RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SLFN5Q08AF3 891 aa16.02■□□□□ 0.16
SPTBN1-203ENST00000389980 DUSP27Q5VZP5 1158 aa16.02■□□□□ 0.16
SPTBN1-203ENST00000389980 AEBP1Q8IUX7 1158 aa16.02■□□□□ 0.16
SPTBN1-203ENST00000389980 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.16
SPTBN1-203ENST00000389980 SLAIN2Q9P270 581 aa16.02■□□□□ 0.16
SPTBN1-203ENST00000389980 HOXC9P31274 260 aa16.02■□□□□ 0.15
SPTBN1-203ENST00000389980 NGEFQ8N5V2 710 aa16.02■□□□□ 0.15
SPTBN1-203ENST00000389980 NFAT5O94916 1531 aa16.01■□□□□ 0.15
SPTBN1-203ENST00000389980 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
SPTBN1-203ENST00000389980 NPHP3Q7Z494 1330 aa16■□□□□ 0.15
SPTBN1-203ENST00000389980 ALS2Q96Q42 1657 aa16■□□□□ 0.15
SPTBN1-203ENST00000389980 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
SPTBN1-203ENST00000389980 PNNQ9H307 717 aaKnown RBP16■□□□□ 0.15
SPTBN1-203ENST00000389980 GCP02774 474 aa15.99■□□□□ 0.15
SPTBN1-203ENST00000389980 RIPK4P57078 832 aa15.99■□□□□ 0.15
SPTBN1-203ENST00000389980 LTV1Q96GA3 475 aaPredicted RBP15.99■□□□□ 0.15
SPTBN1-203ENST00000389980 RCAN3Q9UKA8 241 aa15.99■□□□□ 0.15
SPTBN1-203ENST00000389980 TRIM35Q9UPQ4 493 aa15.99■□□□□ 0.15
SPTBN1-203ENST00000389980 TRMT2AQ8IZ69 625 aaKnown RBP15.98■□□□□ 0.15
SPTBN1-203ENST00000389980 KCNH5Q8NCM2 988 aa15.98■□□□□ 0.15
SPTBN1-203ENST00000389980 RGPD1P0DJD0 1748 aa15.98■□□□□ 0.15
SPTBN1-203ENST00000389980 PXDNQ92626 1479 aa15.98■□□□□ 0.15
SPTBN1-203ENST00000389980 CCDC27Q2M243 656 aa15.97■□□□□ 0.15
SPTBN1-203ENST00000389980 USP19O94966 1318 aa15.97■□□□□ 0.15
SPTBN1-203ENST00000389980 E9PSI1 815 aa15.97■□□□□ 0.15
SPTBN1-203ENST00000389980 NEFMP07197 916 aa15.97■□□□□ 0.15
SPTBN1-203ENST00000389980 EYA1Q99502 592 aa15.97■□□□□ 0.15
SPTBN1-203ENST00000389980 SLIT3O75094 1523 aa15.97■□□□□ 0.15
SPTBN1-203ENST00000389980 CABLES1Q8TDN4 633 aa15.96■□□□□ 0.15
SPTBN1-203ENST00000389980 MED1Q15648 1581 aaPredicted RBP15.95■□□□□ 0.14
SPTBN1-203ENST00000389980 WDR63Q8IWG1 891 aa15.95■□□□□ 0.14
SPTBN1-203ENST00000389980 IP6K1Q92551 441 aa15.95■□□□□ 0.14
SPTBN1-203ENST00000389980 DLG5Q8TDM6 1919 aa15.95■□□□□ 0.14
SPTBN1-203ENST00000389980 KIF24Q5T7B8 1368 aa15.95■□□□□ 0.14
SPTBN1-203ENST00000389980 NFE2L2Q16236 605 aa15.94■□□□□ 0.14
SPTBN1-203ENST00000389980 TNS3Q68CZ2 1445 aa15.94■□□□□ 0.14
SPTBN1-203ENST00000389980 ARHGEF25Q86VW2 580 aa15.94■□□□□ 0.14
SPTBN1-203ENST00000389980 SPATA31A3Q5VYP0 1347 aa15.94■□□□□ 0.14
SPTBN1-203ENST00000389980 RNF123Q5XPI4 1314 aa15.94■□□□□ 0.14
SPTBN1-203ENST00000389980 ZC3H6P61129 1189 aaKnown RBP15.94■□□□□ 0.14
SPTBN1-203ENST00000389980 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
SPTBN1-203ENST00000389980 RTL1A6NKG5 1358 aa15.93■□□□□ 0.14
SPTBN1-203ENST00000389980 ARHGEF10O15013 1369 aa15.93■□□□□ 0.14
SPTBN1-203ENST00000389980 IGSF1Q8N6C5 1336 aa15.93■□□□□ 0.14
SPTBN1-203ENST00000389980 USHBP1Q8N6Y0 703 aa15.93■□□□□ 0.14
SPTBN1-203ENST00000389980 LTBP4Q8N2S1 1624 aa15.92■□□□□ 0.14
SPTBN1-203ENST00000389980 THUMPD2Q9BTF0 503 aaKnown RBP15.92■□□□□ 0.14
SPTBN1-203ENST00000389980 RGPD2P0DJD1 1756 aa15.92■□□□□ 0.14
SPTBN1-203ENST00000389980 AXIN2Q9Y2T1 843 aa15.91■□□□□ 0.14
SPTBN1-203ENST00000389980 RGPD5Q99666 1765 aa15.91■□□□□ 0.14
SPTBN1-203ENST00000389980 SOS2Q07890 1332 aaPredicted RBP15.91■□□□□ 0.14
SPTBN1-203ENST00000389980 FAM83GA6ND36 823 aa15.9■□□□□ 0.14
SPTBN1-203ENST00000389980 RRP1P56182 461 aaKnown RBP15.9■□□□□ 0.14
SPTBN1-203ENST00000389980 TSR2Q969E8 191 aaKnown RBP15.9■□□□□ 0.14
SPTBN1-203ENST00000389980 PHRF1Q9P1Y6 1649 aaKnown RBP15.9■□□□□ 0.14
SPTBN1-203ENST00000389980 PLIN1O60240 522 aa15.9■□□□□ 0.14
SPTBN1-203ENST00000389980 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
SPTBN1-203ENST00000389980 KDRP35968 1356 aa15.89■□□□□ 0.13
SPTBN1-203ENST00000389980 NBPF6Q5VWK0 638 aa15.89■□□□□ 0.13
SPTBN1-203ENST00000389980 NBPF4Q96M43 638 aa15.89■□□□□ 0.13
SPTBN1-203ENST00000389980 DCTN1Q14203 1278 aa15.89■□□□□ 0.13
SPTBN1-203ENST00000389980 CRYBG1Q9Y4K1 1723 aa15.88■□□□□ 0.13
SPTBN1-203ENST00000389980 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
SPTBN1-203ENST00000389980 MTHFSDQ2M296 383 aaKnown RBP15.87■□□□□ 0.13
SPTBN1-203ENST00000389980 LAS1LQ9Y4W2 734 aaKnown RBP15.87■□□□□ 0.13
SPTBN1-203ENST00000389980 NHSL1Q5SYE7 1610 aa15.87■□□□□ 0.13
SPTBN1-203ENST00000389980 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
SPTBN1-203ENST00000389980 CHRNA2Q15822 529 aa15.86■□□□□ 0.13
SPTBN1-203ENST00000389980 ANKRD24Q8TF21 1146 aa15.86■□□□□ 0.13
SPTBN1-203ENST00000389980 BCAR3O75815 825 aa15.85■□□□□ 0.13
SPTBN1-203ENST00000389980 ROBO1Q9Y6N7 1651 aa15.85■□□□□ 0.13
SPTBN1-203ENST00000389980 IL16Q14005 1332 aa15.85■□□□□ 0.13
SPTBN1-203ENST00000389980 MCM10Q7L590 875 aa15.85■□□□□ 0.13
SPTBN1-203ENST00000389980 KIAA0232Q92628 1395 aa15.84■□□□□ 0.13
SPTBN1-203ENST00000389980 EXOSC9Q06265 439 aaKnown RBP15.83■□□□□ 0.13
SPTBN1-203ENST00000389980 COL18A1P39060 1754 aa15.83■□□□□ 0.13
SPTBN1-203ENST00000389980 LMOD3Q0VAK6 560 aa15.83■□□□□ 0.12
SPTBN1-203ENST00000389980 ERBB3P21860 1342 aa15.82■□□□□ 0.12
SPTBN1-203ENST00000389980 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
SPTBN1-203ENST00000389980 HAP1P54257 671 aaPredicted RBP15.81■□□□□ 0.12
SPTBN1-203ENST00000389980 ANP32EQ9BTT0 268 aa15.81■□□□□ 0.12
SPTBN1-203ENST00000389980 BCL2L13Q9BXK5 485 aa15.8■□□□□ 0.12
SPTBN1-203ENST00000389980 RARSP54136 660 aaKnown RBP15.8■□□□□ 0.12
SPTBN1-203ENST00000389980 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
SPTBN1-203ENST00000389980 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
SPTBN1-203ENST00000389980 MBIPQ9NS73 344 aa15.8■□□□□ 0.12
SPTBN1-203ENST00000389980 ABCA3Q99758 1704 aa15.79■□□□□ 0.12
SPTBN1-203ENST00000389980 CALD1Q05682 793 aaKnown RBP15.79■□□□□ 0.12
SPTBN1-203ENST00000389980 ERICH6BQ5W0A0 696 aa15.79■□□□□ 0.12
SPTBN1-203ENST00000389980 EXOC6Q8TAG9 804 aa15.79■□□□□ 0.12
SPTBN1-203ENST00000389980 IFT57Q9NWB7 429 aa15.79■□□□□ 0.12
SPTBN1-203ENST00000389980 CPDO75976 1380 aa15.79■□□□□ 0.12
SPTBN1-203ENST00000389980 ZNF853P0CG23 659 aa15.79■□□□□ 0.12
SPTBN1-203ENST00000389980 GNAI1P63096 354 aa15.79■□□□□ 0.12
SPTBN1-203ENST00000389980 PRDM11Q9NQV5 511 aa15.79■□□□□ 0.12
SPTBN1-203ENST00000389980 NLRP2Q9NX02 1062 aa15.79■□□□□ 0.12
SPTBN1-203ENST00000389980 PIP4K2BP78356 416 aa15.78■□□□□ 0.12
SPTBN1-203ENST00000389980 CFAP44Q96MT7 982 aa15.78■□□□□ 0.12
SPTBN1-203ENST00000389980 PPP4R2Q9NY27 417 aa15.78■□□□□ 0.12
SPTBN1-203ENST00000389980 CSB-PGBD3P0DP91 1061 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms