RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 MRPL50Q8N5N7 158 aaKnown RBP20.25■□□□□ 0.83
EFEMP1-202ENST00000394555 VAMP4O75379 141 aa20.24■□□□□ 0.83
EFEMP1-202ENST00000394555 CHD1O14646 1710 aa20.24■□□□□ 0.83
EFEMP1-202ENST00000394555 ADGRB1O14514 1584 aa20.24■□□□□ 0.83
EFEMP1-202ENST00000394555 ZGPATQ8N5A5 531 aaKnown RBP20.24■□□□□ 0.83
EFEMP1-202ENST00000394555 CHMP4BQ9H444 224 aaKnown RBP20.24■□□□□ 0.83
EFEMP1-202ENST00000394555 USP32Q8NFA0 1604 aa20.24■□□□□ 0.83
EFEMP1-202ENST00000394555 EFCAB6Q5THR3 1501 aa20.24■□□□□ 0.83
EFEMP1-202ENST00000394555 MINK1Q8N4C8 1332 aaPredicted RBP20.23■□□□□ 0.83
EFEMP1-202ENST00000394555 IBTKQ9P2D0 1353 aaPredicted RBP20.23■□□□□ 0.83
EFEMP1-202ENST00000394555 TULP4Q9NRJ4 1543 aa20.23■□□□□ 0.83
EFEMP1-202ENST00000394555 PLEKHM2Q8IWE5 1019 aa20.23■□□□□ 0.83
EFEMP1-202ENST00000394555 ZBTB7CA1YPR0 619 aa20.22■□□□□ 0.83
EFEMP1-202ENST00000394555 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
EFEMP1-202ENST00000394555 MROH1Q8NDA8 1641 aa20.22■□□□□ 0.83
EFEMP1-202ENST00000394555 PHACTR3Q96KR7 559 aa20.22■□□□□ 0.83
EFEMP1-202ENST00000394555 PPRC1Q5VV67 1664 aaKnown RBP20.21■□□□□ 0.83
EFEMP1-202ENST00000394555 TERF2IPQ9NYB0 399 aa20.21■□□□□ 0.83
EFEMP1-202ENST00000394555 NOL7Q9UMY1 257 aaKnown RBP20.21■□□□□ 0.83
EFEMP1-202ENST00000394555 ADGRB3O60242 1522 aa20.2■□□□□ 0.82
EFEMP1-202ENST00000394555 GPT2Q8TD30 523 aa20.2■□□□□ 0.82
EFEMP1-202ENST00000394555 OTUD7AQ8TE49 926 aaPredicted RBP20.2■□□□□ 0.82
EFEMP1-202ENST00000394555 USP26Q9BXU7 913 aa20.2■□□□□ 0.82
EFEMP1-202ENST00000394555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.2■□□□□ 0.82
EFEMP1-202ENST00000394555 UQCRHLA0A096LP55 91 aa20.19■□□□□ 0.82
EFEMP1-202ENST00000394555 FCHSD2O94868 740 aa20.19■□□□□ 0.82
EFEMP1-202ENST00000394555 UQCRHP07919 91 aa20.19■□□□□ 0.82
EFEMP1-202ENST00000394555 RNF214Q8ND24 703 aa20.19■□□□□ 0.82
EFEMP1-202ENST00000394555 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.19■□□□□ 0.82
EFEMP1-202ENST00000394555 COL3A1P02461 1466 aaPredicted RBP20.19■□□□□ 0.82
EFEMP1-202ENST00000394555 SYCE3A1L190 88 aa20.19■□□□□ 0.82
EFEMP1-202ENST00000394555 PUS7Q96PZ0 661 aaKnown RBP20.19■□□□□ 0.82
EFEMP1-202ENST00000394555 INO80Q9ULG1 1556 aaPredicted RBP20.18■□□□□ 0.82
EFEMP1-202ENST00000394555 TTC22Q5TAA0 569 aa20.18■□□□□ 0.82
EFEMP1-202ENST00000394555 MED14O60244 1454 aa20.18■□□□□ 0.82
EFEMP1-202ENST00000394555 VGFO15240 615 aaPredicted RBP20.18■□□□□ 0.82
EFEMP1-202ENST00000394555 TWISTNBQ3B726 338 aaPredicted RBP20.18■□□□□ 0.82
EFEMP1-202ENST00000394555 ARHGAP45Q92619 1136 aa20.17■□□□□ 0.82
EFEMP1-202ENST00000394555 ZNF428Q96B54 188 aa20.17■□□□□ 0.82
EFEMP1-202ENST00000394555 MBIPQ9NS73 344 aa20.17■□□□□ 0.82
EFEMP1-202ENST00000394555 NPATQ14207 1427 aa20.17■□□□□ 0.82
EFEMP1-202ENST00000394555 ST18O60284 1047 aa20.17■□□□□ 0.82
EFEMP1-202ENST00000394555 CYP2E1P05181 493 aaPredicted RBP20.17■□□□□ 0.82
EFEMP1-202ENST00000394555 SMARCA5O60264 1052 aaPredicted RBP20.16■□□□□ 0.82
EFEMP1-202ENST00000394555 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
EFEMP1-202ENST00000394555 NSFL1CQ9UNZ2 370 aaKnown RBP20.16■□□□□ 0.82
EFEMP1-202ENST00000394555 BRPF1P55201 1214 aaPredicted RBP20.16■□□□□ 0.82
EFEMP1-202ENST00000394555 HS1BP3Q53T59 392 aa20.16■□□□□ 0.82
EFEMP1-202ENST00000394555 C8orf58Q8NAV2 365 aa20.16■□□□□ 0.82
EFEMP1-202ENST00000394555 TMEM63CQ9P1W3 806 aa20.16■□□□□ 0.82
EFEMP1-202ENST00000394555 PDLIM2Q96JY6 352 aa20.15■□□□□ 0.82
EFEMP1-202ENST00000394555 ABCC4O15439 1325 aa20.15■□□□□ 0.82
EFEMP1-202ENST00000394555 RPGRIP1LQ68CZ1 1315 aa20.15■□□□□ 0.82
EFEMP1-202ENST00000394555 GLI2P10070 1586 aa20.15■□□□□ 0.82
EFEMP1-202ENST00000394555 ZNF500O60304 480 aaPredicted RBP20.15■□□□□ 0.82
EFEMP1-202ENST00000394555 NFE2L2Q16236 605 aa20.15■□□□□ 0.82
EFEMP1-202ENST00000394555 ZDHHC9Q9Y397 364 aa20.15■□□□□ 0.82
EFEMP1-202ENST00000394555 GNAI1P63096 354 aa20.14■□□□□ 0.82
EFEMP1-202ENST00000394555 ZKSCAN5Q9Y2L8 839 aa20.14■□□□□ 0.82
EFEMP1-202ENST00000394555 SDSP20132 328 aa20.14■□□□□ 0.81
EFEMP1-202ENST00000394555 HDGFL2Q7Z4V5 671 aaPredicted RBP20.14■□□□□ 0.81
EFEMP1-202ENST00000394555 PRAM1Q96QH2 718 aa20.14■□□□□ 0.81
EFEMP1-202ENST00000394555 CWC22Q9HCG8 908 aaKnown RBP20.14■□□□□ 0.81
EFEMP1-202ENST00000394555 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
EFEMP1-202ENST00000394555 PPLO60437 1756 aa20.13■□□□□ 0.81
EFEMP1-202ENST00000394555 CASC1Q6TDU7 716 aa20.13■□□□□ 0.81
EFEMP1-202ENST00000394555 DCTPP1Q9H773 170 aa20.13■□□□□ 0.81
EFEMP1-202ENST00000394555 TERF1P54274 439 aa20.13■□□□□ 0.81
EFEMP1-202ENST00000394555 FOXD4L6Q3SYB3 417 aaPredicted RBP20.13■□□□□ 0.81
EFEMP1-202ENST00000394555 FOXD4L3Q6VB84 417 aaPredicted RBP20.13■□□□□ 0.81
EFEMP1-202ENST00000394555 MPNDQ8N594 471 aa20.13■□□□□ 0.81
EFEMP1-202ENST00000394555 API5Q9BZZ5 524 aaKnown RBP20.12■□□□□ 0.81
EFEMP1-202ENST00000394555 PTMAP06454 111 aaKnown RBP20.12■□□□□ 0.81
EFEMP1-202ENST00000394555 LRSAM1Q6UWE0 723 aa20.12■□□□□ 0.81
EFEMP1-202ENST00000394555 PTCH1Q13635 1447 aa20.12■□□□□ 0.81
EFEMP1-202ENST00000394555 FAM83GA6ND36 823 aa20.11■□□□□ 0.81
EFEMP1-202ENST00000394555 DCTN1Q14203 1278 aa20.11■□□□□ 0.81
EFEMP1-202ENST00000394555 NOL8Q76FK4 1167 aaKnown RBP20.11■□□□□ 0.81
EFEMP1-202ENST00000394555 POLKQ9UBT6 870 aa20.11■□□□□ 0.81
EFEMP1-202ENST00000394555 PIK3R4Q99570 1358 aa20.1■□□□□ 0.81
EFEMP1-202ENST00000394555 IFT57Q9NWB7 429 aa20.1■□□□□ 0.81
EFEMP1-202ENST00000394555 LRRC7Q96NW7 1537 aa20.1■□□□□ 0.81
EFEMP1-202ENST00000394555 TPRNQ4KMQ1 711 aa20.09■□□□□ 0.81
EFEMP1-202ENST00000394555 CCDC39Q9UFE4 941 aa20.09■□□□□ 0.81
EFEMP1-202ENST00000394555 CFAP44Q96MT7 982 aa20.09■□□□□ 0.81
EFEMP1-202ENST00000394555 ARAP3Q8WWN8 1544 aa20.09■□□□□ 0.81
EFEMP1-202ENST00000394555 NEK4P51957 841 aa20.08■□□□□ 0.8
EFEMP1-202ENST00000394555 CSPP1Q1MSJ5 1256 aa20.08■□□□□ 0.8
EFEMP1-202ENST00000394555 MAP7D2Q96T17 732 aa20.08■□□□□ 0.8
EFEMP1-202ENST00000394555 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.8
EFEMP1-202ENST00000394555 EMILIN1Q9Y6C2 1016 aa20.08■□□□□ 0.8
EFEMP1-202ENST00000394555 ARHGEF28Q8N1W1 1705 aaKnown RBP20.08■□□□□ 0.8
EFEMP1-202ENST00000394555 CDK19Q9BWU1 502 aa20.07■□□□□ 0.8
EFEMP1-202ENST00000394555 UHRF1BP1LA0JNW5 1464 aa20.07■□□□□ 0.8
EFEMP1-202ENST00000394555 REC8O95072 547 aa20.07■□□□□ 0.8
EFEMP1-202ENST00000394555 DNTTIP2Q5QJE6 756 aaKnown RBP20.07■□□□□ 0.8
EFEMP1-202ENST00000394555 FAM135BQ49AJ0 1406 aa20.07■□□□□ 0.8
EFEMP1-202ENST00000394555 CAMSAP1Q5T5Y3 1602 aa20.06■□□□□ 0.8
EFEMP1-202ENST00000394555 KRT24Q2M2I5 525 aa20.06■□□□□ 0.8
EFEMP1-202ENST00000394555 ARHGAP31Q2M1Z3 1444 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms