RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 NSD3Q9BZ95 1437 aa30.53■■■□□ 2.48
IGHV3-20-201ENST00000390606 FAM98CQ17RN3 349 aaKnown RBP30.52■■■□□ 2.48
IGHV3-20-201ENST00000390606 GGNBP2Q9H3C7 697 aa30.51■■■□□ 2.47
IGHV3-20-201ENST00000390606 ABCC6O95255 1503 aa30.49■■■□□ 2.47
IGHV3-20-201ENST00000390606 KIF7Q2M1P5 1343 aa30.47■■■□□ 2.47
IGHV3-20-201ENST00000390606 UPF1Q92900 1129 aaKnown RBP eCLIP30.47■■■□□ 2.47
IGHV3-20-201ENST00000390606 PANK3Q9H999 370 aa30.45■■■□□ 2.47
IGHV3-20-201ENST00000390606 USP35Q9P2H5 1018 aa30.45■■■□□ 2.47
IGHV3-20-201ENST00000390606 CRB1P82279 1406 aa30.45■■■□□ 2.46
IGHV3-20-201ENST00000390606 THSD7AQ9UPZ6 1657 aa30.45■■■□□ 2.46
IGHV3-20-201ENST00000390606 BRWD3Q6RI45 1802 aa30.45■■■□□ 2.46
IGHV3-20-201ENST00000390606 KIF20BQ96Q89 1820 aa30.45■■■□□ 2.46
IGHV3-20-201ENST00000390606 LTN1O94822 1766 aa30.44■■■□□ 2.46
IGHV3-20-201ENST00000390606 RGPD5Q99666 1765 aa30.44■■■□□ 2.46
IGHV3-20-201ENST00000390606 FBLN1P23142 703 aa30.44■■■□□ 2.46
IGHV3-20-201ENST00000390606 BARGINQ6ZT62 677 aa30.44■■■□□ 2.46
IGHV3-20-201ENST00000390606 TCP11L2Q8N4U5 519 aa30.44■■■□□ 2.46
IGHV3-20-201ENST00000390606 WDR17Q8IZU2 1322 aa30.44■■■□□ 2.46
IGHV3-20-201ENST00000390606 A0A0G2JS52 829 aa30.41■■■□□ 2.46
IGHV3-20-201ENST00000390606 MYT1Q01538 1121 aa30.41■■■□□ 2.46
IGHV3-20-201ENST00000390606 MAP3K19Q56UN5 1328 aa30.41■■■□□ 2.46
IGHV3-20-201ENST00000390606 TOM1L2Q6ZVM7 507 aa30.4■■■□□ 2.46
IGHV3-20-201ENST00000390606 THRAP3Q9Y2W1 955 aaKnown RBP30.4■■■□□ 2.46
IGHV3-20-201ENST00000390606 CGNL1Q0VF96 1302 aa30.4■■■□□ 2.46
IGHV3-20-201ENST00000390606 KRT27Q7Z3Y8 459 aa30.39■■■□□ 2.46
IGHV3-20-201ENST00000390606 IP6K1Q92551 441 aa30.38■■■□□ 2.45
IGHV3-20-201ENST00000390606 ERBB3P21860 1342 aa30.37■■■□□ 2.45
IGHV3-20-201ENST00000390606 CSB-PGBD3P0DP91 1061 aa30.36■■■□□ 2.45
IGHV3-20-201ENST00000390606 BLMP54132 1417 aaPredicted RBP30.36■■■□□ 2.45
IGHV3-20-201ENST00000390606 RRS1Q15050 365 aaKnown RBP30.35■■■□□ 2.45
IGHV3-20-201ENST00000390606 CARD10Q9BWT7 1032 aa30.35■■■□□ 2.45
IGHV3-20-201ENST00000390606 CCDC7Q96M83 1385 aa30.35■■■□□ 2.45
IGHV3-20-201ENST00000390606 WASHC2AQ641Q2 1341 aa30.33■■■□□ 2.45
IGHV3-20-201ENST00000390606 HOXC9P31274 260 aa30.33■■■□□ 2.45
IGHV3-20-201ENST00000390606 AMPHP49418 695 aa30.32■■■□□ 2.44
IGHV3-20-201ENST00000390606 ANKRD24Q8TF21 1146 aa30.32■■■□□ 2.44
IGHV3-20-201ENST00000390606 RTL1A6NKG5 1358 aa30.3■■■□□ 2.44
IGHV3-20-201ENST00000390606 DISP2A7MBM2 1401 aa30.27■■■□□ 2.44
IGHV3-20-201ENST00000390606 PARP4Q9UKK3 1724 aaKnown RBP30.27■■■□□ 2.44
IGHV3-20-201ENST00000390606 FAM182BQ5T319 152 aa30.26■■■□□ 2.43
IGHV3-20-201ENST00000390606 NLRP2Q9NX02 1062 aa30.26■■■□□ 2.43
IGHV3-20-201ENST00000390606 ANKRD26Q9UPS8 1709 aa30.26■■■□□ 2.43
IGHV3-20-201ENST00000390606 NSD2O96028 1365 aa30.26■■■□□ 2.43
IGHV3-20-201ENST00000390606 KIF24Q5T7B8 1368 aa30.26■■■□□ 2.43
IGHV3-20-201ENST00000390606 PEAK1Q9H792 1746 aa30.25■■■□□ 2.43
IGHV3-20-201ENST00000390606 KNSTRNQ9Y448 316 aa30.25■■■□□ 2.43
IGHV3-20-201ENST00000390606 EP400Q96L91 3159 aa30.25■■■□□ 2.43
IGHV3-20-201ENST00000390606 LTV1Q96GA3 475 aaPredicted RBP30.24■■■□□ 2.43
IGHV3-20-201ENST00000390606 EMILIN1Q9Y6C2 1016 aa30.24■■■□□ 2.43
IGHV3-20-201ENST00000390606 WNK3Q9BYP7 1800 aa30.24■■■□□ 2.43
IGHV3-20-201ENST00000390606 PER1O15534 1290 aaPredicted RBP30.23■■■□□ 2.43
IGHV3-20-201ENST00000390606 CDCA7Q9BWT1 371 aaPredicted RBP30.23■■■□□ 2.43
IGHV3-20-201ENST00000390606 PDE3BQ13370 1112 aa30.22■■■□□ 2.43
IGHV3-20-201ENST00000390606 AMER1Q5JTC6 1135 aaPredicted RBP30.22■■■□□ 2.43
IGHV3-20-201ENST00000390606 CCDC125Q86Z20 511 aa30.22■■■□□ 2.43
IGHV3-20-201ENST00000390606 FLT4P35916 1363 aa30.22■■■□□ 2.43
IGHV3-20-201ENST00000390606 LRRC37A3O60309 1634 aa30.22■■■□□ 2.43
IGHV3-20-201ENST00000390606 INSRP06213 1382 aa30.21■■■□□ 2.43
IGHV3-20-201ENST00000390606 HSP90AB2PQ58FF8 381 aa30.21■■■□□ 2.43
IGHV3-20-201ENST00000390606 POLKQ9UBT6 870 aa30.2■■■□□ 2.43
IGHV3-20-201ENST00000390606 FAM208AQ9UK61 1670 aaKnown RBP30.19■■■□□ 2.42
IGHV3-20-201ENST00000390606 DDB1Q16531 1140 aa30.18■■■□□ 2.42
IGHV3-20-201ENST00000390606 TNNT2P45379 298 aaPredicted RBP30.17■■■□□ 2.42
IGHV3-20-201ENST00000390606 FAM196AQ6ZSG2 479 aa30.16■■■□□ 2.42
IGHV3-20-201ENST00000390606 MAP2P11137 1827 aaKnown RBP30.16■■■□□ 2.42
IGHV3-20-201ENST00000390606 MORC1Q86VD1 984 aa30.15■■■□□ 2.42
IGHV3-20-201ENST00000390606 IL2RBP14784 551 aa30.14■■■□□ 2.42
IGHV3-20-201ENST00000390606 PPM1GO15355 546 aaPredicted RBP30.13■■■□□ 2.41
IGHV3-20-201ENST00000390606 NBPF6Q5VWK0 638 aa30.13■■■□□ 2.41
IGHV3-20-201ENST00000390606 NBPF4Q96M43 638 aa30.13■■■□□ 2.41
IGHV3-20-201ENST00000390606 RGPD2P0DJD1 1756 aa30.13■■■□□ 2.41
IGHV3-20-201ENST00000390606 SMG6Q86US8 1419 aaKnown RBP30.12■■■□□ 2.41
IGHV3-20-201ENST00000390606 MARCH10Q8NA82 808 aaPredicted RBP30.11■■■□□ 2.41
IGHV3-20-201ENST00000390606 TNS2Q63HR2 1409 aa30.11■■■□□ 2.41
IGHV3-20-201ENST00000390606 EXOC5O00471 708 aa30.1■■■□□ 2.41
IGHV3-20-201ENST00000390606 OVOS2A0A0G2JMS6 1433 aa30.09■■■□□ 2.41
IGHV3-20-201ENST00000390606 NPC1L1Q9UHC9 1359 aa30.08■■■□□ 2.41
IGHV3-20-201ENST00000390606 SF3B2Q13435 895 aaKnown RBP30.07■■■□□ 2.4
IGHV3-20-201ENST00000390606 DEFB132Q7Z7B7 95 aa30.07■■■□□ 2.4
IGHV3-20-201ENST00000390606 TRIM37O94972 964 aa30.06■■■□□ 2.4
IGHV3-20-201ENST00000390606 USHBP1Q8N6Y0 703 aa30.06■■■□□ 2.4
IGHV3-20-201ENST00000390606 CC2D1BQ5T0F9 858 aaKnown RBP30.05■■■□□ 2.4
IGHV3-20-201ENST00000390606 RGPD1P0DJD0 1748 aa30.05■■■□□ 2.4
IGHV3-20-201ENST00000390606 BCL9O00512 1426 aa30.05■■■□□ 2.4
IGHV3-20-201ENST00000390606 ZEB1P37275 1124 aaPredicted RBP30.04■■■□□ 2.4
IGHV3-20-201ENST00000390606 MEGF6O75095 1541 aa30.04■■■□□ 2.4
IGHV3-20-201ENST00000390606 TNS1Q9HBL0 1735 aaKnown RBP30.03■■■□□ 2.4
IGHV3-20-201ENST00000390606 NCAPD2Q15021 1401 aa30.02■■■□□ 2.4
IGHV3-20-201ENST00000390606 EIF4A2Q14240 407 aaKnown RBP30.01■■■□□ 2.39
IGHV3-20-201ENST00000390606 BAG6P46379 1132 aa29.99■■■□□ 2.39
IGHV3-20-201ENST00000390606 EYA1Q99502 592 aa29.99■■■□□ 2.39
IGHV3-20-201ENST00000390606 SBF2Q86WG5 1849 aa29.96■■■□□ 2.39
IGHV3-20-201ENST00000390606 RAPGEF4Q8WZA2 1011 aa29.96■■■□□ 2.39
IGHV3-20-201ENST00000390606 EN1Q05925 392 aaPredicted RBP29.95■■■□□ 2.39
IGHV3-20-201ENST00000390606 ZCRB1Q8TBF4 217 aaKnown RBP29.95■■■□□ 2.39
IGHV3-20-201ENST00000390606 APBA3O96018 575 aa29.94■■■□□ 2.38
IGHV3-20-201ENST00000390606 PTF1AQ7RTS3 328 aa29.94■■■□□ 2.38
IGHV3-20-201ENST00000390606 TATP17735 454 aaPredicted RBP29.93■■■□□ 2.38
IGHV3-20-201ENST00000390606 MTHFSP49914 203 aa29.93■■■□□ 2.38
IGHV3-20-201ENST00000390606 CNGB1Q14028 1251 aaPredicted RBP29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms