RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 PLEKHF1Q96S99 279 aa15.37■□□□□ 0.05
CAPRIN1-202ENST00000389645 TRMT2AQ8IZ69 625 aaKnown RBP15.37■□□□□ 0.05
CAPRIN1-202ENST00000389645 COL3A1P02461 1466 aaPredicted RBP15.37■□□□□ 0.05
CAPRIN1-202ENST00000389645 RGPD8O14715 1765 aaPredicted RBP15.37■□□□□ 0.05
CAPRIN1-202ENST00000389645 MAP2P11137 1827 aaKnown RBP15.36■□□□□ 0.05
CAPRIN1-202ENST00000389645 PCDHB15Q9Y5E8 787 aa15.36■□□□□ 0.05
CAPRIN1-202ENST00000389645 PRKAR2BP31323 418 aa15.36■□□□□ 0.05
CAPRIN1-202ENST00000389645 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
CAPRIN1-202ENST00000389645 NGEFQ8N5V2 710 aa15.36■□□□□ 0.05
CAPRIN1-202ENST00000389645 PNPLA6Q8IY17 1366 aa15.35■□□□□ 0.05
CAPRIN1-202ENST00000389645 TMPOP42166 694 aaKnown RBP15.35■□□□□ 0.05
CAPRIN1-202ENST00000389645 NFKBIBQ15653 356 aa15.35■□□□□ 0.05
CAPRIN1-202ENST00000389645 ANKRD26Q9UPS8 1709 aa15.35■□□□□ 0.05
CAPRIN1-202ENST00000389645 RWDD1Q9H446 243 aaPredicted RBP15.35■□□□□ 0.05
CAPRIN1-202ENST00000389645 USP6P35125 1406 aa15.35■□□□□ 0.05
CAPRIN1-202ENST00000389645 DIP2AQ14689 1571 aa15.35■□□□□ 0.05
CAPRIN1-202ENST00000389645 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
CAPRIN1-202ENST00000389645 PHACTR3Q96KR7 559 aa15.34■□□□□ 0.05
CAPRIN1-202ENST00000389645 PDZRN3Q9UPQ7 1066 aa15.34■□□□□ 0.05
CAPRIN1-202ENST00000389645 ADGRB2O60241 1585 aa15.34■□□□□ 0.05
CAPRIN1-202ENST00000389645 NPHP4O75161 1426 aaPredicted RBP15.34■□□□□ 0.05
CAPRIN1-202ENST00000389645 SEC24BO95487 1268 aa15.33■□□□□ 0.05
CAPRIN1-202ENST00000389645 IL13P35225 146 aa15.33■□□□□ 0.05
CAPRIN1-202ENST00000389645 THUMPD2Q9BTF0 503 aaKnown RBP15.33■□□□□ 0.05
CAPRIN1-202ENST00000389645 HSP90AB2PQ58FF8 381 aa15.33■□□□□ 0.04
CAPRIN1-202ENST00000389645 WDR63Q8IWG1 891 aa15.33■□□□□ 0.04
CAPRIN1-202ENST00000389645 A0A0U1RQG5 324 aaPredicted RBP15.33■□□□□ 0.04
CAPRIN1-202ENST00000389645 ESCO1Q5FWF5 840 aa15.33■□□□□ 0.04
CAPRIN1-202ENST00000389645 XRN1Q8IZH2 1706 aaKnown RBP15.33■□□□□ 0.04
CAPRIN1-202ENST00000389645 PIK3R4Q99570 1358 aa15.32■□□□□ 0.04
CAPRIN1-202ENST00000389645 ITSN1Q15811 1721 aa15.32■□□□□ 0.04
CAPRIN1-202ENST00000389645 XPCQ01831 940 aaPredicted RBP15.32■□□□□ 0.04
CAPRIN1-202ENST00000389645 ZMYND15Q9H091 742 aa15.32■□□□□ 0.04
CAPRIN1-202ENST00000389645 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
CAPRIN1-202ENST00000389645 NLRP6P59044 892 aa15.32■□□□□ 0.04
CAPRIN1-202ENST00000389645 PHF23Q9BUL5 403 aaPredicted RBP15.32■□□□□ 0.04
CAPRIN1-202ENST00000389645 MON2Q7Z3U7 1717 aa15.32■□□□□ 0.04
CAPRIN1-202ENST00000389645 MFAP1P55081 439 aaKnown RBP15.31■□□□□ 0.04
CAPRIN1-202ENST00000389645 RSPH6AQ9H0K4 717 aa15.31■□□□□ 0.04
CAPRIN1-202ENST00000389645 IQSEC2Q5JU85 1478 aa15.31■□□□□ 0.04
CAPRIN1-202ENST00000389645 PROSER2Q86WR7 435 aaPredicted RBP15.31■□□□□ 0.04
CAPRIN1-202ENST00000389645 AKAP12Q02952 1782 aa15.31■□□□□ 0.04
CAPRIN1-202ENST00000389645 FRAT2O75474 233 aaPredicted RBP15.31■□□□□ 0.04
CAPRIN1-202ENST00000389645 BECN1Q14457 450 aa15.31■□□□□ 0.04
CAPRIN1-202ENST00000389645 FCHSD2O94868 740 aa15.3■□□□□ 0.04
CAPRIN1-202ENST00000389645 SSH1Q8WYL5 1049 aa15.3■□□□□ 0.04
CAPRIN1-202ENST00000389645 AEBP1Q8IUX7 1158 aa15.3■□□□□ 0.04
CAPRIN1-202ENST00000389645 ORAI2Q96SN7 254 aa15.3■□□□□ 0.04
CAPRIN1-202ENST00000389645 PHF8Q9UPP1 1060 aa15.3■□□□□ 0.04
CAPRIN1-202ENST00000389645 ZNF142P52746 1687 aaPredicted RBP15.3■□□□□ 0.04
CAPRIN1-202ENST00000389645 ABTB2Q8N961 1025 aa15.3■□□□□ 0.04
CAPRIN1-202ENST00000389645 NOB1Q9ULX3 412 aaKnown RBP15.3■□□□□ 0.04
CAPRIN1-202ENST00000389645 EIF4A2Q14240 407 aaKnown RBP15.29■□□□□ 0.04
CAPRIN1-202ENST00000389645 AATKQ6ZMQ8 1374 aa15.29■□□□□ 0.04
CAPRIN1-202ENST00000389645 CHD2O14647 1828 aaKnown RBP15.28■□□□□ 0.04
CAPRIN1-202ENST00000389645 TOPAZ1Q8N9V7 1692 aa15.28■□□□□ 0.04
CAPRIN1-202ENST00000389645 SSH2Q76I76 1423 aa15.28■□□□□ 0.04
CAPRIN1-202ENST00000389645 FOXO3O43524 673 aa15.27■□□□□ 0.04
CAPRIN1-202ENST00000389645 MVPQ14764 893 aaKnown RBP15.27■□□□□ 0.04
CAPRIN1-202ENST00000389645 CCDC27Q2M243 656 aa15.27■□□□□ 0.04
CAPRIN1-202ENST00000389645 MAP3K19Q56UN5 1328 aa15.27■□□□□ 0.04
CAPRIN1-202ENST00000389645 SULT6B1Q6IMI4 303 aa15.27■□□□□ 0.03
CAPRIN1-202ENST00000389645 USP35Q9P2H5 1018 aa15.27■□□□□ 0.03
CAPRIN1-202ENST00000389645 OVOS2A0A0J9YW53 1432 aa15.27■□□□□ 0.03
CAPRIN1-202ENST00000389645 OVOS2Q6IE36 1432 aa15.27■□□□□ 0.03
CAPRIN1-202ENST00000389645 PSME1Q06323 249 aa15.26■□□□□ 0.03
CAPRIN1-202ENST00000389645 C1orf115Q9H7X2 142 aa15.26■□□□□ 0.03
CAPRIN1-202ENST00000389645 ZBTB7CA1YPR0 619 aa15.26■□□□□ 0.03
CAPRIN1-202ENST00000389645 TRIM27P14373 513 aa15.26■□□□□ 0.03
CAPRIN1-202ENST00000389645 LMOD2Q6P5Q4 547 aa15.26■□□□□ 0.03
CAPRIN1-202ENST00000389645 LNPKQ9C0E8 428 aa15.26■□□□□ 0.03
CAPRIN1-202ENST00000389645 AMPHP49418 695 aa15.25■□□□□ 0.03
CAPRIN1-202ENST00000389645 TTC21AQ8NDW8 1320 aa15.25■□□□□ 0.03
CAPRIN1-202ENST00000389645 KDM4FA0A1W2PPD8 638 aa15.25■□□□□ 0.03
CAPRIN1-202ENST00000389645 FAM83GA6ND36 823 aa15.25■□□□□ 0.03
CAPRIN1-202ENST00000389645 LRRC7Q96NW7 1537 aa15.25■□□□□ 0.03
CAPRIN1-202ENST00000389645 DCTN1Q14203 1278 aa15.25■□□□□ 0.03
CAPRIN1-202ENST00000389645 TMEM57Q8N5G2 664 aa15.25■□□□□ 0.03
CAPRIN1-202ENST00000389645 LTV1Q96GA3 475 aaPredicted RBP15.25■□□□□ 0.03
CAPRIN1-202ENST00000389645 PNNQ9H307 717 aaKnown RBP15.25■□□□□ 0.03
CAPRIN1-202ENST00000389645 NALCNQ8IZF0 1738 aa15.24■□□□□ 0.03
CAPRIN1-202ENST00000389645 APBB1O00213 710 aa15.24■□□□□ 0.03
CAPRIN1-202ENST00000389645 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
CAPRIN1-202ENST00000389645 CDK12Q9NYV4 1490 aaPredicted RBP15.24■□□□□ 0.03
CAPRIN1-202ENST00000389645 IPO8O15397 1037 aaKnown RBP15.23■□□□□ 0.03
CAPRIN1-202ENST00000389645 GSE1Q14687 1217 aa15.23■□□□□ 0.03
CAPRIN1-202ENST00000389645 NRKQ7Z2Y5 1582 aa15.23■□□□□ 0.03
CAPRIN1-202ENST00000389645 DDX19BQ9UMR2 479 aa15.23■□□□□ 0.03
CAPRIN1-202ENST00000389645 NFE2L2Q16236 605 aa15.23■□□□□ 0.03
CAPRIN1-202ENST00000389645 ANKARQ7Z5J8 1434 aa15.22■□□□□ 0.03
CAPRIN1-202ENST00000389645 DDX17Q92841 729 aaKnown RBP15.22■□□□□ 0.03
CAPRIN1-202ENST00000389645 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
CAPRIN1-202ENST00000389645 USP31Q70CQ4 1352 aa15.21■□□□□ 0.03
CAPRIN1-202ENST00000389645 FMN2Q9NZ56 1722 aa15.21■□□□□ 0.03
CAPRIN1-202ENST00000389645 HSP90AA1P07900 732 aaKnown RBP15.2■□□□□ 0.02
CAPRIN1-202ENST00000389645 ANKRD45Q5TZF3 282 aa15.2■□□□□ 0.02
CAPRIN1-202ENST00000389645 GZF1Q9H116 711 aaPredicted RBP15.19■□□□□ 0.02
CAPRIN1-202ENST00000389645 PEAK1Q9H792 1746 aa15.18■□□□□ 0.02
CAPRIN1-202ENST00000389645 C19orf44Q9H6X5 657 aa15.18■□□□□ 0.02
CAPRIN1-202ENST00000389645 PIK3C2AO00443 1686 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms