RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 ABTB2Q8N961 1025 aa22.34■■□□□ 1.17
RPAIN-203ENST00000381209 USP54Q70EL1 1684 aa22.34■■□□□ 1.17
RPAIN-203ENST00000381209 ARHGEF10O15013 1369 aa22.33■■□□□ 1.16
RPAIN-203ENST00000381209 PEAK1Q9H792 1746 aa22.32■■□□□ 1.16
RPAIN-203ENST00000381209 AMPHP49418 695 aa22.31■■□□□ 1.16
RPAIN-203ENST00000381209 SULT6B1Q6IMI4 303 aa22.31■■□□□ 1.16
RPAIN-203ENST00000381209 TSR2Q969E8 191 aaKnown RBP22.31■■□□□ 1.16
RPAIN-203ENST00000381209 NCOA3Q9Y6Q9 1424 aa22.31■■□□□ 1.16
RPAIN-203ENST00000381209 SOX12O15370 315 aa22.31■■□□□ 1.16
RPAIN-203ENST00000381209 PAK3O75914 559 aaPredicted RBP22.31■■□□□ 1.16
RPAIN-203ENST00000381209 EXOSC9Q06265 439 aaKnown RBP22.31■■□□□ 1.16
RPAIN-203ENST00000381209 PSME1Q06323 249 aa22.31■■□□□ 1.16
RPAIN-203ENST00000381209 C19orf44Q9H6X5 657 aa22.31■■□□□ 1.16
RPAIN-203ENST00000381209 CANXP27824 592 aaKnown RBP22.3■■□□□ 1.16
RPAIN-203ENST00000381209 IFT57Q9NWB7 429 aa22.29■■□□□ 1.16
RPAIN-203ENST00000381209 GNAI1P63096 354 aa22.27■■□□□ 1.16
RPAIN-203ENST00000381209 AEBP1Q8IUX7 1158 aa22.27■■□□□ 1.16
RPAIN-203ENST00000381209 RTL1A6NKG5 1358 aa22.27■■□□□ 1.15
RPAIN-203ENST00000381209 ZNF853P0CG23 659 aa22.26■■□□□ 1.15
RPAIN-203ENST00000381209 RGPD1P0DJD0 1748 aa22.26■■□□□ 1.15
RPAIN-203ENST00000381209 KDRP35968 1356 aa22.26■■□□□ 1.15
RPAIN-203ENST00000381209 HOXC9P31274 260 aa22.26■■□□□ 1.15
RPAIN-203ENST00000381209 AAMPQ13685 434 aa22.26■■□□□ 1.15
RPAIN-203ENST00000381209 NUTM2GQ5VZR2 741 aa22.26■■□□□ 1.15
RPAIN-203ENST00000381209 ZNF428Q96B54 188 aa22.26■■□□□ 1.15
RPAIN-203ENST00000381209 IGSF1Q8N6C5 1336 aa22.25■■□□□ 1.15
RPAIN-203ENST00000381209 KCNH5Q8NCM2 988 aa22.25■■□□□ 1.15
RPAIN-203ENST00000381209 ORAI2Q96SN7 254 aa22.25■■□□□ 1.15
RPAIN-203ENST00000381209 C1orf167Q5SNV9 1468 aa22.24■■□□□ 1.15
RPAIN-203ENST00000381209 DCCP43146 1447 aa22.24■■□□□ 1.15
RPAIN-203ENST00000381209 FRAT1Q92837 279 aaPredicted RBP22.24■■□□□ 1.15
RPAIN-203ENST00000381209 MS4A1P11836 297 aa22.23■■□□□ 1.15
RPAIN-203ENST00000381209 ALDH1L2Q3SY69 923 aa22.22■■□□□ 1.15
RPAIN-203ENST00000381209 CFAP44Q96MT7 982 aa22.22■■□□□ 1.15
RPAIN-203ENST00000381209 EYA1Q99502 592 aa22.22■■□□□ 1.15
RPAIN-203ENST00000381209 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
RPAIN-203ENST00000381209 MARF1Q9Y4F3 1742 aaKnown RBP22.22■■□□□ 1.15
RPAIN-203ENST00000381209 TMEM94Q12767 1356 aa22.22■■□□□ 1.15
RPAIN-203ENST00000381209 ZKSCAN2Q63HK3 967 aa22.21■■□□□ 1.15
RPAIN-203ENST00000381209 CENPQQ7L2Z9 268 aaPredicted RBP22.21■■□□□ 1.15
RPAIN-203ENST00000381209 KDM2BQ8NHM5 1336 aa22.21■■□□□ 1.15
RPAIN-203ENST00000381209 KDM4FA0A1W2PPD8 638 aa22.21■■□□□ 1.15
RPAIN-203ENST00000381209 THUMPD2Q9BTF0 503 aaKnown RBP22.21■■□□□ 1.15
RPAIN-203ENST00000381209 SMC4Q9NTJ3 1288 aa22.21■■□□□ 1.15
RPAIN-203ENST00000381209 FOXO3O43524 673 aa22.2■■□□□ 1.14
RPAIN-203ENST00000381209 HSPA2P54652 639 aa22.2■■□□□ 1.14
RPAIN-203ENST00000381209 PANK1Q8TE04 598 aa22.2■■□□□ 1.14
RPAIN-203ENST00000381209 SSH1Q8WYL5 1049 aa22.2■■□□□ 1.14
RPAIN-203ENST00000381209 BCL2L13Q9BXK5 485 aa22.2■■□□□ 1.14
RPAIN-203ENST00000381209 ATF3P18847 181 aa22.19■■□□□ 1.14
RPAIN-203ENST00000381209 BRPF1P55201 1214 aaPredicted RBP22.19■■□□□ 1.14
RPAIN-203ENST00000381209 IP6K1Q92551 441 aa22.19■■□□□ 1.14
RPAIN-203ENST00000381209 LAS1LQ9Y4W2 734 aaKnown RBP22.19■■□□□ 1.14
RPAIN-203ENST00000381209 NFAT5O94916 1531 aa22.19■■□□□ 1.14
RPAIN-203ENST00000381209 COG6Q9Y2V7 657 aa22.18■■□□□ 1.14
RPAIN-203ENST00000381209 MST1RQ04912 1400 aa22.18■■□□□ 1.14
RPAIN-203ENST00000381209 TCERG1O14776 1098 aaKnown RBP22.17■■□□□ 1.14
RPAIN-203ENST00000381209 KIF1AQ12756 1690 aa22.17■■□□□ 1.14
RPAIN-203ENST00000381209 MBIPQ9NS73 344 aa22.17■■□□□ 1.14
RPAIN-203ENST00000381209 KIF16BQ96L93 1317 aa22.16■■□□□ 1.14
RPAIN-203ENST00000381209 KRT28Q7Z3Y7 464 aa22.16■■□□□ 1.14
RPAIN-203ENST00000381209 GAS2L2Q8NHY3 880 aa22.16■■□□□ 1.14
RPAIN-203ENST00000381209 CLUAP1Q96AJ1 413 aa22.16■■□□□ 1.14
RPAIN-203ENST00000381209 FAM83GA6ND36 823 aa22.16■■□□□ 1.14
RPAIN-203ENST00000381209 CADPS2Q86UW7 1296 aa22.16■■□□□ 1.14
RPAIN-203ENST00000381209 LMTK3Q96Q04 1460 aa22.15■■□□□ 1.14
RPAIN-203ENST00000381209 USP19O94966 1318 aa22.15■■□□□ 1.14
RPAIN-203ENST00000381209 IPO8O15397 1037 aaKnown RBP22.15■■□□□ 1.14
RPAIN-203ENST00000381209 VAMP4O75379 141 aa22.15■■□□□ 1.14
RPAIN-203ENST00000381209 RLBP1P12271 317 aa22.15■■□□□ 1.14
RPAIN-203ENST00000381209 DZIP1LQ8IYY4 767 aaKnown RBP22.15■■□□□ 1.14
RPAIN-203ENST00000381209 HTATSF1O43719 755 aaKnown RBP22.14■■□□□ 1.13
RPAIN-203ENST00000381209 MTHFSDQ2M296 383 aaKnown RBP22.14■■□□□ 1.13
RPAIN-203ENST00000381209 SLIT3O75094 1523 aa22.14■■□□□ 1.13
RPAIN-203ENST00000381209 DCTN1Q14203 1278 aa22.13■■□□□ 1.13
RPAIN-203ENST00000381209 ATF7IPQ6VMQ6 1270 aa22.13■■□□□ 1.13
RPAIN-203ENST00000381209 GCP02774 474 aa22.12■■□□□ 1.13
RPAIN-203ENST00000381209 MVPQ14764 893 aaKnown RBP22.12■■□□□ 1.13
RPAIN-203ENST00000381209 FTSJ3Q8IY81 847 aaKnown RBP22.12■■□□□ 1.13
RPAIN-203ENST00000381209 CHL1O00533 1208 aa22.11■■□□□ 1.13
RPAIN-203ENST00000381209 NOB1Q9ULX3 412 aaKnown RBP22.11■■□□□ 1.13
RPAIN-203ENST00000381209 TNNQ9UQP3 1299 aa22.11■■□□□ 1.13
RPAIN-203ENST00000381209 TRIM27P14373 513 aa22.11■■□□□ 1.13
RPAIN-203ENST00000381209 HAP1P54257 671 aaPredicted RBP22.11■■□□□ 1.13
RPAIN-203ENST00000381209 XPCQ01831 940 aaPredicted RBP22.11■■□□□ 1.13
RPAIN-203ENST00000381209 ARHGEF25Q86VW2 580 aa22.11■■□□□ 1.13
RPAIN-203ENST00000381209 RTF1Q92541 710 aaKnown RBP22.11■■□□□ 1.13
RPAIN-203ENST00000381209 MSH6P52701 1360 aa22.1■■□□□ 1.13
RPAIN-203ENST00000381209 PHRF1Q9P1Y6 1649 aaKnown RBP22.09■■□□□ 1.13
RPAIN-203ENST00000381209 CRB1P82279 1406 aa22.09■■□□□ 1.13
RPAIN-203ENST00000381209 TWISTNBQ3B726 338 aaPredicted RBP22.09■■□□□ 1.13
RPAIN-203ENST00000381209 MCM10Q7L590 875 aa22.09■■□□□ 1.13
RPAIN-203ENST00000381209 ARHGAP45Q92619 1136 aa22.09■■□□□ 1.13
RPAIN-203ENST00000381209 STRCP1A6NGW2 1772 aa22.09■■□□□ 1.13
RPAIN-203ENST00000381209 TRPM3Q9HCF6 1732 aaPredicted RBP22.09■■□□□ 1.13
RPAIN-203ENST00000381209 MRPL50Q8N5N7 158 aaKnown RBP22.08■■□□□ 1.13
RPAIN-203ENST00000381209 TSPYL6Q8N831 410 aa22.08■■□□□ 1.13
RPAIN-203ENST00000381209 LTV1Q96GA3 475 aaPredicted RBP22.08■■□□□ 1.13
RPAIN-203ENST00000381209 KIAA0232Q92628 1395 aa22.07■■□□□ 1.12
RPAIN-203ENST00000381209 DLG5Q8TDM6 1919 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms