RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 KCTD15Q96SI1 283 aaPredicted RBP7.87□□□□□ -1.15
SNORA40.3-201ENST00000390964 AAASQ9NRG9 546 aa7.87□□□□□ -1.15
SNORA40.3-201ENST00000390964 RAD21O60216 631 aa7.86□□□□□ -1.15
SNORA40.3-201ENST00000390964 UBTFP17480 764 aaKnown RBP7.86□□□□□ -1.15
SNORA40.3-201ENST00000390964 FSHRP23945 695 aa7.86□□□□□ -1.15
SNORA40.3-201ENST00000390964 WASHC4Q2M389 1173 aa7.86□□□□□ -1.15
SNORA40.3-201ENST00000390964 ZNF775Q96BV0 537 aaPredicted RBP7.86□□□□□ -1.15
SNORA40.3-201ENST00000390964 NR3C2P08235 984 aa7.85□□□□□ -1.15
SNORA40.3-201ENST00000390964 ABL2P42684 1182 aa7.85□□□□□ -1.15
SNORA40.3-201ENST00000390964 CCDC116Q8IYX3 515 aa7.85□□□□□ -1.15
SNORA40.3-201ENST00000390964 KLF16Q9BXK1 252 aaPredicted RBP7.85□□□□□ -1.15
SNORA40.3-201ENST00000390964 PCDHB9Q9Y5E1 797 aa7.85□□□□□ -1.15
SNORA40.3-201ENST00000390964 DHX9Q08211 1270 aaKnown RBP7.84□□□□□ -1.15
SNORA40.3-201ENST00000390964 SEPT12Q8IYM1 358 aa7.84□□□□□ -1.15
SNORA40.3-201ENST00000390964 ESPNB1AK53 854 aa7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 ST8SIA5O15466 376 aa7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 CAPN5O15484 640 aaPredicted RBP7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 TIMP2P16035 220 aa7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 WDR4P57081 412 aaKnown RBP7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 EIF4G2P78344 907 aaKnown RBP eCLIP7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 INTS6LQ5JSJ4 861 aaKnown RBP7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 CCDC125Q86Z20 511 aa7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 WWC1Q8IX03 1113 aa7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 POM121Q96HA1 1249 aa7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 EMILIN1Q9Y6C2 1016 aa7.83□□□□□ -1.16
SNORA40.3-201ENST00000390964 ZIC2O95409 532 aaPredicted RBP7.81□□□□□ -1.16
SNORA40.3-201ENST00000390964 VAC14Q08AM6 782 aa7.81□□□□□ -1.16
SNORA40.3-201ENST00000390964 PPP1R26Q5T8A7 1209 aaPredicted RBP7.81□□□□□ -1.16
SNORA40.3-201ENST00000390964 ITPKCQ96DU7 683 aa7.81□□□□□ -1.16
SNORA40.3-201ENST00000390964 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
SNORA40.3-201ENST00000390964 SOX11P35716 441 aa7.8□□□□□ -1.16
SNORA40.3-201ENST00000390964 RNF20Q5VTR2 975 aa7.8□□□□□ -1.16
SNORA40.3-201ENST00000390964 TRIM52Q96A61 297 aa7.8□□□□□ -1.16
SNORA40.3-201ENST00000390964 GIGYF1O75420 1035 aaPredicted RBP7.79□□□□□ -1.16
SNORA40.3-201ENST00000390964 ZFAND3Q9H8U3 227 aa7.79□□□□□ -1.16
SNORA40.3-201ENST00000390964 CEP126Q9P2H0 1117 aa7.79□□□□□ -1.16
SNORA40.3-201ENST00000390964 DACH1Q9UI36 760 aa7.79□□□□□ -1.16
SNORA40.3-201ENST00000390964 ATP13A2Q9NQ11 1180 aa7.78□□□□□ -1.16
SNORA40.3-201ENST00000390964 GTF3C3Q9Y5Q9 886 aa7.78□□□□□ -1.16
SNORA40.3-201ENST00000390964 A6NJR5 290 aa7.77□□□□□ -1.17
SNORA40.3-201ENST00000390964 ERVH48-1M5A8F1 160 aa7.77□□□□□ -1.17
SNORA40.3-201ENST00000390964 CLUAP1Q96AJ1 413 aa7.77□□□□□ -1.17
SNORA40.3-201ENST00000390964 RAB15P59190 212 aa7.76□□□□□ -1.17
SNORA40.3-201ENST00000390964 Q6ZVU0 165 aa7.76□□□□□ -1.17
SNORA40.3-201ENST00000390964 MEIOBQ8N635 442 aa7.76□□□□□ -1.17
SNORA40.3-201ENST00000390964 SEMA3FQ13275 785 aa7.75□□□□□ -1.17
SNORA40.3-201ENST00000390964 MRPL14Q6P1L8 145 aaKnown RBP7.75□□□□□ -1.17
SNORA40.3-201ENST00000390964 TRIM46Q7Z4K8 759 aa7.75□□□□□ -1.17
SNORA40.3-201ENST00000390964 PROSER2Q86WR7 435 aaPredicted RBP7.75□□□□□ -1.17
SNORA40.3-201ENST00000390964 FNBP4Q8N3X1 1017 aaPredicted RBP7.75□□□□□ -1.17
SNORA40.3-201ENST00000390964 SENP2Q9HC62 589 aa7.75□□□□□ -1.17
SNORA40.3-201ENST00000390964 TMPRSS4Q9NRS4 437 aa7.75□□□□□ -1.17
SNORA40.3-201ENST00000390964 PHTF2Q8N3S3 785 aa7.74□□□□□ -1.17
SNORA40.3-201ENST00000390964 ZNF784Q8NCA9 323 aaPredicted RBP7.74□□□□□ -1.17
SNORA40.3-201ENST00000390964 KIFC2Q96AC6 838 aa7.74□□□□□ -1.17
SNORA40.3-201ENST00000390964 ALG2Q9H553 416 aa7.74□□□□□ -1.17
SNORA40.3-201ENST00000390964 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
SNORA40.3-201ENST00000390964 LILRA1O75019 489 aa7.73□□□□□ -1.17
SNORA40.3-201ENST00000390964 UPP2O95045 317 aa7.73□□□□□ -1.17
SNORA40.3-201ENST00000390964 BMP1P13497 986 aa7.73□□□□□ -1.17
SNORA40.3-201ENST00000390964 SCARF1Q14162 830 aa7.73□□□□□ -1.17
SNORA40.3-201ENST00000390964 SLFNL1Q499Z3 407 aa7.73□□□□□ -1.17
SNORA40.3-201ENST00000390964 TSEN34Q9BSV6 310 aaKnown RBP7.73□□□□□ -1.17
SNORA40.3-201ENST00000390964 CBLBQ13191 982 aa7.72□□□□□ -1.17
SNORA40.3-201ENST00000390964 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
SNORA40.3-201ENST00000390964 TRIM47Q96LD4 638 aa7.72□□□□□ -1.17
SNORA40.3-201ENST00000390964 CHIC2Q9UKJ5 165 aa7.72□□□□□ -1.17
SNORA40.3-201ENST00000390964 POTECB2RU33 542 aa7.71□□□□□ -1.18
SNORA40.3-201ENST00000390964 C11orf95C9JLR9 678 aaPredicted RBP7.71□□□□□ -1.18
SNORA40.3-201ENST00000390964 ERVK-9P63128 1117 aa7.71□□□□□ -1.18
SNORA40.3-201ENST00000390964 CC2D2BQ6DHV5 1058 aa7.71□□□□□ -1.18
SNORA40.3-201ENST00000390964 ZFP42Q96MM3 310 aa7.71□□□□□ -1.18
SNORA40.3-201ENST00000390964 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.18
SNORA40.3-201ENST00000390964 POM121CA8CG34 1229 aa7.7□□□□□ -1.18
SNORA40.3-201ENST00000390964 ADH1AP07327 375 aa7.7□□□□□ -1.18
SNORA40.3-201ENST00000390964 ADD1P35611 737 aaKnown RBP7.7□□□□□ -1.18
SNORA40.3-201ENST00000390964 RNF135Q8IUD6 432 aa7.7□□□□□ -1.18
SNORA40.3-201ENST00000390964 CCDC85AQ96PX6 553 aaPredicted RBP7.7□□□□□ -1.18
SNORA40.3-201ENST00000390964 PURBQ96QR8 312 aaKnown RBP7.7□□□□□ -1.18
SNORA40.3-201ENST00000390964 CYLDQ9NQC7 956 aa7.7□□□□□ -1.18
SNORA40.3-201ENST00000390964 MAP7D1Q3KQU3 841 aa7.69□□□□□ -1.18
SNORA40.3-201ENST00000390964 BMP2P12643 396 aa7.68□□□□□ -1.18
SNORA40.3-201ENST00000390964 ADAMTS19Q8TE59 1207 aa7.68□□□□□ -1.18
SNORA40.3-201ENST00000390964 SPINT1O43278 529 aa7.67□□□□□ -1.18
SNORA40.3-201ENST00000390964 TRAK2O60296 914 aa7.67□□□□□ -1.18
SNORA40.3-201ENST00000390964 USP4Q13107 963 aa7.67□□□□□ -1.18
SNORA40.3-201ENST00000390964 C6orf118Q5T5N4 469 aa7.67□□□□□ -1.18
SNORA40.3-201ENST00000390964 HDGFL1Q5TGJ6 251 aa7.67□□□□□ -1.18
SNORA40.3-201ENST00000390964 TREML4Q6UXN2 200 aa7.67□□□□□ -1.18
SNORA40.3-201ENST00000390964 KDF1Q8NAX2 398 aaPredicted RBP7.67□□□□□ -1.18
SNORA40.3-201ENST00000390964 NFATC2IPQ8NCF5 419 aa7.67□□□□□ -1.18
SNORA40.3-201ENST00000390964 CDCA7Q9BWT1 371 aaPredicted RBP7.67□□□□□ -1.18
SNORA40.3-201ENST00000390964 DOLKQ9UPQ8 538 aa7.67□□□□□ -1.18
SNORA40.3-201ENST00000390964 MYCP01106 439 aaPredicted RBP7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 SNRPBP14678 240 aaKnown RBP7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 PTGIRP43119 386 aa7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 SCTRP47872 440 aa7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 TSGA10IPQ3SY00 556 aa7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 PLPP7Q8NBV4 271 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms