RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
SPOCK1-202ENST00000394945 ME1P48163 572 aa18.45■□□□□ 0.54
SPOCK1-202ENST00000394945 RALYLQ86SE5 291 aaKnown RBP18.45■□□□□ 0.54
SPOCK1-202ENST00000394945 FILIP1LQ4L180 1135 aa18.45■□□□□ 0.54
SPOCK1-202ENST00000394945 TIGD1Q96MW7 591 aa18.45■□□□□ 0.54
SPOCK1-202ENST00000394945 POLR3GO15318 223 aaPredicted RBP18.45■□□□□ 0.54
SPOCK1-202ENST00000394945 OFD1O75665 1012 aa18.44■□□□□ 0.54
SPOCK1-202ENST00000394945 TMEM57Q8N5G2 664 aa18.44■□□□□ 0.54
SPOCK1-202ENST00000394945 PRKAR2BP31323 418 aa18.44■□□□□ 0.54
SPOCK1-202ENST00000394945 BRPF1P55201 1214 aaPredicted RBP18.44■□□□□ 0.54
SPOCK1-202ENST00000394945 ADCY5O95622 1261 aa18.43■□□□□ 0.54
SPOCK1-202ENST00000394945 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
SPOCK1-202ENST00000394945 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
SPOCK1-202ENST00000394945 ZKSCAN5Q9Y2L8 839 aa18.43■□□□□ 0.54
SPOCK1-202ENST00000394945 UPF3BQ9BZI7 483 aaKnown RBP18.43■□□□□ 0.54
SPOCK1-202ENST00000394945 GNAI2P04899 355 aa18.42■□□□□ 0.54
SPOCK1-202ENST00000394945 CAMK4Q16566 473 aa18.42■□□□□ 0.54
SPOCK1-202ENST00000394945 IGHDP01880 384 aa18.42■□□□□ 0.54
SPOCK1-202ENST00000394945 STK3Q13188 491 aa18.42■□□□□ 0.54
SPOCK1-202ENST00000394945 ZSCAN23Q3MJ62 389 aa18.42■□□□□ 0.54
SPOCK1-202ENST00000394945 RBM27Q9P2N5 1060 aaKnown RBP18.42■□□□□ 0.54
SPOCK1-202ENST00000394945 DUSP27Q5VZP5 1158 aa18.42■□□□□ 0.54
SPOCK1-202ENST00000394945 LRPPRCP42704 1394 aaKnown RBP18.41■□□□□ 0.54
SPOCK1-202ENST00000394945 C8orf34Q49A92 452 aa18.41■□□□□ 0.54
SPOCK1-202ENST00000394945 LRRCC1Q9C099 1032 aa18.41■□□□□ 0.54
SPOCK1-202ENST00000394945 FYCO1Q9BQS8 1478 aa18.41■□□□□ 0.54
SPOCK1-202ENST00000394945 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
SPOCK1-202ENST00000394945 SFPQP23246 707 aaKnown RBP eCLIP18.4■□□□□ 0.54
SPOCK1-202ENST00000394945 ANKRD1Q15327 319 aa18.4■□□□□ 0.54
SPOCK1-202ENST00000394945 GTPBP4Q9BZE4 634 aaKnown RBP18.4■□□□□ 0.54
SPOCK1-202ENST00000394945 DDX58O95786 925 aaKnown RBP18.4■□□□□ 0.54
SPOCK1-202ENST00000394945 PPFIBP1Q86W92 1011 aa18.4■□□□□ 0.54
SPOCK1-202ENST00000394945 PLCD4Q9BRC7 762 aa18.4■□□□□ 0.54
SPOCK1-202ENST00000394945 NOLC1Q14978 699 aaKnown RBP eCLIP18.39■□□□□ 0.54
SPOCK1-202ENST00000394945 FERMT3Q86UX7 667 aa18.39■□□□□ 0.54
SPOCK1-202ENST00000394945 NOL10Q9BSC4 688 aaKnown RBP18.39■□□□□ 0.54
SPOCK1-202ENST00000394945 CBFA2T2O43439 604 aa18.39■□□□□ 0.53
SPOCK1-202ENST00000394945 URI1O94763 535 aaPredicted RBP18.39■□□□□ 0.53
SPOCK1-202ENST00000394945 CCDC94Q9BW85 323 aaPredicted RBP18.39■□□□□ 0.53
SPOCK1-202ENST00000394945 ZSCAN31Q96LW9 406 aaPredicted RBP18.39■□□□□ 0.53
SPOCK1-202ENST00000394945 PPP6R1Q9UPN7 881 aa18.39■□□□□ 0.53
SPOCK1-202ENST00000394945 EID1Q9Y6B2 187 aa18.39■□□□□ 0.53
SPOCK1-202ENST00000394945 GDPD2Q9HCC8 539 aa18.39■□□□□ 0.53
SPOCK1-202ENST00000394945 CFAP45Q9UL16 551 aa18.39■□□□□ 0.53
SPOCK1-202ENST00000394945 ATP2B1P20020 1258 aa18.38■□□□□ 0.53
SPOCK1-202ENST00000394945 HIP1O00291 1037 aa18.38■□□□□ 0.53
SPOCK1-202ENST00000394945 CFAP70Q5T0N1 1121 aa18.38■□□□□ 0.53
SPOCK1-202ENST00000394945 KRT222Q8N1A0 295 aa18.38■□□□□ 0.53
SPOCK1-202ENST00000394945 CABP2Q9NPB3 220 aa18.38■□□□□ 0.53
SPOCK1-202ENST00000394945 TRMT1Q9NXH9 659 aaKnown RBP18.38■□□□□ 0.53
SPOCK1-202ENST00000394945 CLIP2Q9UDT6 1046 aa18.38■□□□□ 0.53
SPOCK1-202ENST00000394945 KIAA1107Q9UPP5 1409 aa18.38■□□□□ 0.53
SPOCK1-202ENST00000394945 FAM193AP78312 1265 aa18.38■□□□□ 0.53
SPOCK1-202ENST00000394945 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
SPOCK1-202ENST00000394945 LRSAM1Q6UWE0 723 aa18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 JMYQ8N9B5 988 aa18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 CENPHQ9H3R5 247 aa18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 C1orf141Q5JVX7 400 aa18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 ZNF830Q96NB3 372 aaPredicted RBP18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 PDRG1Q9NUG6 133 aa18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 BMS1Q14692 1282 aaKnown RBP18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 SLC12A5Q9H2X9 1139 aa18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 NKTRP30414 1462 aaKnown RBP18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 UVSSAQ2YD98 709 aa18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 NEUROD6Q96NK8 337 aa18.37■□□□□ 0.53
SPOCK1-202ENST00000394945 NCOA1Q15788 1441 aa18.36■□□□□ 0.53
SPOCK1-202ENST00000394945 RPAP2Q8IXW5 612 aaPredicted RBP18.36■□□□□ 0.53
SPOCK1-202ENST00000394945 SMAP1Q8IYB5 467 aaPredicted RBP18.36■□□□□ 0.53
SPOCK1-202ENST00000394945 GIMAP7Q8NHV1 300 aa18.36■□□□□ 0.53
SPOCK1-202ENST00000394945 JAKMIP1Q96N16 626 aaKnown RBP18.36■□□□□ 0.53
SPOCK1-202ENST00000394945 PDIA4P13667 645 aaKnown RBP18.36■□□□□ 0.53
SPOCK1-202ENST00000394945 BLOC1S2Q6QNY1 142 aa18.36■□□□□ 0.53
SPOCK1-202ENST00000394945 SLC4A2P04920 1241 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 WASHC4Q2M389 1173 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 IGSF3O75054 1194 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 HS1BP3Q53T59 392 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 VPS53Q5VIR6 699 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 SRCIN1Q9C0H9 1055 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 GBP3Q9H0R5 595 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 PLEKHH2Q8IVE3 1493 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 ERICH2A1L162 156 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 DHX16O60231 1041 aaKnown RBP18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 KDM4AO75164 1064 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 GPATCH11Q8N954 259 aa18.35■□□□□ 0.53
SPOCK1-202ENST00000394945 GOLGA6L10A6NI86 522 aa18.34■□□□□ 0.53
SPOCK1-202ENST00000394945 MAP4K4O95819 1239 aaPredicted RBP18.34■□□□□ 0.53
SPOCK1-202ENST00000394945 SSH1Q8WYL5 1049 aa18.34■□□□□ 0.53
SPOCK1-202ENST00000394945 ZNF428Q96B54 188 aa18.34■□□□□ 0.53
SPOCK1-202ENST00000394945 HCLS1P14317 486 aaPredicted RBP18.34■□□□□ 0.53
SPOCK1-202ENST00000394945 TMEM132EQ6IEE7 984 aa18.34■□□□□ 0.53
SPOCK1-202ENST00000394945 CFAP100Q494V2 611 aa18.34■□□□□ 0.53
SPOCK1-202ENST00000394945 DNAJC2Q99543 621 aaKnown RBP18.34■□□□□ 0.53
SPOCK1-202ENST00000394945 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
SPOCK1-202ENST00000394945 SMTNL1A8MU46 457 aa18.33■□□□□ 0.52
SPOCK1-202ENST00000394945 NEMFO60524 1076 aa18.33■□□□□ 0.52
SPOCK1-202ENST00000394945 CCDC30Q5VVM6 783 aa18.33■□□□□ 0.52
SPOCK1-202ENST00000394945 CKAP2LQ8IYA6 745 aa18.33■□□□□ 0.52
SPOCK1-202ENST00000394945 CRACR2AQ9BSW2 395 aa18.33■□□□□ 0.52
SPOCK1-202ENST00000394945 PAXBP1Q9Y5B6 917 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms