RNA–Protein interactions for RNA: ENST00000384559.1

RNU6-1235P-201, Transcript of RNA, U6 small nuclear 1235, pseudogene, humanhuman

BASIC

Gene RNU6-1235P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1235P-201ENST00000384559 VASH1Q7L8A9 365 aaPredicted RBP3.97□□□□□ -1.77
RNU6-1235P-201ENST00000384559 ZNF598Q86UK7 904 aaKnown RBP3.97□□□□□ -1.77
RNU6-1235P-201ENST00000384559 RNF135Q8IUD6 432 aa3.97□□□□□ -1.77
RNU6-1235P-201ENST00000384559 DEPDC4Q8N2C3 294 aa3.97□□□□□ -1.77
RNU6-1235P-201ENST00000384559 PHTF2Q8N3S3 785 aa3.97□□□□□ -1.77
RNU6-1235P-201ENST00000384559 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 USP17L5A8MUK1 530 aa3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 ESPNB1AK53 854 aa3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 ATP9BO43861 1147 aa3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 FSHRP23945 695 aa3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 LMOD1P29536 600 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 SLFNL1Q499Z3 407 aa3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 CDCA8Q53HL2 280 aa3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 INTS6LQ5JSJ4 861 aaKnown RBP3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 TRIM67Q6ZTA4 783 aa3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 KCTD15Q96SI1 283 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 CDCA7Q9BWT1 371 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 MAFBQ9Y5Q3 323 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 V9GY48 417 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1235P-201ENST00000384559 USP17L3A6NCW0 530 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 USP17L4A6NCW7 530 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 GDF9O60383 454 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 GRM5P41594 1212 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 TRAF7Q6Q0C0 670 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 USP17L2Q6R6M4 530 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 USP17L1Q7RTZ2 530 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 PLPP7Q8NBV4 271 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 CDK15Q96Q40 435 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 MAP4K5Q9Y4K4 846 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 PCDHB11Q9Y5F2 797 aa3.95□□□□□ -1.78
RNU6-1235P-201ENST00000384559 J3QL48 77 aa3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 ADH1CP00326 375 aa3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 ALDH1A1P00352 501 aa3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 NR3C2P08235 984 aa3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 MCCD1P59942 119 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 NCOA4Q13772 614 aa3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 NBPF20Q3BBV1 942 aa3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 OXLD1Q5BKU9 147 aa3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 TMPRSS4Q9NRS4 437 aa3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 CHIC2Q9UKJ5 165 aa3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 CDV3Q9UKY7 258 aaKnown RBP3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 DOLKQ9UPQ8 538 aa3.94□□□□□ -1.78
RNU6-1235P-201ENST00000384559 ERVH48-1M5A8F1 160 aa3.93□□□□□ -1.78
RNU6-1235P-201ENST00000384559 SCTRP47872 440 aa3.93□□□□□ -1.78
RNU6-1235P-201ENST00000384559 SRPK2P78362 688 aaKnown RBP3.93□□□□□ -1.78
RNU6-1235P-201ENST00000384559 NNTQ13423 1086 aa3.93□□□□□ -1.78
RNU6-1235P-201ENST00000384559 KANK4Q5T7N3 995 aaPredicted RBP3.93□□□□□ -1.78
RNU6-1235P-201ENST00000384559 NFATC2IPQ8NCF5 419 aa3.93□□□□□ -1.78
RNU6-1235P-201ENST00000384559 ZNF592Q92610 1267 aa3.93□□□□□ -1.78
RNU6-1235P-201ENST00000384559 TOR4AQ9NXH8 423 aa3.93□□□□□ -1.78
RNU6-1235P-201ENST00000384559 TTC24A2A3L6 582 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 STAU1O95793 577 aaKnown RBP3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 SMPD1P17405 629 aa3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 EML3Q32P44 896 aa3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 PPP1R26Q5T8A7 1209 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 RNF20Q5VTR2 975 aa3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 PLEKHM2Q8IWE5 1019 aa3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 CCDC116Q8IYX3 515 aa3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 CYP4X1Q8N118 509 aa3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 MPNDQ8N594 471 aa3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 ZNF784Q8NCA9 323 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 SNIP1Q8TAD8 396 aaKnown RBP3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 PBXIP1Q96AQ6 731 aa3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 CYLDQ9NQC7 956 aa3.92□□□□□ -1.78
RNU6-1235P-201ENST00000384559 CARNS1A5YM72 827 aa3.91□□□□□ -1.78
RNU6-1235P-201ENST00000384559 CRTC2Q53ET0 693 aaPredicted RBP3.91□□□□□ -1.78
RNU6-1235P-201ENST00000384559 SEPT12Q8IYM1 358 aa3.91□□□□□ -1.78
RNU6-1235P-201ENST00000384559 RETREG2Q8NC44 543 aa3.91□□□□□ -1.78
RNU6-1235P-201ENST00000384559 HPS1Q92902 700 aa3.91□□□□□ -1.78
RNU6-1235P-201ENST00000384559 MKRN1Q9UHC7 482 aaKnown RBP3.91□□□□□ -1.78
RNU6-1235P-201ENST00000384559 KIAA1024Q9UPX6 916 aa3.91□□□□□ -1.78
RNU6-1235P-201ENST00000384559 WASF2Q9Y6W5 498 aa3.91□□□□□ -1.78
RNU6-1235P-201ENST00000384559 USP17L15C9J2P7 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L10C9JJH3 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L13C9JLJ4 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L12C9JPN9 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L11C9JVI0 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L21D6R901 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L18D6R9N7 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L22D6RA61 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L17D6RBQ6 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L19D6RCP7 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L20D6RJB6 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 LILRA1O75019 489 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 TIMP2P16035 220 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 ADD1P35611 737 aaKnown RBP3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 ERVK-9P63128 1117 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 GTF2IP78347 998 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 CLDN10P78369 228 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 PRR20EP86478 221 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 PRR20CP86479 221 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 PRR20DP86480 221 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 PRR20BP86481 221 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 PRR20AP86496 221 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 USP17L24Q0WX57 530 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 CBLBQ13191 982 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 NR5A1Q13285 461 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 MAP7D1Q3KQU3 841 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 ITPKCQ96DU7 683 aa3.9□□□□□ -1.79
RNU6-1235P-201ENST00000384559 OSBPL3Q9H4L5 887 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms