RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TTC21BQ7Z4L5 1316 aa25.09■■□□□ 1.61
EXOSC3-202ENST00000396521 NINLQ9Y2I6 1382 aa25.08■■□□□ 1.61
EXOSC3-202ENST00000396521 NUP188Q5SRE5 1749 aa25.08■■□□□ 1.61
EXOSC3-202ENST00000396521 CPSF1Q10570 1443 aaKnown RBP25.07■■□□□ 1.6
EXOSC3-202ENST00000396521 AXIN2Q9Y2T1 843 aa25.07■■□□□ 1.6
EXOSC3-202ENST00000396521 QRICH2Q9H0J4 1663 aa25.07■■□□□ 1.6
EXOSC3-202ENST00000396521 CSB-PGBD3P0DP91 1061 aa25.05■■□□□ 1.6
EXOSC3-202ENST00000396521 EXOC5O00471 708 aa25.04■■□□□ 1.6
EXOSC3-202ENST00000396521 YY1P25490 414 aa25.04■■□□□ 1.6
EXOSC3-202ENST00000396521 MARCH10Q8NA82 808 aaPredicted RBP25.04■■□□□ 1.6
EXOSC3-202ENST00000396521 ROCK2O75116 1388 aaKnown RBP25.04■■□□□ 1.6
EXOSC3-202ENST00000396521 PEAK1Q9H792 1746 aa25.03■■□□□ 1.6
EXOSC3-202ENST00000396521 RGPD3A6NKT7 1758 aaPredicted RBP25.03■■□□□ 1.6
EXOSC3-202ENST00000396521 RGPD4Q7Z3J3 1758 aa25.03■■□□□ 1.6
EXOSC3-202ENST00000396521 CCDC7Q96M83 1385 aa25.03■■□□□ 1.6
EXOSC3-202ENST00000396521 TRPM1Q7Z4N2 1603 aa25.01■■□□□ 1.59
EXOSC3-202ENST00000396521 LRRC37A3O60309 1634 aa25■■□□□ 1.59
EXOSC3-202ENST00000396521 PIK3C2AO00443 1686 aa25■■□□□ 1.59
EXOSC3-202ENST00000396521 COL18A1P39060 1754 aa24.99■■□□□ 1.59
EXOSC3-202ENST00000396521 KTN1Q86UP2 1357 aaKnown RBP24.99■■□□□ 1.59
EXOSC3-202ENST00000396521 ABCC6O95255 1503 aa24.98■■□□□ 1.59
EXOSC3-202ENST00000396521 PROM2Q8N271 834 aa24.98■■□□□ 1.59
EXOSC3-202ENST00000396521 SBNO2Q9Y2G9 1366 aa24.96■■□□□ 1.59
EXOSC3-202ENST00000396521 ANO8Q9HCE9 1232 aaPredicted RBP24.96■■□□□ 1.59
EXOSC3-202ENST00000396521 STK32BQ9NY57 414 aa24.96■■□□□ 1.59
EXOSC3-202ENST00000396521 SOX12O15370 315 aa24.95■■□□□ 1.58
EXOSC3-202ENST00000396521 TXNRD1Q16881 649 aa24.95■■□□□ 1.58
EXOSC3-202ENST00000396521 USP31Q70CQ4 1352 aa24.94■■□□□ 1.58
EXOSC3-202ENST00000396521 PTF1AQ7RTS3 328 aa24.93■■□□□ 1.58
EXOSC3-202ENST00000396521 SIN3AQ96ST3 1273 aa24.93■■□□□ 1.58
EXOSC3-202ENST00000396521 SBF2Q86WG5 1849 aa24.92■■□□□ 1.58
EXOSC3-202ENST00000396521 SLC15A2Q16348 729 aa24.92■■□□□ 1.58
EXOSC3-202ENST00000396521 NEUROD1Q13562 356 aa24.91■■□□□ 1.58
EXOSC3-202ENST00000396521 NFAT5O94916 1531 aa24.91■■□□□ 1.58
EXOSC3-202ENST00000396521 TNS2Q63HR2 1409 aa24.9■■□□□ 1.58
EXOSC3-202ENST00000396521 ERBB3P21860 1342 aa24.89■■□□□ 1.58
EXOSC3-202ENST00000396521 HDGFL2Q7Z4V5 671 aaPredicted RBP24.89■■□□□ 1.58
EXOSC3-202ENST00000396521 ZBTB7AO95365 584 aa24.88■■□□□ 1.57
EXOSC3-202ENST00000396521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.88■■□□□ 1.57
EXOSC3-202ENST00000396521 PUS7Q96PZ0 661 aaKnown RBP24.88■■□□□ 1.57
EXOSC3-202ENST00000396521 MTFR1LQ9H019 292 aa24.88■■□□□ 1.57
EXOSC3-202ENST00000396521 NLRP2Q9NX02 1062 aa24.88■■□□□ 1.57
EXOSC3-202ENST00000396521 AKAP12Q02952 1782 aa24.88■■□□□ 1.57
EXOSC3-202ENST00000396521 IL2RBP14784 551 aa24.87■■□□□ 1.57
EXOSC3-202ENST00000396521 PTGER2P43116 358 aa24.87■■□□□ 1.57
EXOSC3-202ENST00000396521 TERF2IPQ9NYB0 399 aa24.87■■□□□ 1.57
EXOSC3-202ENST00000396521 WNK3Q9BYP7 1800 aa24.85■■□□□ 1.57
EXOSC3-202ENST00000396521 CARD11Q9BXL7 1154 aa24.85■■□□□ 1.57
EXOSC3-202ENST00000396521 SLC24A1O60721 1099 aa24.84■■□□□ 1.57
EXOSC3-202ENST00000396521 PDGFDQ9GZP0 370 aaPredicted RBP24.84■■□□□ 1.57
EXOSC3-202ENST00000396521 CASZ1Q86V15 1759 aa24.84■■□□□ 1.57
EXOSC3-202ENST00000396521 TMC1Q8TDI8 760 aa24.83■■□□□ 1.57
EXOSC3-202ENST00000396521 ATF5Q9Y2D1 282 aaPredicted RBP24.83■■□□□ 1.57
EXOSC3-202ENST00000396521 EDC4Q6P2E9 1401 aaKnown RBP24.82■■□□□ 1.56
EXOSC3-202ENST00000396521 NME9Q86XW9 330 aa24.82■■□□□ 1.56
EXOSC3-202ENST00000396521 ANKRD24Q8TF21 1146 aa24.81■■□□□ 1.56
EXOSC3-202ENST00000396521 SYT17Q9BSW7 474 aa24.8■■□□□ 1.56
EXOSC3-202ENST00000396521 MON2Q7Z3U7 1717 aa24.78■■□□□ 1.56
EXOSC3-202ENST00000396521 RGPD5Q99666 1765 aa24.78■■□□□ 1.56
EXOSC3-202ENST00000396521 ACSBG1Q96GR2 724 aa24.78■■□□□ 1.56
EXOSC3-202ENST00000396521 SGIP1Q9BQI5 828 aa24.78■■□□□ 1.56
EXOSC3-202ENST00000396521 FHDC1Q9C0D6 1143 aaPredicted RBP24.78■■□□□ 1.56
EXOSC3-202ENST00000396521 SLC12A5Q9H2X9 1139 aa24.78■■□□□ 1.56
EXOSC3-202ENST00000396521 CD163L1Q9NR16 1453 aa24.77■■□□□ 1.56
EXOSC3-202ENST00000396521 IP6K1Q92551 441 aa24.77■■□□□ 1.56
EXOSC3-202ENST00000396521 USP54Q70EL1 1684 aa24.77■■□□□ 1.56
EXOSC3-202ENST00000396521 SLC27A3Q5K4L6 730 aa24.76■■□□□ 1.55
EXOSC3-202ENST00000396521 SLC16A10Q8TF71 515 aa24.76■■□□□ 1.55
EXOSC3-202ENST00000396521 NHSQ6T4R5 1651 aa24.75■■□□□ 1.55
EXOSC3-202ENST00000396521 ARXQ96QS3 562 aa24.74■■□□□ 1.55
EXOSC3-202ENST00000396521 MAP3K5Q99683 1374 aa24.74■■□□□ 1.55
EXOSC3-202ENST00000396521 A0A1W2PP64 1363 aa24.71■■□□□ 1.55
EXOSC3-202ENST00000396521 MYOM1P52179 1685 aa24.69■■□□□ 1.54
EXOSC3-202ENST00000396521 HMGB2P26583 209 aaKnown RBP24.69■■□□□ 1.54
EXOSC3-202ENST00000396521 COG3Q96JB2 828 aa24.69■■□□□ 1.54
EXOSC3-202ENST00000396521 TONSLQ96HA7 1378 aa24.68■■□□□ 1.54
EXOSC3-202ENST00000396521 ZNF784Q8NCA9 323 aaPredicted RBP24.68■■□□□ 1.54
EXOSC3-202ENST00000396521 DDX54Q8TDD1 881 aaKnown RBP24.68■■□□□ 1.54
EXOSC3-202ENST00000396521 LRRC4BQ9NT99 713 aa24.68■■□□□ 1.54
EXOSC3-202ENST00000396521 UTRNP46939 3433 aa24.67■■□□□ 1.54
EXOSC3-202ENST00000396521 POLD1P28340 1107 aa24.66■■□□□ 1.54
EXOSC3-202ENST00000396521 AKT1S1Q96B36 256 aa24.66■■□□□ 1.54
EXOSC3-202ENST00000396521 ZNF827Q17R98 1081 aa24.65■■□□□ 1.54
EXOSC3-202ENST00000396521 PAPPAQ13219 1627 aa24.64■■□□□ 1.54
EXOSC3-202ENST00000396521 AMPHP49418 695 aa24.64■■□□□ 1.54
EXOSC3-202ENST00000396521 LTN1O94822 1766 aa24.64■■□□□ 1.53
EXOSC3-202ENST00000396521 CGNL1Q0VF96 1302 aa24.63■■□□□ 1.53
EXOSC3-202ENST00000396521 ZCRB1Q8TBF4 217 aaKnown RBP24.63■■□□□ 1.53
EXOSC3-202ENST00000396521 LTV1Q96GA3 475 aaPredicted RBP24.63■■□□□ 1.53
EXOSC3-202ENST00000396521 ANKRD36BQ8N2N9 1353 aa24.63■■□□□ 1.53
EXOSC3-202ENST00000396521 HOXC9P31274 260 aa24.62■■□□□ 1.53
EXOSC3-202ENST00000396521 TESK2Q96S53 571 aa24.62■■□□□ 1.53
EXOSC3-202ENST00000396521 TFCP2L1Q9NZI6 479 aa24.62■■□□□ 1.53
EXOSC3-202ENST00000396521 MAP3K19Q56UN5 1328 aa24.61■■□□□ 1.53
EXOSC3-202ENST00000396521 BTAF1O14981 1849 aa24.61■■□□□ 1.53
EXOSC3-202ENST00000396521 PRIM1P49642 420 aaKnown RBP24.61■■□□□ 1.53
EXOSC3-202ENST00000396521 SYTL4Q96C24 671 aaPredicted RBP24.61■■□□□ 1.53
EXOSC3-202ENST00000396521 FAM208AQ9UK61 1670 aaKnown RBP24.6■■□□□ 1.53
EXOSC3-202ENST00000396521 ST20-MTHFSA0A0A6YYL1 179 aa24.59■■□□□ 1.53
EXOSC3-202ENST00000396521 GPR162Q16538 588 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms