RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 TRIM35Q9UPQ4 493 aa30.35■■■□□ 2.45
CDH23-206ENST00000398842 FLT4P35916 1363 aa30.35■■■□□ 2.45
CDH23-206ENST00000398842 ATF3P18847 181 aa30.34■■■□□ 2.45
CDH23-206ENST00000398842 FOXO3O43524 673 aa30.33■■■□□ 2.45
CDH23-206ENST00000398842 KIF24Q5T7B8 1368 aa30.33■■■□□ 2.45
CDH23-206ENST00000398842 PPP4R2Q9NY27 417 aa30.32■■■□□ 2.44
CDH23-206ENST00000398842 RIPK4P57078 832 aa30.31■■■□□ 2.44
CDH23-206ENST00000398842 NEFMP07197 916 aa30.3■■■□□ 2.44
CDH23-206ENST00000398842 PHACTR3Q96KR7 559 aa30.3■■■□□ 2.44
CDH23-206ENST00000398842 NFAT5O94916 1531 aa30.29■■■□□ 2.44
CDH23-206ENST00000398842 CADPS2Q86UW7 1296 aa30.28■■■□□ 2.44
CDH23-206ENST00000398842 AMPHP49418 695 aa30.28■■■□□ 2.44
CDH23-206ENST00000398842 MSH6P52701 1360 aa30.27■■■□□ 2.44
CDH23-206ENST00000398842 LTN1O94822 1766 aa30.27■■■□□ 2.44
CDH23-206ENST00000398842 NFE2L2Q16236 605 aa30.27■■■□□ 2.44
CDH23-206ENST00000398842 XPCQ01831 940 aaPredicted RBP30.25■■■□□ 2.43
CDH23-206ENST00000398842 KRT28Q7Z3Y7 464 aa30.25■■■□□ 2.43
CDH23-206ENST00000398842 IL16Q14005 1332 aa30.25■■■□□ 2.43
CDH23-206ENST00000398842 DLG5Q8TDM6 1919 aa30.24■■■□□ 2.43
CDH23-206ENST00000398842 MYH16Q9H6N6 1097 aa30.24■■■□□ 2.43
CDH23-206ENST00000398842 ARHGEF10O15013 1369 aa30.24■■■□□ 2.43
CDH23-206ENST00000398842 HOXC9P31274 260 aa30.23■■■□□ 2.43
CDH23-206ENST00000398842 SULT6B1Q6IMI4 303 aa30.23■■■□□ 2.43
CDH23-206ENST00000398842 SLIT3O75094 1523 aa30.23■■■□□ 2.43
CDH23-206ENST00000398842 AEBP1Q8IUX7 1158 aa30.23■■■□□ 2.43
CDH23-206ENST00000398842 RTL1A6NKG5 1358 aa30.23■■■□□ 2.43
CDH23-206ENST00000398842 ALS2Q96Q42 1657 aa30.23■■■□□ 2.43
CDH23-206ENST00000398842 PHRF1Q9P1Y6 1649 aaKnown RBP30.22■■■□□ 2.43
CDH23-206ENST00000398842 KCNH5Q8NCM2 988 aa30.2■■■□□ 2.43
CDH23-206ENST00000398842 LTBP4Q8N2S1 1624 aa30.2■■■□□ 2.43
CDH23-206ENST00000398842 PLIN1O60240 522 aa30.2■■■□□ 2.42
CDH23-206ENST00000398842 KDRP35968 1356 aa30.17■■■□□ 2.42
CDH23-206ENST00000398842 USP19O94966 1318 aa30.17■■■□□ 2.42
CDH23-206ENST00000398842 IGSF1Q8N6C5 1336 aa30.17■■■□□ 2.42
CDH23-206ENST00000398842 FANCIQ9NVI1 1328 aa30.16■■■□□ 2.42
CDH23-206ENST00000398842 EYA1Q99502 592 aa30.15■■■□□ 2.42
CDH23-206ENST00000398842 IP6K1Q92551 441 aa30.14■■■□□ 2.42
CDH23-206ENST00000398842 GCP02774 474 aa30.13■■■□□ 2.41
CDH23-206ENST00000398842 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.13■■■□□ 2.41
CDH23-206ENST00000398842 EXOC6Q8TAG9 804 aa30.13■■■□□ 2.41
CDH23-206ENST00000398842 NPHP3Q7Z494 1330 aa30.12■■■□□ 2.41
CDH23-206ENST00000398842 LMOD3Q0VAK6 560 aa30.12■■■□□ 2.41
CDH23-206ENST00000398842 PELP1Q8IZL8 1130 aaKnown RBP30.12■■■□□ 2.41
CDH23-206ENST00000398842 TSR2Q969E8 191 aaKnown RBP30.12■■■□□ 2.41
CDH23-206ENST00000398842 BCAR3O75815 825 aa30.11■■■□□ 2.41
CDH23-206ENST00000398842 B4GALNT3Q6L9W6 998 aa30.11■■■□□ 2.41
CDH23-206ENST00000398842 PXDNQ92626 1479 aa30.1■■■□□ 2.41
CDH23-206ENST00000398842 LMOD2Q6P5Q4 547 aa30.1■■■□□ 2.41
CDH23-206ENST00000398842 DDX17Q92841 729 aaKnown RBP30.1■■■□□ 2.41
CDH23-206ENST00000398842 CALD1Q05682 793 aaKnown RBP30.09■■■□□ 2.41
CDH23-206ENST00000398842 MED1Q15648 1581 aaPredicted RBP30.09■■■□□ 2.41
CDH23-206ENST00000398842 CT47B1P0C2W7 299 aaPredicted RBP30.08■■■□□ 2.41
CDH23-206ENST00000398842 RARSP54136 660 aaKnown RBP30.08■■■□□ 2.41
CDH23-206ENST00000398842 ARHGEF25Q86VW2 580 aa30.08■■■□□ 2.41
CDH23-206ENST00000398842 C20orf194Q5TEA3 1177 aa30.08■■■□□ 2.41
CDH23-206ENST00000398842 THUMPD2Q9BTF0 503 aaKnown RBP30.06■■■□□ 2.4
CDH23-206ENST00000398842 EXOSC9Q06265 439 aaKnown RBP30.05■■■□□ 2.4
CDH23-206ENST00000398842 BRINP3Q76B58 766 aa30.05■■■□□ 2.4
CDH23-206ENST00000398842 SLAIN2Q9P270 581 aa30.05■■■□□ 2.4
CDH23-206ENST00000398842 CRBNQ96SW2 442 aa30.05■■■□□ 2.4
CDH23-206ENST00000398842 TNS3Q68CZ2 1445 aa30.05■■■□□ 2.4
CDH23-206ENST00000398842 ZNF853P0CG23 659 aa30.03■■■□□ 2.4
CDH23-206ENST00000398842 LTV1Q96GA3 475 aaPredicted RBP30.03■■■□□ 2.4
CDH23-206ENST00000398842 IFT57Q9NWB7 429 aa30.03■■■□□ 2.4
CDH23-206ENST00000398842 FAM83GA6ND36 823 aa30.02■■■□□ 2.4
CDH23-206ENST00000398842 GNAI1P63096 354 aa30.01■■■□□ 2.39
CDH23-206ENST00000398842 CRYBG1Q9Y4K1 1723 aa30.01■■■□□ 2.39
CDH23-206ENST00000398842 CCDC136Q96JN2 1154 aa30■■■□□ 2.39
CDH23-206ENST00000398842 RGPD2P0DJD1 1756 aa30■■■□□ 2.39
CDH23-206ENST00000398842 SPATA31A3Q5VYP0 1347 aa30■■■□□ 2.39
CDH23-206ENST00000398842 MTHFSDQ2M296 383 aaKnown RBP30■■■□□ 2.39
CDH23-206ENST00000398842 ZBTB7CA1YPR0 619 aa29.98■■■□□ 2.39
CDH23-206ENST00000398842 PLEKHG5O94827 1062 aa29.98■■■□□ 2.39
CDH23-206ENST00000398842 DCTN1Q14203 1278 aa29.98■■■□□ 2.39
CDH23-206ENST00000398842 CFAP44Q96MT7 982 aa29.98■■■□□ 2.39
CDH23-206ENST00000398842 LAS1LQ9Y4W2 734 aaKnown RBP29.97■■■□□ 2.39
CDH23-206ENST00000398842 GAS2L2Q8NHY3 880 aa29.96■■■□□ 2.39
CDH23-206ENST00000398842 PDE3AQ14432 1141 aa29.95■■■□□ 2.39
CDH23-206ENST00000398842 NBPF6Q5VWK0 638 aa29.95■■■□□ 2.39
CDH23-206ENST00000398842 NBPF4Q96M43 638 aa29.95■■■□□ 2.39
CDH23-206ENST00000398842 RGPD5Q99666 1765 aa29.95■■■□□ 2.39
CDH23-206ENST00000398842 MBIPQ9NS73 344 aa29.95■■■□□ 2.38
CDH23-206ENST00000398842 CAMTA1Q9Y6Y1 1673 aa29.94■■■□□ 2.38
CDH23-206ENST00000398842 NCAPD2Q15021 1401 aa29.94■■■□□ 2.38
CDH23-206ENST00000398842 SOS2Q07890 1332 aaPredicted RBP29.93■■■□□ 2.38
CDH23-206ENST00000398842 USHBP1Q8N6Y0 703 aa29.92■■■□□ 2.38
CDH23-206ENST00000398842 COL18A1P39060 1754 aa29.92■■■□□ 2.38
CDH23-206ENST00000398842 MCM10Q7L590 875 aa29.92■■■□□ 2.38
CDH23-206ENST00000398842 BCL2L13Q9BXK5 485 aa29.92■■■□□ 2.38
CDH23-206ENST00000398842 AXIN2Q9Y2T1 843 aa29.91■■■□□ 2.38
CDH23-206ENST00000398842 CRB1P82279 1406 aa29.9■■■□□ 2.38
CDH23-206ENST00000398842 ZC3H6P61129 1189 aaKnown RBP29.9■■■□□ 2.38
CDH23-206ENST00000398842 ANKRD24Q8TF21 1146 aa29.9■■■□□ 2.38
CDH23-206ENST00000398842 NHSL1Q5SYE7 1610 aa29.89■■■□□ 2.38
CDH23-206ENST00000398842 HTATSF1O43719 755 aaKnown RBP29.89■■■□□ 2.38
CDH23-206ENST00000398842 CANXP27824 592 aaKnown RBP29.89■■■□□ 2.38
CDH23-206ENST00000398842 FRAT1Q92837 279 aaPredicted RBP29.89■■■□□ 2.38
CDH23-206ENST00000398842 LRRC59Q96AG4 307 aaKnown RBP29.89■■■□□ 2.38
CDH23-206ENST00000398842 SSH1Q8WYL5 1049 aa29.88■■■□□ 2.37
CDH23-206ENST00000398842 ZNF428Q96B54 188 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms