RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 NGEFQ8N5V2 710 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 CCNB3Q8WWL7 1395 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 DZIP1LQ8IYY4 767 aaKnown RBP9.39□□□□□ -0.91
TRPS1-203ENST00000395715 KIF18AQ8NI77 898 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 C9orf78Q9NZ63 289 aaPredicted RBP9.39□□□□□ -0.91
TRPS1-203ENST00000395715 GOLGA6L9A6NEM1 432 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 HOOK3Q86VS8 718 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 RSRC1Q96IZ7 334 aaKnown RBP9.39□□□□□ -0.91
TRPS1-203ENST00000395715 HOMER2Q9NSB8 354 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 CWC25Q9NXE8 425 aaPredicted RBP9.39□□□□□ -0.91
TRPS1-203ENST00000395715 KIF5BP33176 963 aa9.38□□□□□ -0.91
TRPS1-203ENST00000395715 APBB1IPQ7Z5R6 666 aaPredicted RBP9.38□□□□□ -0.91
TRPS1-203ENST00000395715 CEBPZQ03701 1054 aaKnown RBP9.38□□□□□ -0.91
TRPS1-203ENST00000395715 TTC31Q49AM3 519 aaPredicted RBP9.38□□□□□ -0.91
TRPS1-203ENST00000395715 NUTM2DQ5VT03 806 aaPredicted RBP9.38□□□□□ -0.91
TRPS1-203ENST00000395715 PAXIP1Q6ZW49 1069 aaPredicted RBP9.38□□□□□ -0.91
TRPS1-203ENST00000395715 ZKSCAN2Q63HK3 967 aa9.38□□□□□ -0.91
TRPS1-203ENST00000395715 ROCK1Q13464 1354 aa9.38□□□□□ -0.91
TRPS1-203ENST00000395715 JMYQ8N9B5 988 aa9.38□□□□□ -0.91
TRPS1-203ENST00000395715 CRBNQ96SW2 442 aa9.38□□□□□ -0.91
TRPS1-203ENST00000395715 MXRA7P84157 204 aa9.38□□□□□ -0.91
TRPS1-203ENST00000395715 TAOK3Q9H2K8 898 aa9.38□□□□□ -0.91
TRPS1-203ENST00000395715 PPP1R12BO60237 982 aaPredicted RBP9.38□□□□□ -0.91
TRPS1-203ENST00000395715 KIF5CO60282 957 aa9.38□□□□□ -0.91
TRPS1-203ENST00000395715 CCDC178Q5BJE1 867 aa9.38□□□□□ -0.91
TRPS1-203ENST00000395715 NINLQ9Y2I6 1382 aa9.38□□□□□ -0.91
TRPS1-203ENST00000395715 FIBPO43427 364 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 RAB3IL1Q8TBN0 382 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 IKQ13123 557 aaPredicted RBP9.37□□□□□ -0.91
TRPS1-203ENST00000395715 RBM28Q9NW13 759 aaKnown RBP9.37□□□□□ -0.91
TRPS1-203ENST00000395715 KDM4AO75164 1064 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 PDE1CQ14123 709 aaPredicted RBP9.37□□□□□ -0.91
TRPS1-203ENST00000395715 ANKS4BQ8N8V4 417 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 COMMD10Q9Y6G5 202 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 GOLIM4O00461 696 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 TPD52P55327 224 aaPredicted RBP9.37□□□□□ -0.91
TRPS1-203ENST00000395715 RRP1P56182 461 aaKnown RBP9.37□□□□□ -0.91
TRPS1-203ENST00000395715 GBP6Q6ZN66 633 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 PLIN1O60240 522 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 TRIM21P19474 475 aaKnown RBP9.37□□□□□ -0.91
TRPS1-203ENST00000395715 NAA25Q14CX7 972 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 RAI14Q9P0K7 980 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 ERC2O15083 957 aa9.37□□□□□ -0.91
TRPS1-203ENST00000395715 ZSCAN12O43309 604 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 HYPKQ9NX55 129 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 FSD2A1L4K1 749 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 SART3Q15020 963 aaKnown RBP9.36□□□□□ -0.91
TRPS1-203ENST00000395715 ANAPC4Q9UJX5 808 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 DDX19BQ9UMR2 479 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 SPDYE4A6NLX3 237 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 STK38Q15208 465 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 ERC1Q8IUD2 1116 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 BCL2L13Q9BXK5 485 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRPS1-203ENST00000395715 SEPT8Q92599 483 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 POTEJP0CG39 1038 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 LIG1P18858 919 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 C10orf67Q8IYJ2 551 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 MICALL1Q8N3F8 863 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 ZHX3Q9H4I2 956 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
TRPS1-203ENST00000395715 SCLT1Q96NL6 688 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 DYNC1I1O14576 645 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 ROCK2O75116 1388 aaKnown RBP9.36□□□□□ -0.91
TRPS1-203ENST00000395715 SPA17Q15506 151 aa9.36□□□□□ -0.91
TRPS1-203ENST00000395715 ATP2C2O75185 946 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 ATP2B1P20020 1258 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 C1orf141Q5JVX7 400 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 ZSCAN30Q86W11 494 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 FAM114A2Q9NRY5 505 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 POTEB2H3BUK9 544 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 MCM2P49736 904 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 EIF5P55010 431 aaKnown RBP9.35□□□□□ -0.91
TRPS1-203ENST00000395715 MKRN1Q9UHC7 482 aaKnown RBP9.35□□□□□ -0.91
TRPS1-203ENST00000395715 PSMC4P43686 418 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 PPP1R1BQ9UD71 204 aaPredicted RBP9.35□□□□□ -0.91
TRPS1-203ENST00000395715 SMTNL1A8MU46 457 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 CEP112Q8N8E3 955 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 SMC6Q96SB8 1091 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 EXOC6Q8TAG9 804 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 MTMR7Q9Y216 660 aa9.35□□□□□ -0.91
TRPS1-203ENST00000395715 ME1P48163 572 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 PPP1R14CQ8TAE6 165 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 SREK1Q8WXA9 508 aaKnown RBP9.34□□□□□ -0.91
TRPS1-203ENST00000395715 NSRP1Q9H0G5 558 aaKnown RBP9.34□□□□□ -0.91
TRPS1-203ENST00000395715 TACC1O75410 805 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 NBPF1Q3BBV0 1214 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 PPP1R9BQ96SB3 815 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 A0A1B0GUA9 196 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 URI1O94763 535 aaPredicted RBP9.34□□□□□ -0.91
TRPS1-203ENST00000395715 MRVI1Q9Y6F6 885 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 HLTFQ14527 1009 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRPS1-203ENST00000395715 LARP1Q6PKG0 1096 aaKnown RBP9.34□□□□□ -0.91
TRPS1-203ENST00000395715 CTNNBL1Q8WYA6 563 aaPredicted RBP9.34□□□□□ -0.91
TRPS1-203ENST00000395715 NAA15Q9BXJ9 866 aaKnown RBP9.34□□□□□ -0.91
TRPS1-203ENST00000395715 ZNF853P0CG23 659 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 DNAJC21Q5F1R6 531 aaKnown RBP9.34□□□□□ -0.91
TRPS1-203ENST00000395715 G3BP1Q13283 466 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRPS1-203ENST00000395715 TSNARE1Q96NA8 513 aa9.34□□□□□ -0.91
TRPS1-203ENST00000395715 PSMD1Q99460 953 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms