RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 SETD1BQ9UPS6 1966 aaKnown RBP20.64■□□□□ 0.9
SNX6-202ENST00000396526 ALDH1L2Q3SY69 923 aa20.64■□□□□ 0.89
SNX6-202ENST00000396526 HAP1P54257 671 aaPredicted RBP20.64■□□□□ 0.89
SNX6-202ENST00000396526 NLRP6P59044 892 aa20.64■□□□□ 0.89
SNX6-202ENST00000396526 EIF4A2Q14240 407 aaKnown RBP20.64■□□□□ 0.89
SNX6-202ENST00000396526 SULT6B1Q6IMI4 303 aa20.64■□□□□ 0.89
SNX6-202ENST00000396526 USP31Q70CQ4 1352 aa20.64■□□□□ 0.89
SNX6-202ENST00000396526 C14orf37Q86TY3 774 aa20.63■□□□□ 0.89
SNX6-202ENST00000396526 SSH1Q8WYL5 1049 aa20.62■□□□□ 0.89
SNX6-202ENST00000396526 RWDD1Q9H446 243 aaPredicted RBP20.62■□□□□ 0.89
SNX6-202ENST00000396526 MVPQ14764 893 aaKnown RBP20.61■□□□□ 0.89
SNX6-202ENST00000396526 BACH2Q9BYV9 841 aa20.61■□□□□ 0.89
SNX6-202ENST00000396526 CHMP4BQ9H444 224 aaKnown RBP20.61■□□□□ 0.89
SNX6-202ENST00000396526 TOPAZ1Q8N9V7 1692 aa20.61■□□□□ 0.89
SNX6-202ENST00000396526 ATF7IPQ6VMQ6 1270 aa20.61■□□□□ 0.89
SNX6-202ENST00000396526 DDX19BQ9UMR2 479 aa20.61■□□□□ 0.89
SNX6-202ENST00000396526 PAK3O75914 559 aaPredicted RBP20.6■□□□□ 0.89
SNX6-202ENST00000396526 SSH2Q76I76 1423 aa20.6■□□□□ 0.89
SNX6-202ENST00000396526 MYT1Q01538 1121 aa20.6■□□□□ 0.89
SNX6-202ENST00000396526 HSP90AB2PQ58FF8 381 aa20.6■□□□□ 0.89
SNX6-202ENST00000396526 PHF8Q9UPP1 1060 aa20.6■□□□□ 0.89
SNX6-202ENST00000396526 FLT4P35916 1363 aa20.59■□□□□ 0.89
SNX6-202ENST00000396526 CFAP44Q96MT7 982 aa20.59■□□□□ 0.89
SNX6-202ENST00000396526 ABTB2Q8N961 1025 aa20.59■□□□□ 0.89
SNX6-202ENST00000396526 XRN1Q8IZH2 1706 aaKnown RBP20.58■□□□□ 0.89
SNX6-202ENST00000396526 SBNO1A3KN83 1393 aa20.58■□□□□ 0.88
SNX6-202ENST00000396526 MAP3K19Q56UN5 1328 aa20.58■□□□□ 0.88
SNX6-202ENST00000396526 RGS3P49796 1198 aa20.57■□□□□ 0.88
SNX6-202ENST00000396526 RLBP1P12271 317 aa20.57■□□□□ 0.88
SNX6-202ENST00000396526 NOB1Q9ULX3 412 aaKnown RBP20.57■□□□□ 0.88
SNX6-202ENST00000396526 ITPRIPQ8IWB1 547 aa20.56■□□□□ 0.88
SNX6-202ENST00000396526 THUMPD2Q9BTF0 503 aaKnown RBP20.55■□□□□ 0.88
SNX6-202ENST00000396526 ANP32EQ9BTT0 268 aa20.55■□□□□ 0.88
SNX6-202ENST00000396526 DNAJC5Q9H3Z4 198 aa20.55■□□□□ 0.88
SNX6-202ENST00000396526 TRIM27P14373 513 aa20.55■□□□□ 0.88
SNX6-202ENST00000396526 RTF1Q92541 710 aaKnown RBP20.55■□□□□ 0.88
SNX6-202ENST00000396526 NRKQ7Z2Y5 1582 aa20.55■□□□□ 0.88
SNX6-202ENST00000396526 PSME1Q06323 249 aa20.54■□□□□ 0.88
SNX6-202ENST00000396526 FAM161AQ3B820 660 aa20.54■□□□□ 0.88
SNX6-202ENST00000396526 KIF24Q5T7B8 1368 aa20.54■□□□□ 0.88
SNX6-202ENST00000396526 NPHP4O75161 1426 aaPredicted RBP20.54■□□□□ 0.88
SNX6-202ENST00000396526 AEBP1Q8IUX7 1158 aa20.54■□□□□ 0.88
SNX6-202ENST00000396526 IGHDP01880 384 aa20.53■□□□□ 0.88
SNX6-202ENST00000396526 ZNF853P0CG23 659 aa20.53■□□□□ 0.88
SNX6-202ENST00000396526 BRPF1P55201 1214 aaPredicted RBP20.53■□□□□ 0.88
SNX6-202ENST00000396526 NPM2Q86SE8 214 aaKnown RBP20.53■□□□□ 0.88
SNX6-202ENST00000396526 IPO9Q96P70 1041 aaKnown RBP20.53■□□□□ 0.88
SNX6-202ENST00000396526 MBIPQ9NS73 344 aa20.53■□□□□ 0.88
SNX6-202ENST00000396526 ARHGEF10O15013 1369 aa20.53■□□□□ 0.88
SNX6-202ENST00000396526 ADAMTSL3P82987 1691 aa20.53■□□□□ 0.88
SNX6-202ENST00000396526 TWISTNBQ3B726 338 aaPredicted RBP20.52■□□□□ 0.88
SNX6-202ENST00000396526 ESCO1Q5FWF5 840 aa20.52■□□□□ 0.88
SNX6-202ENST00000396526 ZBTB47Q9UFB7 747 aaPredicted RBP20.52■□□□□ 0.88
SNX6-202ENST00000396526 TNNQ9UQP3 1299 aa20.52■□□□□ 0.88
SNX6-202ENST00000396526 VAMP4O75379 141 aa20.51■□□□□ 0.87
SNX6-202ENST00000396526 GAS2L2Q8NHY3 880 aa20.51■□□□□ 0.87
SNX6-202ENST00000396526 ARHGAP45Q92619 1136 aa20.51■□□□□ 0.87
SNX6-202ENST00000396526 ZNF142P52746 1687 aaPredicted RBP20.51■□□□□ 0.87
SNX6-202ENST00000396526 NUTM2GQ5VZR2 741 aa20.49■□□□□ 0.87
SNX6-202ENST00000396526 PCDHB15Q9Y5E8 787 aa20.49■□□□□ 0.87
SNX6-202ENST00000396526 ELL2O00472 640 aaPredicted RBP20.49■□□□□ 0.87
SNX6-202ENST00000396526 MSH5O43196 834 aa20.49■□□□□ 0.87
SNX6-202ENST00000396526 ADGRL3Q9HAR2 1447 aa20.49■□□□□ 0.87
SNX6-202ENST00000396526 NOP58Q9Y2X3 529 aaKnown RBP20.49■□□□□ 0.87
SNX6-202ENST00000396526 FAM83GA6ND36 823 aa20.48■□□□□ 0.87
SNX6-202ENST00000396526 SKAP1Q86WV1 359 aa20.48■□□□□ 0.87
SNX6-202ENST00000396526 API5Q9BZZ5 524 aaKnown RBP20.48■□□□□ 0.87
SNX6-202ENST00000396526 PROSER2Q86WR7 435 aaPredicted RBP20.48■□□□□ 0.87
SNX6-202ENST00000396526 DCTN1Q14203 1278 aa20.47■□□□□ 0.87
SNX6-202ENST00000396526 KCNH5Q8NCM2 988 aa20.47■□□□□ 0.87
SNX6-202ENST00000396526 TMEM57Q8N5G2 664 aa20.47■□□□□ 0.87
SNX6-202ENST00000396526 DDRGK1Q96HY6 314 aa20.47■□□□□ 0.87
SNX6-202ENST00000396526 FMN2Q9NZ56 1722 aa20.46■□□□□ 0.87
SNX6-202ENST00000396526 RBM33Q96EV2 1170 aaKnown RBP20.46■□□□□ 0.87
SNX6-202ENST00000396526 EYA1Q99502 592 aa20.46■□□□□ 0.87
SNX6-202ENST00000396526 NALCNQ8IZF0 1738 aa20.46■□□□□ 0.87
SNX6-202ENST00000396526 CHD2O14647 1828 aaKnown RBP20.45■□□□□ 0.86
SNX6-202ENST00000396526 HOXC9P31274 260 aa20.45■□□□□ 0.86
SNX6-202ENST00000396526 MRPL50Q8N5N7 158 aaKnown RBP20.45■□□□□ 0.86
SNX6-202ENST00000396526 IGSF1Q8N6C5 1336 aa20.45■□□□□ 0.86
SNX6-202ENST00000396526 TSPYL6Q8N831 410 aa20.44■□□□□ 0.86
SNX6-202ENST00000396526 HTATSF1O43719 755 aaKnown RBP20.44■□□□□ 0.86
SNX6-202ENST00000396526 CHL1O00533 1208 aa20.43■□□□□ 0.86
SNX6-202ENST00000396526 HDAC1Q13547 482 aaPredicted RBP20.43■□□□□ 0.86
SNX6-202ENST00000396526 MCM10Q7L590 875 aa20.43■□□□□ 0.86
SNX6-202ENST00000396526 RGPD8O14715 1765 aaPredicted RBP20.43■□□□□ 0.86
SNX6-202ENST00000396526 C8orf58Q8NAV2 365 aa20.43■□□□□ 0.86
SNX6-202ENST00000396526 DAXXQ9UER7 740 aaPredicted RBP20.42■□□□□ 0.86
SNX6-202ENST00000396526 KDRP35968 1356 aa20.42■□□□□ 0.86
SNX6-202ENST00000396526 LTV1Q96GA3 475 aaPredicted RBP20.42■□□□□ 0.86
SNX6-202ENST00000396526 RTL1A6NKG5 1358 aa20.42■□□□□ 0.86
SNX6-202ENST00000396526 MTHFSDQ2M296 383 aaKnown RBP20.41■□□□□ 0.86
SNX6-202ENST00000396526 PDZRN3Q9UPQ7 1066 aa20.41■□□□□ 0.86
SNX6-202ENST00000396526 ZBTB40Q9NUA8 1239 aa20.41■□□□□ 0.86
SNX6-202ENST00000396526 KIAA0232Q92628 1395 aa20.4■□□□□ 0.86
SNX6-202ENST00000396526 IP6K1Q92551 441 aa20.39■□□□□ 0.86
SNX6-202ENST00000396526 C19orf44Q9H6X5 657 aa20.39■□□□□ 0.86
SNX6-202ENST00000396526 TSPYL4Q9UJ04 414 aa20.39■□□□□ 0.86
SNX6-202ENST00000396526 LMOD2Q6P5Q4 547 aa20.39■□□□□ 0.85
SNX6-202ENST00000396526 GNAT3A8MTJ3 354 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms