RNA–Protein interactions for RNA: ENST00000398238.8

NSF-201, Transcript of N-ethylmaleimide sensitive factor, vesicle fusing ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSF, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSF-201ENST00000398238 FOXO3O43524 673 aa17.43■□□□□ 0.38
NSF-201ENST00000398238 MCM10Q7L590 875 aa17.43■□□□□ 0.38
NSF-201ENST00000398238 DLC1Q96QB1 1528 aa17.42■□□□□ 0.38
NSF-201ENST00000398238 MRPL50Q8N5N7 158 aaKnown RBP17.42■□□□□ 0.38
NSF-201ENST00000398238 RBM33Q96EV2 1170 aaKnown RBP17.41■□□□□ 0.38
NSF-201ENST00000398238 ZBTB7BO15156 539 aaPredicted RBP17.41■□□□□ 0.38
NSF-201ENST00000398238 ANTXR1Q9H6X2 564 aa17.41■□□□□ 0.38
NSF-201ENST00000398238 CCDC61Q9Y6R9 512 aa17.41■□□□□ 0.38
NSF-201ENST00000398238 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.41■□□□□ 0.38
NSF-201ENST00000398238 EIF4A2Q14240 407 aaKnown RBP17.4■□□□□ 0.38
NSF-201ENST00000398238 SULT6B1Q6IMI4 303 aa17.39■□□□□ 0.38
NSF-201ENST00000398238 SMC5Q8IY18 1101 aa17.39■□□□□ 0.38
NSF-201ENST00000398238 DDX19BQ9UMR2 479 aa17.39■□□□□ 0.38
NSF-201ENST00000398238 ATP7BP35670 1465 aa17.39■□□□□ 0.37
NSF-201ENST00000398238 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
NSF-201ENST00000398238 HDAC1Q13547 482 aaPredicted RBP17.39■□□□□ 0.37
NSF-201ENST00000398238 RIMS1Q86UR5 1692 aaKnown RBP17.38■□□□□ 0.37
NSF-201ENST00000398238 ACEP12821 1306 aa17.38■□□□□ 0.37
NSF-201ENST00000398238 IL16Q14005 1332 aa17.38■□□□□ 0.37
NSF-201ENST00000398238 CDC42BPGQ6DT37 1551 aa17.38■□□□□ 0.37
NSF-201ENST00000398238 NUTM2GQ5VZR2 741 aa17.38■□□□□ 0.37
NSF-201ENST00000398238 COG3Q96JB2 828 aa17.38■□□□□ 0.37
NSF-201ENST00000398238 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
NSF-201ENST00000398238 GSE1Q14687 1217 aa17.38■□□□□ 0.37
NSF-201ENST00000398238 PTPRUQ92729 1446 aa17.37■□□□□ 0.37
NSF-201ENST00000398238 ADAMTS13Q76LX8 1427 aa17.37■□□□□ 0.37
NSF-201ENST00000398238 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
NSF-201ENST00000398238 TWISTNBQ3B726 338 aaPredicted RBP17.36■□□□□ 0.37
NSF-201ENST00000398238 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
NSF-201ENST00000398238 KNDC1Q76NI1 1749 aa17.36■□□□□ 0.37
NSF-201ENST00000398238 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
NSF-201ENST00000398238 CD2BP2O95400 341 aaKnown RBP17.35■□□□□ 0.37
NSF-201ENST00000398238 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
NSF-201ENST00000398238 ANKRD45Q5TZF3 282 aa17.35■□□□□ 0.37
NSF-201ENST00000398238 NUCB1Q02818 461 aa17.35■□□□□ 0.37
NSF-201ENST00000398238 OTUD7AQ8TE49 926 aaPredicted RBP17.35■□□□□ 0.37
NSF-201ENST00000398238 RBM42Q9BTD8 480 aaKnown RBP17.34■□□□□ 0.37
NSF-201ENST00000398238 C3P01024 1663 aa17.34■□□□□ 0.37
NSF-201ENST00000398238 ARXQ96QS3 562 aa17.34■□□□□ 0.37
NSF-201ENST00000398238 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
NSF-201ENST00000398238 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
NSF-201ENST00000398238 ESF1Q9H501 851 aaKnown RBP17.34■□□□□ 0.37
NSF-201ENST00000398238 TMEM2Q9UHN6 1383 aa17.33■□□□□ 0.37
NSF-201ENST00000398238 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.37
NSF-201ENST00000398238 MON2Q7Z3U7 1717 aa17.33■□□□□ 0.36
NSF-201ENST00000398238 TNRQ92752 1358 aa17.33■□□□□ 0.36
NSF-201ENST00000398238 CHD1LQ86WJ1 897 aa17.32■□□□□ 0.36
NSF-201ENST00000398238 RGPD8O14715 1765 aaPredicted RBP17.32■□□□□ 0.36
NSF-201ENST00000398238 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
NSF-201ENST00000398238 APBB1O00213 710 aa17.32■□□□□ 0.36
NSF-201ENST00000398238 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
NSF-201ENST00000398238 CDK12Q9NYV4 1490 aaPredicted RBP17.32■□□□□ 0.36
NSF-201ENST00000398238 UBR1Q8IWV7 1749 aa17.31■□□□□ 0.36
NSF-201ENST00000398238 CFAP44Q96MT7 982 aa17.31■□□□□ 0.36
NSF-201ENST00000398238 ADAMTSL3P82987 1691 aa17.31■□□□□ 0.36
NSF-201ENST00000398238 IFT57Q9NWB7 429 aa17.3■□□□□ 0.36
NSF-201ENST00000398238 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
NSF-201ENST00000398238 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
NSF-201ENST00000398238 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
NSF-201ENST00000398238 G2E3Q7L622 706 aa17.3■□□□□ 0.36
NSF-201ENST00000398238 KIF2CQ99661 725 aa17.3■□□□□ 0.36
NSF-201ENST00000398238 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
NSF-201ENST00000398238 SMARCA5O60264 1052 aaPredicted RBP17.29■□□□□ 0.36
NSF-201ENST00000398238 ABCC4O15439 1325 aa17.28■□□□□ 0.36
NSF-201ENST00000398238 NECTIN2Q92692 538 aa17.28■□□□□ 0.36
NSF-201ENST00000398238 F6X3S4 739 aa17.28■□□□□ 0.36
NSF-201ENST00000398238 GNAI1P63096 354 aa17.28■□□□□ 0.36
NSF-201ENST00000398238 AATKQ6ZMQ8 1374 aa17.27■□□□□ 0.36
NSF-201ENST00000398238 RGS12O14924 1447 aa17.27■□□□□ 0.36
NSF-201ENST00000398238 IPO8O15397 1037 aaKnown RBP17.27■□□□□ 0.36
NSF-201ENST00000398238 GSPT1P15170 499 aaKnown RBP17.27■□□□□ 0.36
NSF-201ENST00000398238 AMOTL2Q9Y2J4 779 aa17.27■□□□□ 0.36
NSF-201ENST00000398238 FER1L4A9Z1Z3 1794 aa17.27■□□□□ 0.35
NSF-201ENST00000398238 TECPR2O15040 1411 aa17.27■□□□□ 0.35
NSF-201ENST00000398238 PTCH1Q13635 1447 aa17.27■□□□□ 0.35
NSF-201ENST00000398238 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
NSF-201ENST00000398238 AAMPQ13685 434 aa17.26■□□□□ 0.35
NSF-201ENST00000398238 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
NSF-201ENST00000398238 ITSN1Q15811 1721 aa17.26■□□□□ 0.35
NSF-201ENST00000398238 GZF1Q9H116 711 aaPredicted RBP17.25■□□□□ 0.35
NSF-201ENST00000398238 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.25■□□□□ 0.35
NSF-201ENST00000398238 MEIS3Q99687 375 aa17.25■□□□□ 0.35
NSF-201ENST00000398238 OVOS2A0A0J9YW53 1432 aa17.25■□□□□ 0.35
NSF-201ENST00000398238 OVOS2Q6IE36 1432 aa17.25■□□□□ 0.35
NSF-201ENST00000398238 NRKQ7Z2Y5 1582 aa17.24■□□□□ 0.35
NSF-201ENST00000398238 PNNQ9H307 717 aaKnown RBP17.24■□□□□ 0.35
NSF-201ENST00000398238 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
NSF-201ENST00000398238 TBC1D9Q6ZT07 1266 aa17.24■□□□□ 0.35
NSF-201ENST00000398238 USP6P35125 1406 aa17.24■□□□□ 0.35
NSF-201ENST00000398238 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
NSF-201ENST00000398238 USHBP1Q8N6Y0 703 aa17.23■□□□□ 0.35
NSF-201ENST00000398238 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
NSF-201ENST00000398238 PIK3R4Q99570 1358 aa17.23■□□□□ 0.35
NSF-201ENST00000398238 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
NSF-201ENST00000398238 UPF2Q9HAU5 1272 aaKnown RBP17.23■□□□□ 0.35
NSF-201ENST00000398238 CHL1O00533 1208 aa17.22■□□□□ 0.35
NSF-201ENST00000398238 LTV1Q96GA3 475 aaPredicted RBP17.22■□□□□ 0.35
NSF-201ENST00000398238 EYA1Q99502 592 aa17.21■□□□□ 0.35
NSF-201ENST00000398238 MSH6P52701 1360 aa17.21■□□□□ 0.35
NSF-201ENST00000398238 BECN1Q14457 450 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms