RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ADGRL3Q9HAR2 1447 aa15.65■□□□□ 0.1
ITGB1-202ENST00000396033 KDM2BQ8NHM5 1336 aa15.65■□□□□ 0.1
ITGB1-202ENST00000396033 HSP90AB2PQ58FF8 381 aa15.64■□□□□ 0.09
ITGB1-202ENST00000396033 CENPQQ7L2Z9 268 aaPredicted RBP15.64■□□□□ 0.09
ITGB1-202ENST00000396033 COG6Q9Y2V7 657 aa15.64■□□□□ 0.09
ITGB1-202ENST00000396033 MAP3K19Q56UN5 1328 aa15.64■□□□□ 0.09
ITGB1-202ENST00000396033 CALD1Q05682 793 aaKnown RBP15.63■□□□□ 0.09
ITGB1-202ENST00000396033 NLRP6P59044 892 aa15.63■□□□□ 0.09
ITGB1-202ENST00000396033 SULT6B1Q6IMI4 303 aa15.63■□□□□ 0.09
ITGB1-202ENST00000396033 LAS1LQ9Y4W2 734 aaKnown RBP15.63■□□□□ 0.09
ITGB1-202ENST00000396033 TCERG1O14776 1098 aaKnown RBP15.63■□□□□ 0.09
ITGB1-202ENST00000396033 AEBP1Q8IUX7 1158 aa15.63■□□□□ 0.09
ITGB1-202ENST00000396033 ANO8Q9HCE9 1232 aaPredicted RBP15.63■□□□□ 0.09
ITGB1-202ENST00000396033 PHF8Q9UPP1 1060 aa15.63■□□□□ 0.09
ITGB1-202ENST00000396033 SBNO1A3KN83 1393 aa15.62■□□□□ 0.09
ITGB1-202ENST00000396033 LMOD3Q0VAK6 560 aa15.62■□□□□ 0.09
ITGB1-202ENST00000396033 THUMPD2Q9BTF0 503 aaKnown RBP15.62■□□□□ 0.09
ITGB1-202ENST00000396033 SMC4Q9NTJ3 1288 aa15.62■□□□□ 0.09
ITGB1-202ENST00000396033 FLT4P35916 1363 aa15.62■□□□□ 0.09
ITGB1-202ENST00000396033 DEKP35659 375 aaKnown RBP15.62■□□□□ 0.09
ITGB1-202ENST00000396033 C14orf37Q86TY3 774 aa15.62■□□□□ 0.09
ITGB1-202ENST00000396033 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
ITGB1-202ENST00000396033 NUTM2GQ5VZR2 741 aa15.61■□□□□ 0.09
ITGB1-202ENST00000396033 TNNQ9UQP3 1299 aa15.61■□□□□ 0.09
ITGB1-202ENST00000396033 DLG5Q8TDM6 1919 aa15.61■□□□□ 0.09
ITGB1-202ENST00000396033 RGPD1P0DJD0 1748 aa15.61■□□□□ 0.09
ITGB1-202ENST00000396033 AMPHP49418 695 aa15.6■□□□□ 0.09
ITGB1-202ENST00000396033 ZKSCAN2Q63HK3 967 aa15.6■□□□□ 0.09
ITGB1-202ENST00000396033 ABTB2Q8N961 1025 aa15.6■□□□□ 0.09
ITGB1-202ENST00000396033 RLBP1P12271 317 aa15.6■□□□□ 0.09
ITGB1-202ENST00000396033 SSH1Q8WYL5 1049 aa15.6■□□□□ 0.09
ITGB1-202ENST00000396033 CLUAP1Q96AJ1 413 aa15.6■□□□□ 0.09
ITGB1-202ENST00000396033 NWD1Q149M9 1564 aa15.59■□□□□ 0.09
ITGB1-202ENST00000396033 IFT57Q9NWB7 429 aa15.59■□□□□ 0.09
ITGB1-202ENST00000396033 USP54Q70EL1 1684 aa15.59■□□□□ 0.09
ITGB1-202ENST00000396033 ARHGEF10O15013 1369 aa15.59■□□□□ 0.09
ITGB1-202ENST00000396033 GNAI1P63096 354 aa15.59■□□□□ 0.09
ITGB1-202ENST00000396033 MARF1Q9Y4F3 1742 aaKnown RBP15.59■□□□□ 0.09
ITGB1-202ENST00000396033 ESCO1Q5FWF5 840 aa15.58■□□□□ 0.09
ITGB1-202ENST00000396033 SKAP1Q86WV1 359 aa15.58■□□□□ 0.08
ITGB1-202ENST00000396033 FTSJ3Q8IY81 847 aaKnown RBP15.58■□□□□ 0.08
ITGB1-202ENST00000396033 FAM83GA6ND36 823 aa15.57■□□□□ 0.08
ITGB1-202ENST00000396033 MS4A1P11836 297 aa15.57■□□□□ 0.08
ITGB1-202ENST00000396033 DZIP1LQ8IYY4 767 aaKnown RBP15.56■□□□□ 0.08
ITGB1-202ENST00000396033 DCTN1Q14203 1278 aa15.56■□□□□ 0.08
ITGB1-202ENST00000396033 MBIPQ9NS73 344 aa15.56■□□□□ 0.08
ITGB1-202ENST00000396033 ZNF853P0CG23 659 aa15.55■□□□□ 0.08
ITGB1-202ENST00000396033 AAMPQ13685 434 aa15.55■□□□□ 0.08
ITGB1-202ENST00000396033 KIF16BQ96L93 1317 aa15.55■□□□□ 0.08
ITGB1-202ENST00000396033 PSME1Q06323 249 aa15.55■□□□□ 0.08
ITGB1-202ENST00000396033 MVPQ14764 893 aaKnown RBP15.55■□□□□ 0.08
ITGB1-202ENST00000396033 ALDH1L2Q3SY69 923 aa15.55■□□□□ 0.08
ITGB1-202ENST00000396033 PROSER2Q86WR7 435 aaPredicted RBP15.55■□□□□ 0.08
ITGB1-202ENST00000396033 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
ITGB1-202ENST00000396033 KIF24Q5T7B8 1368 aa15.54■□□□□ 0.08
ITGB1-202ENST00000396033 TRIM27P14373 513 aa15.54■□□□□ 0.08
ITGB1-202ENST00000396033 NOB1Q9ULX3 412 aaKnown RBP15.54■□□□□ 0.08
ITGB1-202ENST00000396033 HOXC9P31274 260 aa15.54■□□□□ 0.08
ITGB1-202ENST00000396033 ATF7IPQ6VMQ6 1270 aa15.54■□□□□ 0.08
ITGB1-202ENST00000396033 ZNF428Q96B54 188 aa15.54■□□□□ 0.08
ITGB1-202ENST00000396033 IGHDP01880 384 aa15.53■□□□□ 0.08
ITGB1-202ENST00000396033 IGSF1Q8N6C5 1336 aa15.53■□□□□ 0.08
ITGB1-202ENST00000396033 EYA1Q99502 592 aa15.53■□□□□ 0.08
ITGB1-202ENST00000396033 KDRP35968 1356 aa15.52■□□□□ 0.08
ITGB1-202ENST00000396033 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.07
ITGB1-202ENST00000396033 PDE4AP27815 886 aa15.52■□□□□ 0.07
ITGB1-202ENST00000396033 ORAI2Q96SN7 254 aa15.52■□□□□ 0.07
ITGB1-202ENST00000396033 TSPYL6Q8N831 410 aa15.51■□□□□ 0.07
ITGB1-202ENST00000396033 VAMP4O75379 141 aa15.51■□□□□ 0.07
ITGB1-202ENST00000396033 MCM10Q7L590 875 aa15.51■□□□□ 0.07
ITGB1-202ENST00000396033 ITPRIPQ8IWB1 547 aa15.51■□□□□ 0.07
ITGB1-202ENST00000396033 RTL1A6NKG5 1358 aa15.51■□□□□ 0.07
ITGB1-202ENST00000396033 ELL2O00472 640 aaPredicted RBP15.5■□□□□ 0.07
ITGB1-202ENST00000396033 TWISTNBQ3B726 338 aaPredicted RBP15.5■□□□□ 0.07
ITGB1-202ENST00000396033 LTV1Q96GA3 475 aaPredicted RBP15.5■□□□□ 0.07
ITGB1-202ENST00000396033 PCDHB15Q9Y5E8 787 aa15.5■□□□□ 0.07
ITGB1-202ENST00000396033 LTN1O94822 1766 aa15.5■□□□□ 0.07
ITGB1-202ENST00000396033 FOXO3O43524 673 aa15.49■□□□□ 0.07
ITGB1-202ENST00000396033 MTHFSDQ2M296 383 aaKnown RBP15.49■□□□□ 0.07
ITGB1-202ENST00000396033 BACH2Q9BYV9 841 aa15.49■□□□□ 0.07
ITGB1-202ENST00000396033 NFAT5O94916 1531 aa15.49■□□□□ 0.07
ITGB1-202ENST00000396033 RGS3P49796 1198 aa15.49■□□□□ 0.07
ITGB1-202ENST00000396033 XPCQ01831 940 aaPredicted RBP15.49■□□□□ 0.07
ITGB1-202ENST00000396033 DDX19BQ9UMR2 479 aa15.49■□□□□ 0.07
ITGB1-202ENST00000396033 BRPF1P55201 1214 aaPredicted RBP15.48■□□□□ 0.07
ITGB1-202ENST00000396033 C8orf58Q8NAV2 365 aa15.48■□□□□ 0.07
ITGB1-202ENST00000396033 TMEM57Q8N5G2 664 aa15.48■□□□□ 0.07
ITGB1-202ENST00000396033 MRPL50Q8N5N7 158 aaKnown RBP15.48■□□□□ 0.07
ITGB1-202ENST00000396033 GAS2L2Q8NHY3 880 aa15.48■□□□□ 0.07
ITGB1-202ENST00000396033 RTF1Q92541 710 aaKnown RBP15.47■□□□□ 0.07
ITGB1-202ENST00000396033 C19orf44Q9H6X5 657 aa15.47■□□□□ 0.07
ITGB1-202ENST00000396033 KCNH5Q8NCM2 988 aa15.47■□□□□ 0.07
ITGB1-202ENST00000396033 C1orf167Q5SNV9 1468 aa15.47■□□□□ 0.07
ITGB1-202ENST00000396033 ZBTB7CA1YPR0 619 aa15.47■□□□□ 0.07
ITGB1-202ENST00000396033 ANP32AP39687 249 aaKnown RBP15.46■□□□□ 0.07
ITGB1-202ENST00000396033 KIF1AQ12756 1690 aa15.46■□□□□ 0.07
ITGB1-202ENST00000396033 CHL1O00533 1208 aa15.46■□□□□ 0.06
ITGB1-202ENST00000396033 IP6K1Q92551 441 aa15.46■□□□□ 0.06
ITGB1-202ENST00000396033 RWDD1Q9H446 243 aaPredicted RBP15.46■□□□□ 0.06
ITGB1-202ENST00000396033 LMOD2Q6P5Q4 547 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms