW53 1432 aa12.34□□□□□ -0.43
LINC00243-201ENST00000399196 OVOS2Q6IE36 1432 aa12.34□□□□□ -0.43
LINC00243-201ENST00000399196 E9PSI1 815 aa12.34□□□□□ -0.43
LINC00243-201ENST00000399196 NLRP6P59044 892 aa12.34□□□□□ -0.43
LINC00243-201ENST00000399196 PSME1Q06323 249 aa12.34□□□□□ -0.43
LINC00243-201ENST00000399196 DDX17Q92841 729 aaKnown RBP12.34□□□□□ -0.43
LINC00243-201ENST00000399196 KIF1AQ12756 1690 aa12.33□□□□□ -0.44
LINC00243-201ENST00000399196 PNNQ9H307 717 aaKnown RBP12.33□□□□□ -0.44
LINC00243-201ENST00000399196 MAPK8IP3Q9UPT6 1336 aa12.33□□□□□ -0.44
LINC00243-201ENST00000399196 CDK12Q9NYV4 1490 aaPredicted RBP12.33□□□□□ -0.44
LINC00243-201ENST00000399196 ABTB2Q8N961 1025 aa12.33□□□□□ -0.44
LINC00243-201ENST00000399196 SLAIN2Q9P270 581 aa12.33□□□□□ -0.44
LINC00243-201ENST00000399196 XPCQ01831 940 aaPredicted RBP12.32□□□□□ -0.44
LINC00243-201ENST00000399196 BRINP3Q76B58 766 aa12.32□□□□□ -0.44
LINC00243-201ENST00000399196 FOXO3O43524 673 aa12.31□□□□□ -0.44
LINC00243-201ENST00000399196 NEFMP07197 916 aa12.31□□□□□ -0.44
LINC00243-201ENST00000399196 CCDC27Q2M243 656 aa12.31□□□□□ -0.44
LINC00243-201ENST00000399196 NUTM2GQ5VZR2 741 aa12.31□□□□□ -0.44
LINC00243-201ENST00000399196 TRIM35Q9UPQ4 493 aa12.31□□□□□ -0.44
LINC00243-201ENST00000399196 TRPM3Q9HCF6 1732 aaPredicted RBP12.31□□□□□ -0.44
LINC00243-201ENST00000399196 BCAR3O75815 825 aa12.31□□□□□ -0.44
LINC00243-201ENST00000399196 IL13P35225 146 aa12.31□□□□□ -0.44
LINC00243-201ENST00000399196 TMPOP42166 694 aaKnown RBP12.31□□□□□ -0.44
LINC00243-201ENST00000399196 CRBNQ96SW2 442 aa12.31□□□□□ -0.44
LINC00243-201ENST00000399196 USP31Q70CQ4 1352 aa12.31□□□□□ -0.44
LINC00243-201ENST00000399196 PIK3C2AO00443 1686 aa12.31□□□□□ -0.44
LINC00243-201ENST00000399196 PEAK1Q9H792 1746 aa12.3□□□□□ -0.44
LINC00243-201ENST00000399196 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
LINC00243-201ENST00000399196 CCDC136Q96JN2 1154 aa12.3□□□□□ -0.44
LINC00243-201ENST00000399196 RSPH6AQ9H0K4 717 aa12.3□□□□□ -0.44
LINC00243-201ENST00000399196 ROBO1Q9Y6N7 1651 aa12.3□□□□□ -0.44
LINC00243-201ENST00000399196 FCHSD2O94868 740 aa12.3□□□□□ -0.44
LINC00243-201ENST00000399196 WDR63Q8IWG1 891 aa12.3□□□□□ -0.44
LINC00243-201ENST00000399196 MARF1Q9Y4F3 1742 aaKnown RBP12.29□□□□□ -0.44
LINC00243-201ENST00000399196 PXDNQ92626 1479 aa12.29□□□□□ -0.44
LINC00243-201ENST00000399196 NHSL1Q5SYE7 1610 aa12.28□□□□□ -0.44
LINC00243-201ENST00000399196 HMOX1P09601 288 aa12.28□□□□□ -0.44
LINC00243-201ENST00000399196 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
LINC00243-201ENST00000399196 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
LINC00243-201ENST00000399196 AMPHP49418 695 aa12.28□□□□□ -0.44
LINC00243-201ENST00000399196 CERKQ8TCT0 537 aa12.28□□□□□ -0.44
LINC00243-201ENST00000399196 MAP3K19Q56UN5 1328 aa12.27□□□□□ -0.44
LINC00243-201ENST00000399196 LMOD2Q6P5Q4 547 aa12.27□□□□□ -0.45
LINC00243-201ENST00000399196 ALS2Q96Q42 1657 aa12.26□□□□□ -0.45
LINC00243-201ENST00000399196 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
LINC00243-201ENST00000399196 HSP90AB2PQ58FF8 381 aa12.26□□□□□ -0.45
LINC00243-201ENST00000399196 KRT28Q7Z3Y7 464 aa12.26□□□□□ -0.45
LINC00243-201ENST00000399196 DLG5Q8TDM6 1919 aa12.26□□□□□ -0.45
LINC00243-201ENST00000399196 SBNO1A3KN83 1393 aa12.26□□□□□ -0.45
LINC00243-201ENST00000399196 FLT4P35916 1363 aa12.26□□□□□ -0.45
LINC00243-201ENST00000399196 RIPK4P57078 832 aa12.25□□□□□ -0.45
LINC00243-201ENST00000399196 TSR2Q969E8 191 aaKnown RBP12.25□□□□□ -0.45
LINC00243-201ENST00000399196 USP54Q70EL1 1684 aa12.25□□□□□ -0.45
LINC00243-201ENST00000399196 NPHP3Q7Z494 1330 aa12.25□□□□□ -0.45
LINC00243-201ENST00000399196 FANCIQ9NVI1 1328 aa12.24□□□□□ -0.45
LINC00243-201ENST00000399196 UBAP1LF5GYI3 381 aa12.23□□□□□ -0.45
LINC00243-201ENST00000399196 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
LINC00243-201ENST00000399196 RARSP54136 660 aaKnown RBP12.23□□□□□ -0.45
LINC00243-201ENST00000399196 PIP4K2BP78356 416 aa12.23□□□□□ -0.45
LINC00243-201ENST00000399196 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
LINC00243-201ENST00000399196 SOS2Q07890 1332 aaPredicted RBP12.23□□□□□ -0.45
LINC00243-201ENST00000399196 AHDC1Q5TGY3 1603 aaPredicted RBP12.23□□□□□ -0.45
LINC00243-201ENST00000399196 RGPD1P0DJD0 1748 aa12.23□□□□□ -0.45
LINC00243-201ENST00000399196 KCNH5Q8NCM2 988 aa12.23□□□□□ -0.45
LINC00243-201ENST00000399196 TNNQ9UQP3 1299 aa12.23□□□□□ -0.45
LINC00243-201ENST00000399196 RBM19Q9Y4C8 960 aaKnown RBP12.23□□□□□ -0.45
LINC00243-201ENST00000399196 ZBTB7CA1YPR0 619 aa12.22□□□□□ -0.45
LINC00243-201ENST00000399196 SULT6B1Q6IMI4 303 aa12.22□□□□□ -0.45
LINC00243-201ENST00000399196 BCL2L13Q9BXK5 485 aa12.22□□□□□ -0.45
LINC00243-201ENST00000399196 TNS3Q68CZ2 1445 aa12.22□□□□□ -0.45
LINC00243-201ENST00000399196 KIF24Q5T7B8 1368 aa12.22□□□□□ -0.45
LINC00243-201ENST00000399196 TOM1O60784 492 aa12.22□□□□□ -0.45
LINC00243-201ENST00000399196 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
LINC00243-201ENST00000399196 MYH16Q9H6N6 1097 aa12.22□□□□□ -0.45
LINC00243-201ENST00000399196 MED1Q15648 1581 aaPredicted RBP12.21□□□□□ -0.45
LINC00243-201ENST00000399196 HOXC9P31274 260 aa12.21□□□□□ -0.45
LINC00243-201ENST00000399196 NFE2L2Q16236 605 aa12.21□□□□□ -0.45
LINC00243-201ENST00000399196 CRYBG1Q9Y4K1 1723 aa12.21□□□□□ -0.46
LINC00243-201ENST00000399196 SPATA31A3Q5VYP0 1347 aa12.2□□□□□ -0.46
LINC00243-201ENST00000399196 EXOSC9Q06265 439 aaKnown RBP12.2□□□□□ -0.46
LINC00243-201ENST00000399196 SKAP1Q86WV1 359 aa12.2□□□□□ -0.46
LINC00243-201ENST00000399196 COL16A1Q07092 1604 aaPredicted RBP12.2□□□□□ -0.46
LINC00243-201ENST00000399196 PHLPP1O60346 1717 aa12.19□□□□□ -0.46
LINC00243-201ENST00000399196 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
LINC00243-201ENST00000399196 IL16Q14005 1332 aa12.19□□□□□ -0.46
LINC00243-201ENST00000399196 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.19□□□□□ -0.46
LINC00243-201ENST00000399196 PANK1Q8TE04 598 aa12.19□□□□□ -0.46
LINC00243-201ENST00000399196 LTV1Q96GA3 475 aaPredicted RBP12.19□□□□□ -0.46
LINC00243-201ENST00000399196 ARHGEF10O15013 1369 aa12.19□□□□□ -0.46
LINC00243-201ENST00000399196 SLIT3O75094 1523 aa12.19□□□□□ -0.46
LINC00243-201ENST00000399196 NFAT5O94916 1531 aa12.19□□□□□ -0.46
LINC00243-201ENST00000399196 GCP02774 474 aa12.18□□□□□ -0.46
LINC00243-201ENST00000399196 RLBP1P12271 317 aa12.18□□□□□ -0.46
LINC00243-201ENST00000399196 PHRF1Q9P1Y6 1649 aaKnown RBP12.18□□□□□ -0.46
LINC00243-201ENST00000399196 FAM83GA6ND36 823 aa12.18□□□□□ -0.46
LINC00243-201ENST00000399196 LMOD3Q0VAK6 560 aa12.18□□□□□ -0.46
LINC00243-201ENST00000399196 USP19O94966 1318 aa12.17□□□□□ -0.46
LINC00243-201ENST00000399196 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 942.3 ms