RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 MAP7D2Q96T17 732 aa23.24■■□□□ 1.31
PPFIA1-202ENST00000389547 KIF1BO60333 1816 aa23.24■■□□□ 1.31
PPFIA1-202ENST00000389547 SPINK5Q9NQ38 1064 aaPredicted RBP23.24■■□□□ 1.31
PPFIA1-202ENST00000389547 SKOR2Q2VWA4 1001 aaPredicted RBP23.23■■□□□ 1.31
PPFIA1-202ENST00000389547 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
PPFIA1-202ENST00000389547 NOB1Q9ULX3 412 aaKnown RBP23.23■■□□□ 1.31
PPFIA1-202ENST00000389547 KIAA2012Q0VF49 1180 aa23.23■■□□□ 1.31
PPFIA1-202ENST00000389547 FKBP5Q13451 457 aaPredicted RBP23.23■■□□□ 1.31
PPFIA1-202ENST00000389547 PRDM10Q9NQV6 1147 aa23.22■■□□□ 1.31
PPFIA1-202ENST00000389547 CEP152O94986 1710 aa23.22■■□□□ 1.31
PPFIA1-202ENST00000389547 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
PPFIA1-202ENST00000389547 MYOM2P54296 1465 aa23.22■■□□□ 1.31
PPFIA1-202ENST00000389547 CHAF1AQ13111 956 aaPredicted RBP23.22■■□□□ 1.31
PPFIA1-202ENST00000389547 ABCC11Q96J66 1382 aa23.22■■□□□ 1.31
PPFIA1-202ENST00000389547 C22orf23Q9BZE7 217 aa23.21■■□□□ 1.31
PPFIA1-202ENST00000389547 DDX19BQ9UMR2 479 aa23.2■■□□□ 1.31
PPFIA1-202ENST00000389547 ARHGAP31Q2M1Z3 1444 aa23.2■■□□□ 1.3
PPFIA1-202ENST00000389547 KRT28Q7Z3Y7 464 aa23.19■■□□□ 1.3
PPFIA1-202ENST00000389547 KIF16BQ96L93 1317 aa23.19■■□□□ 1.3
PPFIA1-202ENST00000389547 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
PPFIA1-202ENST00000389547 DIP2CQ9Y2E4 1556 aa23.19■■□□□ 1.3
PPFIA1-202ENST00000389547 ZNF428Q96B54 188 aa23.19■■□□□ 1.3
PPFIA1-202ENST00000389547 ZNF530Q6P9A1 599 aaPredicted RBP23.19■■□□□ 1.3
PPFIA1-202ENST00000389547 DMRT2Q9Y5R5 561 aa23.18■■□□□ 1.3
PPFIA1-202ENST00000389547 POLR3AO14802 1390 aaPredicted RBP23.18■■□□□ 1.3
PPFIA1-202ENST00000389547 ANKRD45Q5TZF3 282 aa23.18■■□□□ 1.3
PPFIA1-202ENST00000389547 PHACTR3Q96KR7 559 aa23.18■■□□□ 1.3
PPFIA1-202ENST00000389547 ORAI2Q96SN7 254 aa23.18■■□□□ 1.3
PPFIA1-202ENST00000389547 PRDM11Q9NQV5 511 aa23.18■■□□□ 1.3
PPFIA1-202ENST00000389547 ABCA6Q8N139 1617 aa23.17■■□□□ 1.3
PPFIA1-202ENST00000389547 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
PPFIA1-202ENST00000389547 DNAJC5Q9H3Z4 198 aa23.17■■□□□ 1.3
PPFIA1-202ENST00000389547 C1orf115Q9H7X2 142 aa23.17■■□□□ 1.3
PPFIA1-202ENST00000389547 ZHX1Q9UKY1 873 aaPredicted RBP23.17■■□□□ 1.3
PPFIA1-202ENST00000389547 SBNO2Q9Y2G9 1366 aa23.17■■□□□ 1.3
PPFIA1-202ENST00000389547 RARSP54136 660 aaKnown RBP23.17■■□□□ 1.3
PPFIA1-202ENST00000389547 SYTL4Q96C24 671 aaPredicted RBP23.16■■□□□ 1.3
PPFIA1-202ENST00000389547 PPRC1Q5VV67 1664 aaKnown RBP23.16■■□□□ 1.3
PPFIA1-202ENST00000389547 API5Q9BZZ5 524 aaKnown RBP23.15■■□□□ 1.3
PPFIA1-202ENST00000389547 C8orf34Q49A92 452 aa23.14■■□□□ 1.3
PPFIA1-202ENST00000389547 EIF4A2Q14240 407 aaKnown RBP23.14■■□□□ 1.3
PPFIA1-202ENST00000389547 SLC4A2P04920 1241 aa23.14■■□□□ 1.29
PPFIA1-202ENST00000389547 PDE3AQ14432 1141 aa23.14■■□□□ 1.29
PPFIA1-202ENST00000389547 FOXD4L5Q5VV16 416 aaPredicted RBP23.13■■□□□ 1.29
PPFIA1-202ENST00000389547 FOXD4L4Q8WXT5 416 aaPredicted RBP23.13■■□□□ 1.29
PPFIA1-202ENST00000389547 TRPM1Q7Z4N2 1603 aa23.13■■□□□ 1.29
PPFIA1-202ENST00000389547 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
PPFIA1-202ENST00000389547 PLEKHO1Q53GL0 409 aaPredicted RBP23.13■■□□□ 1.29
PPFIA1-202ENST00000389547 CABLES1Q8TDN4 633 aa23.13■■□□□ 1.29
PPFIA1-202ENST00000389547 ROBO2Q9HCK4 1378 aa23.13■■□□□ 1.29
PPFIA1-202ENST00000389547 KCNH5Q8NCM2 988 aa23.13■■□□□ 1.29
PPFIA1-202ENST00000389547 AIMP1Q12904 312 aaKnown RBP23.12■■□□□ 1.29
PPFIA1-202ENST00000389547 TTC5Q8N0Z6 440 aa23.12■■□□□ 1.29
PPFIA1-202ENST00000389547 NPC1L1Q9UHC9 1359 aa23.12■■□□□ 1.29
PPFIA1-202ENST00000389547 UQCRHLA0A096LP55 91 aa23.12■■□□□ 1.29
PPFIA1-202ENST00000389547 UQCRHP07919 91 aa23.12■■□□□ 1.29
PPFIA1-202ENST00000389547 ATF7IPQ6VMQ6 1270 aa23.12■■□□□ 1.29
PPFIA1-202ENST00000389547 LNPKQ9C0E8 428 aa23.11■■□□□ 1.29
PPFIA1-202ENST00000389547 A2ML1A8K2U0 1454 aa23.11■■□□□ 1.29
PPFIA1-202ENST00000389547 RNF123Q5XPI4 1314 aa23.11■■□□□ 1.29
PPFIA1-202ENST00000389547 TOM1L2Q6ZVM7 507 aa23.11■■□□□ 1.29
PPFIA1-202ENST00000389547 MAP3K4Q9Y6R4 1608 aa23.11■■□□□ 1.29
PPFIA1-202ENST00000389547 CCDC173Q0VFZ6 552 aa23.11■■□□□ 1.29
PPFIA1-202ENST00000389547 TBC1D2Q9BYX2 928 aa23.11■■□□□ 1.29
PPFIA1-202ENST00000389547 MAP3K19Q56UN5 1328 aa23.1■■□□□ 1.29
PPFIA1-202ENST00000389547 PIP4K2BP78356 416 aa23.1■■□□□ 1.29
PPFIA1-202ENST00000389547 DDX17Q92841 729 aaKnown RBP23.1■■□□□ 1.29
PPFIA1-202ENST00000389547 DIP2BQ9P265 1576 aa23.09■■□□□ 1.29
PPFIA1-202ENST00000389547 DDX54Q8TDD1 881 aaKnown RBP23.09■■□□□ 1.29
PPFIA1-202ENST00000389547 CHMP3Q9Y3E7 222 aa23.09■■□□□ 1.29
PPFIA1-202ENST00000389547 CSPP1Q1MSJ5 1256 aa23.08■■□□□ 1.29
PPFIA1-202ENST00000389547 MTERF4Q7Z6M4 381 aaKnown RBP23.08■■□□□ 1.29
PPFIA1-202ENST00000389547 ZSCAN30Q86W11 494 aa23.08■■□□□ 1.29
PPFIA1-202ENST00000389547 NKTRP30414 1462 aaKnown RBP23.08■■□□□ 1.29
PPFIA1-202ENST00000389547 ZNF771Q7L3S4 317 aaPredicted RBP23.08■■□□□ 1.29
PPFIA1-202ENST00000389547 CADPS2Q86UW7 1296 aa23.07■■□□□ 1.28
PPFIA1-202ENST00000389547 C19orf44Q9H6X5 657 aa23.07■■□□□ 1.28
PPFIA1-202ENST00000389547 PRR36Q9H6K5 1346 aa23.07■■□□□ 1.28
PPFIA1-202ENST00000389547 NUTM2BA6NNL0 878 aaPredicted RBP23.07■■□□□ 1.28
PPFIA1-202ENST00000389547 NUTM2EB1AL46 878 aaPredicted RBP23.07■■□□□ 1.28
PPFIA1-202ENST00000389547 HMMRO75330 724 aa23.07■■□□□ 1.28
PPFIA1-202ENST00000389547 NUTM2AQ8IVF1 878 aaPredicted RBP23.07■■□□□ 1.28
PPFIA1-202ENST00000389547 CHMP4AQ9BY43 222 aa23.06■■□□□ 1.28
PPFIA1-202ENST00000389547 HDGFL1Q5TGJ6 251 aa23.06■■□□□ 1.28
PPFIA1-202ENST00000389547 TNNQ9UQP3 1299 aa23.06■■□□□ 1.28
PPFIA1-202ENST00000389547 TATP17735 454 aaPredicted RBP23.06■■□□□ 1.28
PPFIA1-202ENST00000389547 CASC1Q6TDU7 716 aa23.06■■□□□ 1.28
PPFIA1-202ENST00000389547 MPRIPQ6WCQ1 1025 aa23.06■■□□□ 1.28
PPFIA1-202ENST00000389547 GNAT3A8MTJ3 354 aa23.06■■□□□ 1.28
PPFIA1-202ENST00000389547 TMEM57Q8N5G2 664 aa23.06■■□□□ 1.28
PPFIA1-202ENST00000389547 ISY1Q9ULR0 285 aaKnown RBP23.06■■□□□ 1.28
PPFIA1-202ENST00000389547 PDZRN3Q9UPQ7 1066 aa23.06■■□□□ 1.28
PPFIA1-202ENST00000389547 TTC21AQ8NDW8 1320 aa23.05■■□□□ 1.28
PPFIA1-202ENST00000389547 LRRC59Q96AG4 307 aaKnown RBP23.05■■□□□ 1.28
PPFIA1-202ENST00000389547 MADDQ8WXG6 1647 aa23.04■■□□□ 1.28
PPFIA1-202ENST00000389547 LMTK2Q8IWU2 1503 aa23.04■■□□□ 1.28
PPFIA1-202ENST00000389547 MCTP1Q6DN14 999 aa23.03■■□□□ 1.28
PPFIA1-202ENST00000389547 RNF214Q8ND24 703 aa23.03■■□□□ 1.28
PPFIA1-202ENST00000389547 MBIPQ9NS73 344 aa23.03■■□□□ 1.28
PPFIA1-202ENST00000389547 MVPQ14764 893 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms