RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PTMSP20962 102 aa20.02■□□□□ 0.79
PHTF1-205ENST00000393357 PLEKHF1Q96S99 279 aa20.02■□□□□ 0.79
PHTF1-205ENST00000393357 MAP4K4O95819 1239 aaPredicted RBP20.01■□□□□ 0.79
PHTF1-205ENST00000393357 USP26Q9BXU7 913 aa20.01■□□□□ 0.79
PHTF1-205ENST00000393357 SCAPERQ9BY12 1400 aa20.01■□□□□ 0.79
PHTF1-205ENST00000393357 EVC2Q86UK5 1308 aa20.01■□□□□ 0.79
PHTF1-205ENST00000393357 ANO2Q9NQ90 1003 aa20■□□□□ 0.79
PHTF1-205ENST00000393357 ZNF445P59923 1031 aa20■□□□□ 0.79
PHTF1-205ENST00000393357 NCOA3Q9Y6Q9 1424 aa19.99■□□□□ 0.79
PHTF1-205ENST00000393357 VAMP4O75379 141 aa19.99■□□□□ 0.79
PHTF1-205ENST00000393357 ATP10AO60312 1499 aa19.99■□□□□ 0.79
PHTF1-205ENST00000393357 FYB1O15117 783 aa19.99■□□□□ 0.79
PHTF1-205ENST00000393357 INTS3Q68E01 1043 aaKnown RBP19.99■□□□□ 0.79
PHTF1-205ENST00000393357 CASC1Q6TDU7 716 aa19.99■□□□□ 0.79
PHTF1-205ENST00000393357 DDX54Q8TDD1 881 aaKnown RBP19.99■□□□□ 0.79
PHTF1-205ENST00000393357 ZNF428Q96B54 188 aa19.99■□□□□ 0.79
PHTF1-205ENST00000393357 MBIPQ9NS73 344 aa19.99■□□□□ 0.79
PHTF1-205ENST00000393357 EXOC6BQ9Y2D4 811 aa19.99■□□□□ 0.79
PHTF1-205ENST00000393357 LRSAM1Q6UWE0 723 aa19.98■□□□□ 0.79
PHTF1-205ENST00000393357 CHD1O14646 1710 aa19.98■□□□□ 0.79
PHTF1-205ENST00000393357 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
PHTF1-205ENST00000393357 CCDC39Q9UFE4 941 aa19.98■□□□□ 0.79
PHTF1-205ENST00000393357 ZRANB1Q9UGI0 708 aa19.98■□□□□ 0.79
PHTF1-205ENST00000393357 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
PHTF1-205ENST00000393357 KIAA2012Q0VF49 1180 aa19.98■□□□□ 0.79
PHTF1-205ENST00000393357 CABP1Q9NZU7 370 aa19.98■□□□□ 0.79
PHTF1-205ENST00000393357 NUTM2FA1L443 756 aa19.97■□□□□ 0.79
PHTF1-205ENST00000393357 SHROOM2Q13796 1616 aa19.97■□□□□ 0.79
PHTF1-205ENST00000393357 F6X3S4 739 aa19.97■□□□□ 0.79
PHTF1-205ENST00000393357 MRPL50Q8N5N7 158 aaKnown RBP19.97■□□□□ 0.79
PHTF1-205ENST00000393357 HCLS1P14317 486 aaPredicted RBP19.97■□□□□ 0.79
PHTF1-205ENST00000393357 TTC22Q5TAA0 569 aa19.97■□□□□ 0.79
PHTF1-205ENST00000393357 SASS6Q6UVJ0 657 aa19.97■□□□□ 0.79
PHTF1-205ENST00000393357 RRS1Q15050 365 aaKnown RBP19.96■□□□□ 0.79
PHTF1-205ENST00000393357 PREX2Q70Z35 1606 aa19.96■□□□□ 0.79
PHTF1-205ENST00000393357 TMX3Q96JJ7 454 aa19.96■□□□□ 0.79
PHTF1-205ENST00000393357 TSPY26PQ9H489 355 aa19.96■□□□□ 0.79
PHTF1-205ENST00000393357 PPP4R3BQ5MIZ7 849 aa19.96■□□□□ 0.79
PHTF1-205ENST00000393357 MADDQ8WXG6 1647 aa19.95■□□□□ 0.78
PHTF1-205ENST00000393357 ZNF518AQ6AHZ1 1483 aa19.95■□□□□ 0.78
PHTF1-205ENST00000393357 KDM5AP29375 1690 aaKnown RBP19.95■□□□□ 0.78
PHTF1-205ENST00000393357 FIBPO43427 364 aa19.95■□□□□ 0.78
PHTF1-205ENST00000393357 MEIS3Q99687 375 aa19.95■□□□□ 0.78
PHTF1-205ENST00000393357 PALD1Q9ULE6 856 aa19.94■□□□□ 0.78
PHTF1-205ENST00000393357 PRAM1Q96QH2 718 aa19.94■□□□□ 0.78
PHTF1-205ENST00000393357 TTC37Q6PGP7 1564 aa19.94■□□□□ 0.78
PHTF1-205ENST00000393357 ZNF500O60304 480 aaPredicted RBP19.93■□□□□ 0.78
PHTF1-205ENST00000393357 CSPP1Q1MSJ5 1256 aa19.93■□□□□ 0.78
PHTF1-205ENST00000393357 MAST1Q9Y2H9 1570 aa19.92■□□□□ 0.78
PHTF1-205ENST00000393357 CT47B1P0C2W7 299 aaPredicted RBP19.92■□□□□ 0.78
PHTF1-205ENST00000393357 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.92■□□□□ 0.78
PHTF1-205ENST00000393357 MYOM1P52179 1685 aa19.91■□□□□ 0.78
PHTF1-205ENST00000393357 DYNC1I1O14576 645 aa19.91■□□□□ 0.78
PHTF1-205ENST00000393357 MCM10Q7L590 875 aa19.91■□□□□ 0.78
PHTF1-205ENST00000393357 A0A1W2PP64 1363 aa19.91■□□□□ 0.78
PHTF1-205ENST00000393357 ADCY5O95622 1261 aa19.91■□□□□ 0.78
PHTF1-205ENST00000393357 IQSEC2Q5JU85 1478 aa19.9■□□□□ 0.78
PHTF1-205ENST00000393357 PDLIM2Q96JY6 352 aa19.9■□□□□ 0.78
PHTF1-205ENST00000393357 DUOX2Q9NRD8 1548 aa19.9■□□□□ 0.78
PHTF1-205ENST00000393357 GIMAP6Q6P9H5 292 aa19.89■□□□□ 0.77
PHTF1-205ENST00000393357 USP48Q86UV5 1035 aa19.89■□□□□ 0.77
PHTF1-205ENST00000393357 ABCC11Q96J66 1382 aa19.89■□□□□ 0.77
PHTF1-205ENST00000393357 MAP7D2Q96T17 732 aa19.89■□□□□ 0.77
PHTF1-205ENST00000393357 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
PHTF1-205ENST00000393357 CPA1P15085 419 aa19.88■□□□□ 0.77
PHTF1-205ENST00000393357 NOLC1Q14978 699 aaKnown RBP eCLIP19.88■□□□□ 0.77
PHTF1-205ENST00000393357 ATP2B3Q16720 1220 aa19.88■□□□□ 0.77
PHTF1-205ENST00000393357 ALDH1L2Q3SY69 923 aa19.88■□□□□ 0.77
PHTF1-205ENST00000393357 TERF2IPQ9NYB0 399 aa19.88■□□□□ 0.77
PHTF1-205ENST00000393357 CNPY2Q9Y2B0 182 aa19.88■□□□□ 0.77
PHTF1-205ENST00000393357 REC8O95072 547 aa19.88■□□□□ 0.77
PHTF1-205ENST00000393357 IL1RAPL2Q9NP60 686 aa19.88■□□□□ 0.77
PHTF1-205ENST00000393357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.88■□□□□ 0.77
PHTF1-205ENST00000393357 ERC2O15083 957 aa19.87■□□□□ 0.77
PHTF1-205ENST00000393357 U2AF2P26368 475 aaKnown RBP eCLIP19.87■□□□□ 0.77
PHTF1-205ENST00000393357 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
PHTF1-205ENST00000393357 CLTCL1P53675 1640 aa19.87■□□□□ 0.77
PHTF1-205ENST00000393357 NCKAP5LQ9HCH0 1330 aa19.87■□□□□ 0.77
PHTF1-205ENST00000393357 STAG3Q9UJ98 1225 aa19.87■□□□□ 0.77
PHTF1-205ENST00000393357 HDGFL2Q7Z4V5 671 aaPredicted RBP19.86■□□□□ 0.77
PHTF1-205ENST00000393357 CYP2E1P05181 493 aaPredicted RBP19.85■□□□□ 0.77
PHTF1-205ENST00000393357 CWC22Q9HCG8 908 aaKnown RBP19.85■□□□□ 0.77
PHTF1-205ENST00000393357 IQGAP1P46940 1657 aa19.85■□□□□ 0.77
PHTF1-205ENST00000393357 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
PHTF1-205ENST00000393357 GNAI1P63096 354 aa19.85■□□□□ 0.77
PHTF1-205ENST00000393357 WAPLQ7Z5K2 1190 aa19.85■□□□□ 0.77
PHTF1-205ENST00000393357 ZNF592Q92610 1267 aa19.85■□□□□ 0.77
PHTF1-205ENST00000393357 NPHP1O15259 732 aa19.85■□□□□ 0.77
PHTF1-205ENST00000393357 SLC4A2P04920 1241 aa19.85■□□□□ 0.77
PHTF1-205ENST00000393357 CAMK4Q16566 473 aa19.85■□□□□ 0.77
PHTF1-205ENST00000393357 DRC7Q8IY82 874 aa19.85■□□□□ 0.77
PHTF1-205ENST00000393357 DCTPP1Q9H773 170 aa19.85■□□□□ 0.77
PHTF1-205ENST00000393357 PLXNC1O60486 1568 aa19.84■□□□□ 0.77
PHTF1-205ENST00000393357 NFE2L2Q16236 605 aa19.84■□□□□ 0.77
PHTF1-205ENST00000393357 AEBP1Q8IUX7 1158 aa19.84■□□□□ 0.77
PHTF1-205ENST00000393357 CCDC94Q9BW85 323 aaPredicted RBP19.84■□□□□ 0.77
PHTF1-205ENST00000393357 CEP152O94986 1710 aa19.84■□□□□ 0.77
PHTF1-205ENST00000393357 ZNF710Q8N1W2 664 aa19.84■□□□□ 0.77
PHTF1-205ENST00000393357 API5Q9BZZ5 524 aaKnown RBP19.84■□□□□ 0.77
PHTF1-205ENST00000393357 IQGAP3Q86VI3 1631 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms