RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ZBTB7CA1YPR0 619 aa25.49■■□□□ 1.67
PDLIM2-204ENST00000397760 ARHGEF25Q86VW2 580 aa25.49■■□□□ 1.67
PDLIM2-204ENST00000397760 MED1Q15648 1581 aaPredicted RBP25.48■■□□□ 1.67
PDLIM2-204ENST00000397760 ROBO1Q9Y6N7 1651 aa25.48■■□□□ 1.67
PDLIM2-204ENST00000397760 APAF1O14727 1248 aa25.48■■□□□ 1.67
PDLIM2-204ENST00000397760 CABLES1Q8TDN4 633 aa25.48■■□□□ 1.67
PDLIM2-204ENST00000397760 IP6K1Q92551 441 aa25.48■■□□□ 1.67
PDLIM2-204ENST00000397760 RTL1A6NKG5 1358 aa25.48■■□□□ 1.67
PDLIM2-204ENST00000397760 FCHSD2O94868 740 aa25.47■■□□□ 1.67
PDLIM2-204ENST00000397760 PNNQ9H307 717 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-204ENST00000397760 UBAP1LF5GYI3 381 aa25.46■■□□□ 1.67
PDLIM2-204ENST00000397760 PIP4K2BP78356 416 aa25.46■■□□□ 1.67
PDLIM2-204ENST00000397760 HMOX1P09601 288 aa25.44■■□□□ 1.66
PDLIM2-204ENST00000397760 ZC3H6P61129 1189 aaKnown RBP25.44■■□□□ 1.66
PDLIM2-204ENST00000397760 PLEKHF1Q96S99 279 aa25.44■■□□□ 1.66
PDLIM2-204ENST00000397760 CERKQ8TCT0 537 aa25.44■■□□□ 1.66
PDLIM2-204ENST00000397760 IQSEC2Q5JU85 1478 aa25.43■■□□□ 1.66
PDLIM2-204ENST00000397760 LRRC59Q96AG4 307 aaKnown RBP25.43■■□□□ 1.66
PDLIM2-204ENST00000397760 RSPH6AQ9H0K4 717 aa25.43■■□□□ 1.66
PDLIM2-204ENST00000397760 TCP11L2Q8N4U5 519 aa25.42■■□□□ 1.66
PDLIM2-204ENST00000397760 AHDC1Q5TGY3 1603 aaPredicted RBP25.42■■□□□ 1.66
PDLIM2-204ENST00000397760 LTV1Q96GA3 475 aaPredicted RBP25.41■■□□□ 1.66
PDLIM2-204ENST00000397760 LTN1O94822 1766 aa25.4■■□□□ 1.66
PDLIM2-204ENST00000397760 PRKAR2BP31323 418 aa25.4■■□□□ 1.66
PDLIM2-204ENST00000397760 NGEFQ8N5V2 710 aa25.4■■□□□ 1.66
PDLIM2-204ENST00000397760 MAPK8IP3Q9UPT6 1336 aa25.4■■□□□ 1.66
PDLIM2-204ENST00000397760 SULT6B1Q6IMI4 303 aa25.39■■□□□ 1.65
PDLIM2-204ENST00000397760 PHRF1Q9P1Y6 1649 aaKnown RBP25.39■■□□□ 1.65
PDLIM2-204ENST00000397760 EYA1Q99502 592 aa25.38■■□□□ 1.65
PDLIM2-204ENST00000397760 PPP4R2Q9NY27 417 aa25.38■■□□□ 1.65
PDLIM2-204ENST00000397760 NEFMP07197 916 aa25.37■■□□□ 1.65
PDLIM2-204ENST00000397760 HAP1P54257 671 aaPredicted RBP25.37■■□□□ 1.65
PDLIM2-204ENST00000397760 RRP7AQ9Y3A4 280 aaKnown RBP25.37■■□□□ 1.65
PDLIM2-204ENST00000397760 AEBP1Q8IUX7 1158 aa25.37■■□□□ 1.65
PDLIM2-204ENST00000397760 NEUROD2Q15784 382 aa25.36■■□□□ 1.65
PDLIM2-204ENST00000397760 AXIN2Q9Y2T1 843 aa25.36■■□□□ 1.65
PDLIM2-204ENST00000397760 IGSF1Q8N6C5 1336 aa25.36■■□□□ 1.65
PDLIM2-204ENST00000397760 CPDO75976 1380 aa25.36■■□□□ 1.65
PDLIM2-204ENST00000397760 CRYBG1Q9Y4K1 1723 aa25.35■■□□□ 1.65
PDLIM2-204ENST00000397760 PDE3BQ13370 1112 aa25.35■■□□□ 1.65
PDLIM2-204ENST00000397760 KIAA0232Q92628 1395 aa25.34■■□□□ 1.65
PDLIM2-204ENST00000397760 TMPOP42166 694 aaKnown RBP25.33■■□□□ 1.65
PDLIM2-204ENST00000397760 PHACTR3Q96KR7 559 aa25.33■■□□□ 1.65
PDLIM2-204ENST00000397760 ZNF521Q96K83 1311 aa25.33■■□□□ 1.65
PDLIM2-204ENST00000397760 RGPD1P0DJD0 1748 aa25.33■■□□□ 1.65
PDLIM2-204ENST00000397760 CHRNA2Q15822 529 aa25.33■■□□□ 1.64
PDLIM2-204ENST00000397760 NCBP3Q53F19 620 aaKnown RBP25.33■■□□□ 1.64
PDLIM2-204ENST00000397760 ANKRD24Q8TF21 1146 aa25.33■■□□□ 1.64
PDLIM2-204ENST00000397760 RBM19Q9Y4C8 960 aaKnown RBP25.33■■□□□ 1.64
PDLIM2-204ENST00000397760 PRDM11Q9NQV5 511 aa25.3■■□□□ 1.64
PDLIM2-204ENST00000397760 CCDC27Q2M243 656 aa25.3■■□□□ 1.64
PDLIM2-204ENST00000397760 WWC1Q8IX03 1113 aa25.3■■□□□ 1.64
PDLIM2-204ENST00000397760 KDRP35968 1356 aa25.29■■□□□ 1.64
PDLIM2-204ENST00000397760 NBPF6Q5VWK0 638 aa25.29■■□□□ 1.64
PDLIM2-204ENST00000397760 CDCA7LQ96GN5 454 aa25.29■■□□□ 1.64
PDLIM2-204ENST00000397760 NBPF4Q96M43 638 aa25.29■■□□□ 1.64
PDLIM2-204ENST00000397760 PHLPP1O60346 1717 aa25.29■■□□□ 1.64
PDLIM2-204ENST00000397760 GOLGA2Q08379 1002 aa25.28■■□□□ 1.64
PDLIM2-204ENST00000397760 RIPK4P57078 832 aa25.28■■□□□ 1.64
PDLIM2-204ENST00000397760 NFE2L2Q16236 605 aa25.28■■□□□ 1.64
PDLIM2-204ENST00000397760 PHF23Q9BUL5 403 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-204ENST00000397760 ERBB3P21860 1342 aa25.27■■□□□ 1.64
PDLIM2-204ENST00000397760 COL16A1Q07092 1604 aaPredicted RBP25.27■■□□□ 1.64
PDLIM2-204ENST00000397760 USHBP1Q8N6Y0 703 aa25.27■■□□□ 1.64
PDLIM2-204ENST00000397760 ABCC6O95255 1503 aa25.26■■□□□ 1.63
PDLIM2-204ENST00000397760 RNF123Q5XPI4 1314 aa25.25■■□□□ 1.63
PDLIM2-204ENST00000397760 COL18A1P39060 1754 aa25.24■■□□□ 1.63
PDLIM2-204ENST00000397760 ABCA3Q99758 1704 aa25.24■■□□□ 1.63
PDLIM2-204ENST00000397760 TRIM35Q9UPQ4 493 aa25.23■■□□□ 1.63
PDLIM2-204ENST00000397760 WDR63Q8IWG1 891 aa25.23■■□□□ 1.63
PDLIM2-204ENST00000397760 CSB-PGBD3P0DP91 1061 aa25.22■■□□□ 1.63
PDLIM2-204ENST00000397760 COL22A1Q8NFW1 1626 aaPredicted RBP25.22■■□□□ 1.63
PDLIM2-204ENST00000397760 FAM83GA6ND36 823 aa25.21■■□□□ 1.63
PDLIM2-204ENST00000397760 IRX6P78412 446 aaPredicted RBP25.21■■□□□ 1.63
PDLIM2-204ENST00000397760 SLFN5Q08AF3 891 aa25.21■■□□□ 1.63
PDLIM2-204ENST00000397760 ANP32EQ9BTT0 268 aa25.21■■□□□ 1.63
PDLIM2-204ENST00000397760 NLRP2Q9NX02 1062 aa25.2■■□□□ 1.62
PDLIM2-204ENST00000397760 SPINK5Q9NQ38 1064 aaPredicted RBP25.19■■□□□ 1.62
PDLIM2-204ENST00000397760 RGPD5Q99666 1765 aa25.19■■□□□ 1.62
PDLIM2-204ENST00000397760 E9PSI1 815 aa25.19■■□□□ 1.62
PDLIM2-204ENST00000397760 NCAPD2Q15021 1401 aa25.18■■□□□ 1.62
PDLIM2-204ENST00000397760 MTHFSDQ2M296 383 aaKnown RBP25.17■■□□□ 1.62
PDLIM2-204ENST00000397760 CAMTA1Q9Y6Y1 1673 aa25.17■■□□□ 1.62
PDLIM2-204ENST00000397760 LMOD3Q0VAK6 560 aa25.16■■□□□ 1.62
PDLIM2-204ENST00000397760 DUSP27Q5VZP5 1158 aa25.16■■□□□ 1.62
PDLIM2-204ENST00000397760 TRMT2AQ8IZ69 625 aaKnown RBP25.16■■□□□ 1.62
PDLIM2-204ENST00000397760 GAS2L2Q8NHY3 880 aa25.16■■□□□ 1.62
PDLIM2-204ENST00000397760 LMO7Q8WWI1 1683 aa25.15■■□□□ 1.62
PDLIM2-204ENST00000397760 FANCIQ9NVI1 1328 aa25.14■■□□□ 1.62
PDLIM2-204ENST00000397760 RGPD2P0DJD1 1756 aa25.14■■□□□ 1.62
PDLIM2-204ENST00000397760 WDR17Q8IZU2 1322 aa25.14■■□□□ 1.61
PDLIM2-204ENST00000397760 NUTM2BA6NNL0 878 aaPredicted RBP25.13■■□□□ 1.61
PDLIM2-204ENST00000397760 NUTM2EB1AL46 878 aaPredicted RBP25.13■■□□□ 1.61
PDLIM2-204ENST00000397760 EVA1CP58658 441 aa25.13■■□□□ 1.61
PDLIM2-204ENST00000397760 NUTM2AQ8IVF1 878 aaPredicted RBP25.13■■□□□ 1.61
PDLIM2-204ENST00000397760 COL5A2P05997 1499 aaPredicted RBP25.13■■□□□ 1.61
PDLIM2-204ENST00000397760 STRN4Q9NRL3 753 aa25.12■■□□□ 1.61
PDLIM2-204ENST00000397760 JCADQ9P266 1359 aa25.12■■□□□ 1.61
PDLIM2-204ENST00000397760 IL16Q14005 1332 aa25.12■■□□□ 1.61
PDLIM2-204ENST00000397760 ADAMTS2O95450 1211 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms