RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 MAP3K5Q99683 1374 aa9.01□□□□□ -0.97
SMARCAD1-203ENST00000394961 NCAPD2Q15021 1401 aa9.01□□□□□ -0.97
SMARCAD1-203ENST00000394961 NBPF1Q3BBV0 1214 aa9□□□□□ -0.97
SMARCAD1-203ENST00000394961 ARHGEF25Q86VW2 580 aa9□□□□□ -0.97
SMARCAD1-203ENST00000394961 HIRIP3Q9BW71 556 aaPredicted RBP9□□□□□ -0.97
SMARCAD1-203ENST00000394961 TAF1LQ8IZX4 1826 aa9□□□□□ -0.97
SMARCAD1-203ENST00000394961 DOT1LQ8TEK3 1739 aa9□□□□□ -0.97
SMARCAD1-203ENST00000394961 RTL1A6NKG5 1358 aa9□□□□□ -0.97
SMARCAD1-203ENST00000394961 KIF24Q5T7B8 1368 aa9□□□□□ -0.97
SMARCAD1-203ENST00000394961 TTC21BQ7Z4L5 1316 aa9□□□□□ -0.97
SMARCAD1-203ENST00000394961 CARD10Q9BWT7 1032 aa8.99□□□□□ -0.97
SMARCAD1-203ENST00000394961 KDM2AQ9Y2K7 1162 aa8.99□□□□□ -0.97
SMARCAD1-203ENST00000394961 ROCK2O75116 1388 aaKnown RBP8.99□□□□□ -0.97
SMARCAD1-203ENST00000394961 SAFB2Q14151 953 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMARCAD1-203ENST00000394961 RGPD2P0DJD1 1756 aa8.99□□□□□ -0.97
SMARCAD1-203ENST00000394961 CHD4Q14839 1912 aa8.99□□□□□ -0.97
SMARCAD1-203ENST00000394961 L3MBTL2Q969R5 705 aa8.98□□□□□ -0.97
SMARCAD1-203ENST00000394961 ABTB2Q8N961 1025 aa8.98□□□□□ -0.97
SMARCAD1-203ENST00000394961 DEFB132Q7Z7B7 95 aa8.98□□□□□ -0.97
SMARCAD1-203ENST00000394961 BCL11BQ9C0K0 894 aaPredicted RBP8.97□□□□□ -0.97
SMARCAD1-203ENST00000394961 C5P01031 1676 aa8.97□□□□□ -0.97
SMARCAD1-203ENST00000394961 LARP1Q6PKG0 1096 aaKnown RBP8.96□□□□□ -0.97
SMARCAD1-203ENST00000394961 KTN1Q86UP2 1357 aaKnown RBP8.96□□□□□ -0.98
SMARCAD1-203ENST00000394961 NSD2O96028 1365 aa8.95□□□□□ -0.98
SMARCAD1-203ENST00000394961 CCDC9Q9Y3X0 531 aaKnown RBP8.95□□□□□ -0.98
SMARCAD1-203ENST00000394961 ITGB4P16144 1822 aa8.95□□□□□ -0.98
SMARCAD1-203ENST00000394961 PAK3O75914 559 aaPredicted RBP8.95□□□□□ -0.98
SMARCAD1-203ENST00000394961 CABP1Q9NZU7 370 aa8.95□□□□□ -0.98
SMARCAD1-203ENST00000394961 SRPK2P78362 688 aaKnown RBP8.94□□□□□ -0.98
SMARCAD1-203ENST00000394961 KIF13BQ9NQT8 1826 aa8.94□□□□□ -0.98
SMARCAD1-203ENST00000394961 TOGARAM1Q9Y4F4 1720 aa8.94□□□□□ -0.98
SMARCAD1-203ENST00000394961 MAP2P11137 1827 aaKnown RBP8.94□□□□□ -0.98
SMARCAD1-203ENST00000394961 LMOD2Q6P5Q4 547 aa8.94□□□□□ -0.98
SMARCAD1-203ENST00000394961 CABP2Q9NPB3 220 aa8.94□□□□□ -0.98
SMARCAD1-203ENST00000394961 EN1Q05925 392 aaPredicted RBP8.94□□□□□ -0.98
SMARCAD1-203ENST00000394961 EZH2Q15910 746 aaKnown RBP8.94□□□□□ -0.98
SMARCAD1-203ENST00000394961 HMGB2P26583 209 aaKnown RBP8.93□□□□□ -0.98
SMARCAD1-203ENST00000394961 EVA1CP58658 441 aa8.93□□□□□ -0.98
SMARCAD1-203ENST00000394961 NBPF14Q5TI25 921 aa8.93□□□□□ -0.98
SMARCAD1-203ENST00000394961 ANKRD36BQ8N2N9 1353 aa8.93□□□□□ -0.98
SMARCAD1-203ENST00000394961 PDE3BQ13370 1112 aa8.93□□□□□ -0.98
SMARCAD1-203ENST00000394961 TIMELESSQ9UNS1 1208 aa8.93□□□□□ -0.98
SMARCAD1-203ENST00000394961 CHRNA2Q15822 529 aa8.93□□□□□ -0.98
SMARCAD1-203ENST00000394961 CLSPNQ9HAW4 1339 aa8.92□□□□□ -0.98
SMARCAD1-203ENST00000394961 ERBB3P21860 1342 aa8.92□□□□□ -0.98
SMARCAD1-203ENST00000394961 ZC3H6P61129 1189 aaKnown RBP8.92□□□□□ -0.98
SMARCAD1-203ENST00000394961 A0A1W2PP64 1363 aa8.92□□□□□ -0.98
SMARCAD1-203ENST00000394961 CGNL1Q0VF96 1302 aa8.91□□□□□ -0.98
SMARCAD1-203ENST00000394961 NLRP6P59044 892 aa8.91□□□□□ -0.98
SMARCAD1-203ENST00000394961 COL5A3P25940 1745 aaPredicted RBP8.91□□□□□ -0.98
SMARCAD1-203ENST00000394961 UBR3Q6ZT12 1888 aa8.91□□□□□ -0.98
SMARCAD1-203ENST00000394961 TRIM37O94972 964 aa8.91□□□□□ -0.98
SMARCAD1-203ENST00000394961 APBA3O96018 575 aa8.91□□□□□ -0.98
SMARCAD1-203ENST00000394961 DDB1Q16531 1140 aa8.91□□□□□ -0.98
SMARCAD1-203ENST00000394961 TESK2Q96S53 571 aa8.91□□□□□ -0.98
SMARCAD1-203ENST00000394961 EP400Q96L91 3159 aa8.9□□□□□ -0.98
SMARCAD1-203ENST00000394961 KCNQ2O43526 872 aa8.9□□□□□ -0.98
SMARCAD1-203ENST00000394961 AXIN2Q9Y2T1 843 aa8.9□□□□□ -0.98
SMARCAD1-203ENST00000394961 SMG6Q86US8 1419 aaKnown RBP8.9□□□□□ -0.99
SMARCAD1-203ENST00000394961 MARCH10Q8NA82 808 aaPredicted RBP8.9□□□□□ -0.99
SMARCAD1-203ENST00000394961 STRN4Q9NRL3 753 aa8.9□□□□□ -0.99
SMARCAD1-203ENST00000394961 ADAMTS7Q9UKP4 1686 aa8.89□□□□□ -0.99
SMARCAD1-203ENST00000394961 TERF2IPQ9NYB0 399 aa8.89□□□□□ -0.99
SMARCAD1-203ENST00000394961 KIAA1551Q9HCM1 1747 aa8.89□□□□□ -0.99
SMARCAD1-203ENST00000394961 IP6K1Q92551 441 aa8.89□□□□□ -0.99
SMARCAD1-203ENST00000394961 SGIP1Q9BQI5 828 aa8.89□□□□□ -0.99
SMARCAD1-203ENST00000394961 HDGFL2Q7Z4V5 671 aaPredicted RBP8.88□□□□□ -0.99
SMARCAD1-203ENST00000394961 VIRMAQ69YN4 1812 aaKnown RBP8.88□□□□□ -0.99
SMARCAD1-203ENST00000394961 R3HDM1Q15032 1099 aaKnown RBP8.88□□□□□ -0.99
SMARCAD1-203ENST00000394961 SPON1Q9HCB6 807 aa8.87□□□□□ -0.99
SMARCAD1-203ENST00000394961 SLC27A3Q5K4L6 730 aa8.87□□□□□ -0.99
SMARCAD1-203ENST00000394961 C4BP0C0L5 1744 aa8.87□□□□□ -0.99
SMARCAD1-203ENST00000394961 TONSLQ96HA7 1378 aa8.87□□□□□ -0.99
SMARCAD1-203ENST00000394961 TOM1L2Q6ZVM7 507 aa8.87□□□□□ -0.99
SMARCAD1-203ENST00000394961 PROM2Q8N271 834 aa8.86□□□□□ -0.99
SMARCAD1-203ENST00000394961 SLC16A10Q8TF71 515 aa8.86□□□□□ -0.99
SMARCAD1-203ENST00000394961 INSRP06213 1382 aa8.86□□□□□ -0.99
SMARCAD1-203ENST00000394961 IL2RBP14784 551 aa8.86□□□□□ -0.99
SMARCAD1-203ENST00000394961 EXOC5O00471 708 aa8.85□□□□□ -0.99
SMARCAD1-203ENST00000394961 PTGER2P43116 358 aa8.85□□□□□ -0.99
SMARCAD1-203ENST00000394961 NUTM2GQ5VZR2 741 aa8.85□□□□□ -0.99
SMARCAD1-203ENST00000394961 SIN3AQ96ST3 1273 aa8.85□□□□□ -0.99
SMARCAD1-203ENST00000394961 BRCA1P38398 1863 aaKnown RBP8.84□□□□□ -0.99
SMARCAD1-203ENST00000394961 MEGF6O75095 1541 aa8.84□□□□□ -0.99
SMARCAD1-203ENST00000394961 A0A0G2JS52 829 aa8.84□□□□□ -0.99
SMARCAD1-203ENST00000394961 PSDA5PKW4 1024 aaPredicted RBP8.84□□□□□ -0.99
SMARCAD1-203ENST00000394961 MYT1Q01538 1121 aa8.84□□□□□ -0.99
SMARCAD1-203ENST00000394961 CARD11Q9BXL7 1154 aa8.84□□□□□ -0.99
SMARCAD1-203ENST00000394961 AKT1S1Q96B36 256 aa8.84□□□□□ -0.99
SMARCAD1-203ENST00000394961 SCN11AQ9UI33 1791 aa8.84□□□□□ -0.99
SMARCAD1-203ENST00000394961 NSD3Q9BZ95 1437 aa8.84□□□□□ -0.99
SMARCAD1-203ENST00000394961 SLC15A2Q16348 729 aa8.84□□□□□ -1
SMARCAD1-203ENST00000394961 MTFR1LQ9H019 292 aa8.84□□□□□ -1
SMARCAD1-203ENST00000394961 CDCA8Q53HL2 280 aa8.83□□□□□ -1
SMARCAD1-203ENST00000394961 TXNRD1Q16881 649 aa8.83□□□□□ -1
SMARCAD1-203ENST00000394961 ANKRD24Q8TF21 1146 aa8.83□□□□□ -1
SMARCAD1-203ENST00000394961 ANO8Q9HCE9 1232 aaPredicted RBP8.83□□□□□ -1
SMARCAD1-203ENST00000394961 FAM182BQ5T319 152 aa8.82□□□□□ -1
SMARCAD1-203ENST00000394961 STK32BQ9NY57 414 aa8.82□□□□□ -1
SMARCAD1-203ENST00000394961 FLT4P35916 1363 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms