RNA–Protein interactions for RNA: ENST00000382045.3

LINC00487-201, long intergenic non-protein coding RNA 487, humanhuman

TSL 2 BASIC

Gene LINC00487, Length 2,131 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-201ENST00000382045 RRS1Q15050 365 aaKnown RBP21.07■□□□□ 0.96
LINC00487-201ENST00000382045 USP35Q9P2H5 1018 aa21.07■□□□□ 0.96
LINC00487-201ENST00000382045 IPO8O15397 1037 aaKnown RBP21.07■□□□□ 0.96
LINC00487-201ENST00000382045 LTKP29376 864 aa21.07■□□□□ 0.96
LINC00487-201ENST00000382045 HDAC1Q13547 482 aaPredicted RBP21.07■□□□□ 0.96
LINC00487-201ENST00000382045 TMEM57Q8N5G2 664 aa21.07■□□□□ 0.96
LINC00487-201ENST00000382045 ZNF428Q96B54 188 aa21.07■□□□□ 0.96
LINC00487-201ENST00000382045 CALD1Q05682 793 aaKnown RBP21.06■□□□□ 0.96
LINC00487-201ENST00000382045 DAXXQ9UER7 740 aaPredicted RBP21.06■□□□□ 0.96
LINC00487-201ENST00000382045 BRPF1P55201 1214 aaPredicted RBP21.05■□□□□ 0.96
LINC00487-201ENST00000382045 THUMPD2Q9BTF0 503 aaKnown RBP21.05■□□□□ 0.96
LINC00487-201ENST00000382045 NALCNQ8IZF0 1738 aa21.05■□□□□ 0.96
LINC00487-201ENST00000382045 IFT57Q9NWB7 429 aa21.04■□□□□ 0.96
LINC00487-201ENST00000382045 ZBTB40Q9NUA8 1239 aa21.04■□□□□ 0.96
LINC00487-201ENST00000382045 ZNF853P0CG23 659 aa21.03■□□□□ 0.96
LINC00487-201ENST00000382045 OVOS2A0A0J9YW53 1432 aa21.03■□□□□ 0.96
LINC00487-201ENST00000382045 OVOS2Q6IE36 1432 aa21.03■□□□□ 0.96
LINC00487-201ENST00000382045 GNAI1P63096 354 aa21.02■□□□□ 0.96
LINC00487-201ENST00000382045 PTPRUQ92729 1446 aa21.02■□□□□ 0.96
LINC00487-201ENST00000382045 VAMP4O75379 141 aa21.01■□□□□ 0.95
LINC00487-201ENST00000382045 TTC21BQ7Z4L5 1316 aa21.01■□□□□ 0.95
LINC00487-201ENST00000382045 SLIT1O75093 1534 aa21.01■□□□□ 0.95
LINC00487-201ENST00000382045 USP6P35125 1406 aa21.01■□□□□ 0.95
LINC00487-201ENST00000382045 ACEP12821 1306 aa21■□□□□ 0.95
LINC00487-201ENST00000382045 PTCH1Q13635 1447 aa21■□□□□ 0.95
LINC00487-201ENST00000382045 PLEKHG3A1L390 1219 aa21■□□□□ 0.95
LINC00487-201ENST00000382045 LMOD3Q0VAK6 560 aa21■□□□□ 0.95
LINC00487-201ENST00000382045 MBIPQ9NS73 344 aa21■□□□□ 0.95
LINC00487-201ENST00000382045 ARHGAP23Q9P227 1491 aa20.99■□□□□ 0.95
LINC00487-201ENST00000382045 PEAK1Q9H792 1746 aa20.99■□□□□ 0.95
LINC00487-201ENST00000382045 SMC5Q8IY18 1101 aa20.99■□□□□ 0.95
LINC00487-201ENST00000382045 TSPYL6Q8N831 410 aa20.99■□□□□ 0.95
LINC00487-201ENST00000382045 RGPD1P0DJD0 1748 aa20.99■□□□□ 0.95
LINC00487-201ENST00000382045 CEBPAP49715 358 aaPredicted RBP20.98■□□□□ 0.95
LINC00487-201ENST00000382045 MRPL50Q8N5N7 158 aaKnown RBP20.98■□□□□ 0.95
LINC00487-201ENST00000382045 PIK3R4Q99570 1358 aa20.98■□□□□ 0.95
LINC00487-201ENST00000382045 CFAP44Q96MT7 982 aa20.98■□□□□ 0.95
LINC00487-201ENST00000382045 ARHGAP45Q92619 1136 aa20.97■□□□□ 0.95
LINC00487-201ENST00000382045 SLC26A8Q96RN1 970 aa20.97■□□□□ 0.95
LINC00487-201ENST00000382045 FER1L4A9Z1Z3 1794 aa20.97■□□□□ 0.95
LINC00487-201ENST00000382045 SSH2Q76I76 1423 aa20.96■□□□□ 0.95
LINC00487-201ENST00000382045 EIF4A2Q14240 407 aaKnown RBP20.96■□□□□ 0.95
LINC00487-201ENST00000382045 NUTM2FA1L443 756 aa20.95■□□□□ 0.94
LINC00487-201ENST00000382045 EID1Q9Y6B2 187 aa20.95■□□□□ 0.94
LINC00487-201ENST00000382045 USP31Q70CQ4 1352 aa20.95■□□□□ 0.94
LINC00487-201ENST00000382045 FAM83GA6ND36 823 aa20.95■□□□□ 0.94
LINC00487-201ENST00000382045 FMN2Q9NZ56 1722 aa20.94■□□□□ 0.94
LINC00487-201ENST00000382045 TBC1D32Q96NH3 1257 aa20.94■□□□□ 0.94
LINC00487-201ENST00000382045 UPF2Q9HAU5 1272 aaKnown RBP20.94■□□□□ 0.94
LINC00487-201ENST00000382045 NFKBIBQ15653 356 aa20.93■□□□□ 0.94
LINC00487-201ENST00000382045 TWISTNBQ3B726 338 aaPredicted RBP20.93■□□□□ 0.94
LINC00487-201ENST00000382045 AEBP1Q8IUX7 1158 aa20.93■□□□□ 0.94
LINC00487-201ENST00000382045 RGPD8O14715 1765 aaPredicted RBP20.93■□□□□ 0.94
LINC00487-201ENST00000382045 DIP2AQ14689 1571 aa20.92■□□□□ 0.94
LINC00487-201ENST00000382045 ABCC4O15439 1325 aa20.92■□□□□ 0.94
LINC00487-201ENST00000382045 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
LINC00487-201ENST00000382045 C8orf58Q8NAV2 365 aa20.92■□□□□ 0.94
LINC00487-201ENST00000382045 RIMS1Q86UR5 1692 aaKnown RBP20.92■□□□□ 0.94
LINC00487-201ENST00000382045 ZBTB7BO15156 539 aaPredicted RBP20.92■□□□□ 0.94
LINC00487-201ENST00000382045 DCTN1Q14203 1278 aa20.92■□□□□ 0.94
LINC00487-201ENST00000382045 SULT6B1Q6IMI4 303 aa20.92■□□□□ 0.94
LINC00487-201ENST00000382045 BCL11AQ9H165 835 aa20.92■□□□□ 0.94
LINC00487-201ENST00000382045 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
LINC00487-201ENST00000382045 TBX22Q9Y458 520 aa20.9■□□□□ 0.94
LINC00487-201ENST00000382045 NUCB1Q02818 461 aa20.9■□□□□ 0.94
LINC00487-201ENST00000382045 XRN1Q8IZH2 1706 aaKnown RBP20.9■□□□□ 0.94
LINC00487-201ENST00000382045 CHMP4BQ9H444 224 aaKnown RBP20.89■□□□□ 0.94
LINC00487-201ENST00000382045 BECN1Q14457 450 aa20.89■□□□□ 0.93
LINC00487-201ENST00000382045 HSP90AB2PQ58FF8 381 aa20.89■□□□□ 0.93
LINC00487-201ENST00000382045 TTC21AQ8NDW8 1320 aa20.88■□□□□ 0.93
LINC00487-201ENST00000382045 PIK3C2AO00443 1686 aa20.87■□□□□ 0.93
LINC00487-201ENST00000382045 CHD1LQ86WJ1 897 aa20.84■□□□□ 0.93
LINC00487-201ENST00000382045 API5Q9BZZ5 524 aaKnown RBP20.84■□□□□ 0.93
LINC00487-201ENST00000382045 ARHGEF10O15013 1369 aa20.84■□□□□ 0.93
LINC00487-201ENST00000382045 LNPKQ9C0E8 428 aa20.84■□□□□ 0.93
LINC00487-201ENST00000382045 C1orf115Q9H7X2 142 aa20.84■□□□□ 0.93
LINC00487-201ENST00000382045 MAP3K19Q56UN5 1328 aa20.84■□□□□ 0.93
LINC00487-201ENST00000382045 THEMISQ8N1K5 641 aaPredicted RBP20.83■□□□□ 0.93
LINC00487-201ENST00000382045 CHL1O00533 1208 aa20.83■□□□□ 0.92
LINC00487-201ENST00000382045 GCC1Q96CN9 775 aa20.83■□□□□ 0.92
LINC00487-201ENST00000382045 SOX12O15370 315 aa20.82■□□□□ 0.92
LINC00487-201ENST00000382045 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
LINC00487-201ENST00000382045 MCM10Q7L590 875 aa20.82■□□□□ 0.92
LINC00487-201ENST00000382045 SBNO1A3KN83 1393 aa20.82■□□□□ 0.92
LINC00487-201ENST00000382045 FLT4P35916 1363 aa20.82■□□□□ 0.92
LINC00487-201ENST00000382045 KIF24Q5T7B8 1368 aa20.82■□□□□ 0.92
LINC00487-201ENST00000382045 SIRT2Q8IXJ6 389 aa20.81■□□□□ 0.92
LINC00487-201ENST00000382045 KIAA0232Q92628 1395 aa20.81■□□□□ 0.92
LINC00487-201ENST00000382045 MARF1Q9Y4F3 1742 aaKnown RBP20.81■□□□□ 0.92
LINC00487-201ENST00000382045 RGS12O14924 1447 aa20.8■□□□□ 0.92
LINC00487-201ENST00000382045 CRB1P82279 1406 aa20.8■□□□□ 0.92
LINC00487-201ENST00000382045 KDRP35968 1356 aa20.8■□□□□ 0.92
LINC00487-201ENST00000382045 MFAP1P55081 439 aaKnown RBP20.8■□□□□ 0.92
LINC00487-201ENST00000382045 TBC1D2Q9BYX2 928 aa20.8■□□□□ 0.92
LINC00487-201ENST00000382045 C22orf23Q9BZE7 217 aa20.8■□□□□ 0.92
LINC00487-201ENST00000382045 FRAT2O75474 233 aaPredicted RBP20.8■□□□□ 0.92
LINC00487-201ENST00000382045 HAP1P54257 671 aaPredicted RBP20.8■□□□□ 0.92
LINC00487-201ENST00000382045 KRT24Q2M2I5 525 aa20.8■□□□□ 0.92
LINC00487-201ENST00000382045 NGDNQ8NEJ9 315 aaKnown RBP20.8■□□□□ 0.92
LINC00487-201ENST00000382045 ANKARQ7Z5J8 1434 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms