RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 CLDN10P78369 228 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 ARHGAP4P98171 946 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 FKBP4Q02790 459 aaKnown RBP eCLIP2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 NCOA4Q13772 614 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 MRPL58Q14197 206 aaKnown RBP2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 TCEAL1Q15170 157 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 SDE2Q6IQ49 451 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 PPP1R18Q6NYC8 613 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 GLYCTKQ8IVS8 523 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 PLEKHM2Q8IWE5 1019 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZSCAN29Q8IWY8 852 aaPredicted RBP2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 SLC43A3Q8NBI5 491 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 NFATC2IPQ8NCF5 419 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 MICAL1Q8TDZ2 1067 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZNF594Q96JF6 807 aaPredicted RBP2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 ASB16Q96NS5 453 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 HINFPQ9BQA5 517 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 TUT1Q9H6E5 874 aaKnown RBP2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZSWIM4Q9H7M6 989 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 CUEDC1Q9NWM3 386 aaPredicted RBP2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 PARP2Q9UGN5 583 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 DCTN4Q9UJW0 460 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 SUGT1Q9Y2Z0 365 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 RIPOR2Q9Y4F9 1068 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 PPME1Q9Y570 386 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 UNC13AQ9UPW8 1703 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 ZBBXA8MT70 800 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 ATP5J2-PTCD1G3V325 749 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 TPD52L2O43399 206 aaKnown RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 CLSTN1O94985 981 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 PARNO95453 639 aaKnown RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 FMNL1O95466 1100 aaPredicted RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 P4HBP07237 508 aaKnown RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 DNAJA1P31689 397 aaKnown RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 USP46P62068 366 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 IRX6P78412 446 aaPredicted RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 XPCQ01831 940 aaPredicted RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 OCLNQ16625 522 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 PTPROQ16827 1216 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 CC2D2BQ6DHV5 1058 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 PLPP7Q8NBV4 271 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 C1orf216Q8TAB5 229 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 TMC1Q8TDI8 760 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 RNF34Q969K3 372 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 JPH4Q96JJ6 628 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 PURBQ96QR8 312 aaKnown RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 SETDB2Q96T68 719 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 DUSP9Q99956 384 aaKnown RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 MKNK1Q9BUB5 465 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 TMEM134Q9H6X4 195 aa2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 DNAAF2Q9NVR5 837 aaKnown RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 COLQQ9Y215 455 aaPredicted RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 TMA7Q9Y2S6 64 aaKnown RBP2.15□□□□□ -2.07
RNU1-78P-201ENST00000391248 ABCC9O60706 1549 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 ATMINO43313 823 aaPredicted RBP2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 PEX14O75381 377 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 PLCG2P16885 1265 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 RACK1P63244 317 aaKnown RBP2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 BMS1Q14692 1282 aaKnown RBP2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 ARSIQ5FYB1 569 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 CCDC102BQ68D86 513 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 LYPD8Q6UX82 237 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 TMC7Q7Z402 723 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 PACS2Q86VP3 889 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 TICAM2Q86XR7 235 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 RNF135Q8IUD6 432 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 NLGN1Q8N2Q7 840 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 TINF2Q9BSI4 451 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 TGIF2Q9GZN2 237 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 NEUROD4Q9HD90 331 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 CCDC87Q9NVE4 849 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 IFT57Q9NWB7 429 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 CXXC1Q9P0U4 656 aaPredicted RBP2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 EGFL7Q9UHF1 273 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 G3BP2Q9UN86 482 aaKnown RBP2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 KIAA1024Q9UPX6 916 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 PCDHB9Q9Y5E1 797 aa2.14□□□□□ -2.07
RNU1-78P-201ENST00000391248 hCG_2014768A0A024R1R8 64 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 PLEKHD1A6NEE1 506 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 C21orf2O43822 256 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 LDHBP07195 334 aaKnown RBP2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 NUDT7P0C024 238 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 IBSPP21815 317 aaPredicted RBP2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 MAPK8P45983 427 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 SEC13P55735 322 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 ANAPC15P60006 121 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 DAB2P98082 770 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 FANCCQ00597 558 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 FUT2Q10981 343 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 AAMPQ13685 434 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 COL19A1Q14993 1142 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 SWI5Q1ZZU3 235 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 EML3Q32P44 896 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 SWT1Q5T5J6 900 aaKnown RBP2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 ZNF746Q6NUN9 644 aaPredicted RBP2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 TRAF7Q6Q0C0 670 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 GMLQ99445 158 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 MYH16Q9H6N6 1097 aa2.13□□□□□ -2.07
RNU1-78P-201ENST00000391248 CCSER2Q9H7U1 834 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms