RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 PTMAP06454 111 aaKnown RBP22.36■■□□□ 1.17
HERPUD2-202ENST00000396081 MINK1Q8N4C8 1332 aaPredicted RBP22.36■■□□□ 1.17
HERPUD2-202ENST00000396081 GPT2Q8TD30 523 aa22.36■■□□□ 1.17
HERPUD2-202ENST00000396081 CFAP74Q9C0B2 1584 aa22.35■■□□□ 1.17
HERPUD2-202ENST00000396081 ST18O60284 1047 aa22.35■■□□□ 1.17
HERPUD2-202ENST00000396081 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.35■■□□□ 1.17
HERPUD2-202ENST00000396081 MYO3AQ8NEV4 1616 aa22.35■■□□□ 1.17
HERPUD2-202ENST00000396081 OTUD7AQ8TE49 926 aaPredicted RBP22.34■■□□□ 1.17
HERPUD2-202ENST00000396081 USP26Q9BXU7 913 aa22.34■■□□□ 1.17
HERPUD2-202ENST00000396081 HS1BP3Q53T59 392 aa22.34■■□□□ 1.17
HERPUD2-202ENST00000396081 ZKSCAN5Q9Y2L8 839 aa22.34■■□□□ 1.17
HERPUD2-202ENST00000396081 ATP7AQ04656 1500 aa22.34■■□□□ 1.17
HERPUD2-202ENST00000396081 MPNDQ8N594 471 aa22.34■■□□□ 1.17
HERPUD2-202ENST00000396081 MROH2AA6NES4 1674 aa22.34■■□□□ 1.17
HERPUD2-202ENST00000396081 ZNF500O60304 480 aaPredicted RBP22.33■■□□□ 1.16
HERPUD2-202ENST00000396081 PLEKHG5O94827 1062 aa22.33■■□□□ 1.16
HERPUD2-202ENST00000396081 INTS3Q68E01 1043 aaKnown RBP22.33■■□□□ 1.16
HERPUD2-202ENST00000396081 PHACTR3Q96KR7 559 aa22.33■■□□□ 1.16
HERPUD2-202ENST00000396081 TERF2IPQ9NYB0 399 aa22.33■■□□□ 1.16
HERPUD2-202ENST00000396081 FOXD4L6Q3SYB3 417 aaPredicted RBP22.32■■□□□ 1.16
HERPUD2-202ENST00000396081 FOXD4L3Q6VB84 417 aaPredicted RBP22.32■■□□□ 1.16
HERPUD2-202ENST00000396081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.32■■□□□ 1.161e-6■■■□□ 15
HERPUD2-202ENST00000396081 TMEM63CQ9P1W3 806 aa22.32■■□□□ 1.16
HERPUD2-202ENST00000396081 NRXN1Q9ULB1 1477 aa22.32■■□□□ 1.16
HERPUD2-202ENST00000396081 TERF1P54274 439 aa22.32■■□□□ 1.16
HERPUD2-202ENST00000396081 TTC22Q5TAA0 569 aa22.32■■□□□ 1.16
HERPUD2-202ENST00000396081 NSFL1CQ9UNZ2 370 aaKnown RBP22.32■■□□□ 1.16
HERPUD2-202ENST00000396081 PDLIM2Q96JY6 352 aa22.32■■□□□ 1.16
HERPUD2-202ENST00000396081 DEPDC5O75140 1603 aa22.31■■□□□ 1.16
HERPUD2-202ENST00000396081 SMARCA5O60264 1052 aaPredicted RBP22.31■■□□□ 1.16
HERPUD2-202ENST00000396081 FCHSD2O94868 740 aa22.31■■□□□ 1.16
HERPUD2-202ENST00000396081 TWISTNBQ3B726 338 aaPredicted RBP22.31■■□□□ 1.16
HERPUD2-202ENST00000396081 TPRNQ4KMQ1 711 aa22.31■■□□□ 1.16
HERPUD2-202ENST00000396081 DNTTIP2Q5QJE6 756 aaKnown RBP22.31■■□□□ 1.16
HERPUD2-202ENST00000396081 MAP7D2Q96T17 732 aa22.31■■□□□ 1.16
HERPUD2-202ENST00000396081 CYP2E1P05181 493 aaPredicted RBP22.31■■□□□ 1.16
HERPUD2-202ENST00000396081 CASC1Q6TDU7 716 aa22.31■■□□□ 1.16
HERPUD2-202ENST00000396081 CWC22Q9HCG8 908 aaKnown RBP22.31■■□□□ 1.16
HERPUD2-202ENST00000396081 NOL8Q76FK4 1167 aaKnown RBP22.3■■□□□ 1.16
HERPUD2-202ENST00000396081 ZNF428Q96B54 188 aa22.3■■□□□ 1.16
HERPUD2-202ENST00000396081 ARHGAP45Q92619 1136 aa22.29■■□□□ 1.16
HERPUD2-202ENST00000396081 CSPP1Q1MSJ5 1256 aa22.29■■□□□ 1.16
HERPUD2-202ENST00000396081 LRSAM1Q6UWE0 723 aa22.29■■□□□ 1.16
HERPUD2-202ENST00000396081 MBIPQ9NS73 344 aa22.29■■□□□ 1.16
HERPUD2-202ENST00000396081 CCDC39Q9UFE4 941 aa22.29■■□□□ 1.16
HERPUD2-202ENST00000396081 ZDHHC9Q9Y397 364 aa22.29■■□□□ 1.16
HERPUD2-202ENST00000396081 FANCAO15360 1455 aa22.28■■□□□ 1.16
HERPUD2-202ENST00000396081 PODXL2Q9NZ53 605 aa22.28■■□□□ 1.16
HERPUD2-202ENST00000396081 VWDEQ8N2E2 1590 aa22.28■■□□□ 1.16
HERPUD2-202ENST00000396081 SDSP20132 328 aa22.28■■□□□ 1.16
HERPUD2-202ENST00000396081 VGFO15240 615 aaPredicted RBP22.27■■□□□ 1.16
HERPUD2-202ENST00000396081 GNAI1P63096 354 aa22.27■■□□□ 1.16
HERPUD2-202ENST00000396081 API5Q9BZZ5 524 aaKnown RBP22.27■■□□□ 1.16
HERPUD2-202ENST00000396081 SETBP1Q9Y6X0 1596 aa22.27■■□□□ 1.16
HERPUD2-202ENST00000396081 C8orf58Q8NAV2 365 aa22.27■■□□□ 1.16
HERPUD2-202ENST00000396081 PRDM10Q9NQV6 1147 aa22.27■■□□□ 1.16
HERPUD2-202ENST00000396081 TULP4Q9NRJ4 1543 aa22.27■■□□□ 1.16
HERPUD2-202ENST00000396081 NFE2L2Q16236 605 aa22.27■■□□□ 1.15
HERPUD2-202ENST00000396081 MED14O60244 1454 aa22.26■■□□□ 1.15
HERPUD2-202ENST00000396081 ADGRB1O14514 1584 aa22.26■■□□□ 1.15
HERPUD2-202ENST00000396081 HDGFL2Q7Z4V5 671 aaPredicted RBP22.26■■□□□ 1.15
HERPUD2-202ENST00000396081 CFAP44Q96MT7 982 aa22.26■■□□□ 1.15
HERPUD2-202ENST00000396081 PUS7Q96PZ0 661 aaKnown RBP22.26■■□□□ 1.15
HERPUD2-202ENST00000396081 USP32Q8NFA0 1604 aa22.26■■□□□ 1.15
HERPUD2-202ENST00000396081 DCTPP1Q9H773 170 aa22.26■■□□□ 1.15
HERPUD2-202ENST00000396081 ZCCHC11Q5TAX3 1644 aaKnown RBP22.26■■□□□ 1.15
HERPUD2-202ENST00000396081 EFCAB6Q5THR3 1501 aa22.26■■□□□ 1.15
HERPUD2-202ENST00000396081 ABCC4O15439 1325 aa22.26■■□□□ 1.15
HERPUD2-202ENST00000396081 BRPF1P55201 1214 aaPredicted RBP22.25■■□□□ 1.15
HERPUD2-202ENST00000396081 NEURL4Q96JN8 1562 aa22.25■■□□□ 1.15
HERPUD2-202ENST00000396081 NEK4P51957 841 aa22.25■■□□□ 1.15
HERPUD2-202ENST00000396081 COL3A1P02461 1466 aaPredicted RBP22.24■■□□□ 1.15
HERPUD2-202ENST00000396081 SASS6Q6UVJ0 657 aa22.23■■□□□ 1.15
HERPUD2-202ENST00000396081 DYNC1I1O14576 645 aa22.23■■□□□ 1.15
HERPUD2-202ENST00000396081 REC8O95072 547 aa22.23■■□□□ 1.15
HERPUD2-202ENST00000396081 DCTN1Q14203 1278 aa22.23■■□□□ 1.15
HERPUD2-202ENST00000396081 PRAM1Q96QH2 718 aa22.23■■□□□ 1.15
HERPUD2-202ENST00000396081 CABP1Q9NZU7 370 aa22.23■■□□□ 1.15
HERPUD2-202ENST00000396081 IFT172Q9UG01 1749 aa22.23■■□□□ 1.15
HERPUD2-202ENST00000396081 FAM83GA6ND36 823 aa22.22■■□□□ 1.15
HERPUD2-202ENST00000396081 ADGRB3O60242 1522 aa22.22■■□□□ 1.15
HERPUD2-202ENST00000396081 RPGRIP1LQ68CZ1 1315 aa22.22■■□□□ 1.15
HERPUD2-202ENST00000396081 PPRC1Q5VV67 1664 aaKnown RBP22.21■■□□□ 1.15
HERPUD2-202ENST00000396081 IFT57Q9NWB7 429 aa22.21■■□□□ 1.15
HERPUD2-202ENST00000396081 PTCH1Q13635 1447 aa22.21■■□□□ 1.15
HERPUD2-202ENST00000396081 NPATQ14207 1427 aa22.21■■□□□ 1.15
HERPUD2-202ENST00000396081 MCM5P33992 734 aa22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 GDPD2Q9HCC8 539 aa22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 ZC3H13Q5T200 1668 aaKnown RBP22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 MROH1Q8NDA8 1641 aa22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 JARID2Q92833 1246 aaPredicted RBP22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 PRDM4Q9UKN5 801 aa22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 MBD3O95983 291 aa22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 TSC1Q92574 1164 aa22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 ZNF830Q96NB3 372 aaPredicted RBP22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 TSPY26PQ9H489 355 aa22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 POLKQ9UBT6 870 aa22.2■■□□□ 1.14
HERPUD2-202ENST00000396081 PIK3R4Q99570 1358 aa22.19■■□□□ 1.14
HERPUD2-202ENST00000396081 KIAA2012Q0VF49 1180 aa22.19■■□□□ 1.14
HERPUD2-202ENST00000396081 ERC2O15083 957 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms