RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 U2SURPO15042 1029 aaKnown RBP13.3□□□□□ -0.28
TUBB-208ENST00000396389 ADAMTS2O95450 1211 aa13.3□□□□□ -0.28
TUBB-208ENST00000396389 EDC4Q6P2E9 1401 aaKnown RBP13.3□□□□□ -0.28
TUBB-208ENST00000396389 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
TUBB-208ENST00000396389 MS4A1P11836 297 aa13.3□□□□□ -0.28
TUBB-208ENST00000396389 RALBP1Q15311 655 aa13.3□□□□□ -0.28
TUBB-208ENST00000396389 HSP90AB2PQ58FF8 381 aa13.29□□□□□ -0.28
TUBB-208ENST00000396389 CCDC146Q8IYE0 955 aa13.29□□□□□ -0.28
TUBB-208ENST00000396389 PARD3Q8TEW0 1356 aa13.28□□□□□ -0.28
TUBB-208ENST00000396389 AMPHP49418 695 aa13.28□□□□□ -0.28
TUBB-208ENST00000396389 PDE4CQ08493 712 aa13.28□□□□□ -0.28
TUBB-208ENST00000396389 NLRP13Q86W25 1043 aa13.28□□□□□ -0.28
TUBB-208ENST00000396389 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
TUBB-208ENST00000396389 GCP02774 474 aa13.27□□□□□ -0.28
TUBB-208ENST00000396389 DDRGK1Q96HY6 314 aa13.27□□□□□ -0.28
TUBB-208ENST00000396389 DCCP43146 1447 aa13.27□□□□□ -0.29
TUBB-208ENST00000396389 HSPA1LP34931 641 aa13.26□□□□□ -0.29
TUBB-208ENST00000396389 NCOA3Q9Y6Q9 1424 aa13.26□□□□□ -0.29
TUBB-208ENST00000396389 HMOX1P09601 288 aa13.26□□□□□ -0.29
TUBB-208ENST00000396389 RGS3P49796 1198 aa13.26□□□□□ -0.29
TUBB-208ENST00000396389 MAP3K19Q56UN5 1328 aa13.26□□□□□ -0.29
TUBB-208ENST00000396389 NEUROD2Q15784 382 aa13.26□□□□□ -0.29
TUBB-208ENST00000396389 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
TUBB-208ENST00000396389 SPATA31A3Q5VYP0 1347 aa13.25□□□□□ -0.29
TUBB-208ENST00000396389 TTC21AQ8NDW8 1320 aa13.24□□□□□ -0.29
TUBB-208ENST00000396389 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
TUBB-208ENST00000396389 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
TUBB-208ENST00000396389 ADAMTS8Q9UP79 889 aa13.24□□□□□ -0.29
TUBB-208ENST00000396389 AXIN2Q9Y2T1 843 aa13.23□□□□□ -0.29
TUBB-208ENST00000396389 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
TUBB-208ENST00000396389 WDR43Q15061 677 aaKnown RBP eCLIP13.23□□□□□ -0.29
TUBB-208ENST00000396389 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
TUBB-208ENST00000396389 TOPAZ1Q8N9V7 1692 aa13.23□□□□□ -0.29
TUBB-208ENST00000396389 SOS2Q07890 1332 aaPredicted RBP13.23□□□□□ -0.29
TUBB-208ENST00000396389 LRRC59Q96AG4 307 aaKnown RBP13.23□□□□□ -0.29
TUBB-208ENST00000396389 PRDM11Q9NQV5 511 aa13.22□□□□□ -0.29
TUBB-208ENST00000396389 RRP7AQ9Y3A4 280 aaKnown RBP13.22□□□□□ -0.29
TUBB-208ENST00000396389 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
TUBB-208ENST00000396389 ROBO1Q9Y6N7 1651 aa13.22□□□□□ -0.29
TUBB-208ENST00000396389 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
TUBB-208ENST00000396389 AEBP1Q8IUX7 1158 aa13.2□□□□□ -0.3
TUBB-208ENST00000396389 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
TUBB-208ENST00000396389 PXDNQ92626 1479 aa13.2□□□□□ -0.3
TUBB-208ENST00000396389 C8orf34Q49A92 452 aa13.2□□□□□ -0.3
TUBB-208ENST00000396389 CFAP53Q96M91 514 aa13.2□□□□□ -0.3
TUBB-208ENST00000396389 RRAGDQ9NQL2 400 aaPredicted RBP13.2□□□□□ -0.3
TUBB-208ENST00000396389 TNS3Q68CZ2 1445 aa13.2□□□□□ -0.3
TUBB-208ENST00000396389 OVOS2A0A0J9YW53 1432 aa13.19□□□□□ -0.3
TUBB-208ENST00000396389 OVOS2Q6IE36 1432 aa13.19□□□□□ -0.3
TUBB-208ENST00000396389 DIAPH1O60610 1272 aaKnown RBP13.19□□□□□ -0.3
TUBB-208ENST00000396389 PIK3C2AO00443 1686 aa13.18□□□□□ -0.3
TUBB-208ENST00000396389 HOXC9P31274 260 aa13.18□□□□□ -0.3
TUBB-208ENST00000396389 C8orf37Q96NL8 207 aa13.18□□□□□ -0.3
TUBB-208ENST00000396389 NSD2O96028 1365 aa13.18□□□□□ -0.3
TUBB-208ENST00000396389 EIF4A2Q14240 407 aaKnown RBP13.18□□□□□ -0.3
TUBB-208ENST00000396389 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
TUBB-208ENST00000396389 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
TUBB-208ENST00000396389 EP400Q96L91 3159 aa13.17□□□□□ -0.3
TUBB-208ENST00000396389 BRD4O60885 1362 aaPredicted RBP13.17□□□□□ -0.3
TUBB-208ENST00000396389 NPC1L1Q9UHC9 1359 aa13.17□□□□□ -0.3
TUBB-208ENST00000396389 FAM83GA6ND36 823 aa13.17□□□□□ -0.3
TUBB-208ENST00000396389 MON2Q7Z3U7 1717 aa13.17□□□□□ -0.3
TUBB-208ENST00000396389 FAM161AQ3B820 660 aa13.16□□□□□ -0.3
TUBB-208ENST00000396389 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
TUBB-208ENST00000396389 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
TUBB-208ENST00000396389 KCNH5Q8NCM2 988 aa13.16□□□□□ -0.3
TUBB-208ENST00000396389 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
TUBB-208ENST00000396389 AKAP12Q02952 1782 aa13.16□□□□□ -0.3
TUBB-208ENST00000396389 CCDC9Q9Y3X0 531 aaKnown RBP13.16□□□□□ -0.3
TUBB-208ENST00000396389 ARHGEF25Q86VW2 580 aa13.16□□□□□ -0.3
TUBB-208ENST00000396389 BTG4Q9NY30 223 aa13.16□□□□□ -0.3
TUBB-208ENST00000396389 EVA1CP58658 441 aa13.14□□□□□ -0.31
TUBB-208ENST00000396389 ANKRD24Q8TF21 1146 aa13.14□□□□□ -0.31
TUBB-208ENST00000396389 KDM2BQ8NHM5 1336 aa13.14□□□□□ -0.31
TUBB-208ENST00000396389 NRKQ7Z2Y5 1582 aa13.14□□□□□ -0.31
TUBB-208ENST00000396389 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
TUBB-208ENST00000396389 ARHGEF10O15013 1369 aa13.14□□□□□ -0.31
TUBB-208ENST00000396389 APAF1O14727 1248 aa13.14□□□□□ -0.31
TUBB-208ENST00000396389 MEX3CQ5U5Q3 659 aaKnown RBP13.14□□□□□ -0.31
TUBB-208ENST00000396389 SEC24BO95487 1268 aa13.13□□□□□ -0.31
TUBB-208ENST00000396389 PRKAR2BP31323 418 aa13.13□□□□□ -0.31
TUBB-208ENST00000396389 PDE3BQ13370 1112 aa13.13□□□□□ -0.31
TUBB-208ENST00000396389 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
TUBB-208ENST00000396389 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
TUBB-208ENST00000396389 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
TUBB-208ENST00000396389 NGLY1Q96IV0 654 aa13.13□□□□□ -0.31
TUBB-208ENST00000396389 EYA1Q99502 592 aa13.13□□□□□ -0.31
TUBB-208ENST00000396389 SRCAPQ6ZRS2 3230 aa13.13□□□□□ -0.31
TUBB-208ENST00000396389 IL13P35225 146 aa13.12□□□□□ -0.31
TUBB-208ENST00000396389 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
TUBB-208ENST00000396389 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
TUBB-208ENST00000396389 TOM1L2Q6ZVM7 507 aa13.12□□□□□ -0.31
TUBB-208ENST00000396389 PHACTR3Q96KR7 559 aa13.12□□□□□ -0.31
TUBB-208ENST00000396389 USP19O94966 1318 aa13.12□□□□□ -0.31
TUBB-208ENST00000396389 KIF20BQ96Q89 1820 aa13.12□□□□□ -0.31
TUBB-208ENST00000396389 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
TUBB-208ENST00000396389 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
TUBB-208ENST00000396389 IP6K1Q92551 441 aa13.12□□□□□ -0.31
TUBB-208ENST00000396389 KIF1AQ12756 1690 aa13.11□□□□□ -0.31
TUBB-208ENST00000396389 FLT4P35916 1363 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms