RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 ABCC11Q96J66 1382 aa13.6□□□□□ -0.23
NPC1L1-202ENST00000381160 MYO5CQ9NQX4 1742 aa13.6□□□□□ -0.23
NPC1L1-202ENST00000381160 CCDC94Q9BW85 323 aaPredicted RBP13.6□□□□□ -0.23
NPC1L1-202ENST00000381160 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.6□□□□□ -0.23
NPC1L1-202ENST00000381160 KDM5AP29375 1690 aaKnown RBP13.6□□□□□ -0.23
NPC1L1-202ENST00000381160 PLXNC1O60486 1568 aa13.59□□□□□ -0.23
NPC1L1-202ENST00000381160 MCM5P33992 734 aa13.59□□□□□ -0.23
NPC1L1-202ENST00000381160 PPP4R3BQ5MIZ7 849 aa13.59□□□□□ -0.23
NPC1L1-202ENST00000381160 TRIM6-TRIM34B2RNG4 842 aa13.59□□□□□ -0.23
NPC1L1-202ENST00000381160 PTPRTO14522 1441 aa13.59□□□□□ -0.23
NPC1L1-202ENST00000381160 ALDH1L2Q3SY69 923 aa13.59□□□□□ -0.23
NPC1L1-202ENST00000381160 PLEKHM2Q8IWE5 1019 aa13.59□□□□□ -0.23
NPC1L1-202ENST00000381160 MINK1Q8N4C8 1332 aaPredicted RBP13.59□□□□□ -0.23
NPC1L1-202ENST00000381160 PHF14O94880 888 aa13.58□□□□□ -0.23
NPC1L1-202ENST00000381160 TWISTNBQ3B726 338 aaPredicted RBP13.58□□□□□ -0.23
NPC1L1-202ENST00000381160 USP26Q9BXU7 913 aa13.58□□□□□ -0.23
NPC1L1-202ENST00000381160 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
NPC1L1-202ENST00000381160 TTC22Q5TAA0 569 aa13.58□□□□□ -0.24
NPC1L1-202ENST00000381160 SLC4A10Q6U841 1118 aa13.58□□□□□ -0.24
NPC1L1-202ENST00000381160 RILPL2Q969X0 211 aa13.58□□□□□ -0.24
NPC1L1-202ENST00000381160 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.24
NPC1L1-202ENST00000381160 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
NPC1L1-202ENST00000381160 PDLIM2Q96JY6 352 aa13.58□□□□□ -0.24
NPC1L1-202ENST00000381160 DUOX2Q9NRD8 1548 aa13.57□□□□□ -0.24
NPC1L1-202ENST00000381160 MAST1Q9Y2H9 1570 aa13.57□□□□□ -0.24
NPC1L1-202ENST00000381160 SDSP20132 328 aa13.57□□□□□ -0.24
NPC1L1-202ENST00000381160 MCCP23508 829 aa13.57□□□□□ -0.24
NPC1L1-202ENST00000381160 KIF3AQ9Y496 699 aa13.57□□□□□ -0.24
NPC1L1-202ENST00000381160 SPC24Q8NBT2 197 aa13.57□□□□□ -0.24
NPC1L1-202ENST00000381160 API5Q9BZZ5 524 aaKnown RBP13.57□□□□□ -0.24
NPC1L1-202ENST00000381160 HMGN5P82970 282 aaKnown RBP13.56□□□□□ -0.24
NPC1L1-202ENST00000381160 TSHZ3Q63HK5 1081 aa13.56□□□□□ -0.24
NPC1L1-202ENST00000381160 SIRT2Q8IXJ6 389 aa13.56□□□□□ -0.24
NPC1L1-202ENST00000381160 AK9Q5TCS8 1911 aa13.56□□□□□ -0.24
NPC1L1-202ENST00000381160 UPF3BQ9BZI7 483 aaKnown RBP13.56□□□□□ -0.24
NPC1L1-202ENST00000381160 TERF2IPQ9NYB0 399 aa13.56□□□□□ -0.24
NPC1L1-202ENST00000381160 ZNF518AQ6AHZ1 1483 aa13.56□□□□□ -0.24
NPC1L1-202ENST00000381160 NOLC1Q14978 699 aaKnown RBP eCLIP13.55□□□□□ -0.24
NPC1L1-202ENST00000381160 CHMP3Q9Y3E7 222 aa13.55□□□□□ -0.24
NPC1L1-202ENST00000381160 MADDQ8WXG6 1647 aa13.55□□□□□ -0.24
NPC1L1-202ENST00000381160 NOS1P29475 1434 aa13.55□□□□□ -0.24
NPC1L1-202ENST00000381160 ERC2O15083 957 aa13.55□□□□□ -0.24
NPC1L1-202ENST00000381160 TMX3Q96JJ7 454 aa13.55□□□□□ -0.24
NPC1L1-202ENST00000381160 NAP1L2Q9ULW6 460 aaPredicted RBP13.55□□□□□ -0.24
NPC1L1-202ENST00000381160 TRAPPC8Q9Y2L5 1435 aa13.55□□□□□ -0.24
NPC1L1-202ENST00000381160 ZNF771Q7L3S4 317 aaPredicted RBP13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 ABCA8O94911 1581 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 ADCY5O95622 1261 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 HCLS1P14317 486 aaPredicted RBP13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 GNAI1P63096 354 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 ATP10AO60312 1499 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 DCTN1Q14203 1278 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 HDGFL2Q7Z4V5 671 aaPredicted RBP13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 PDCL2Q8N4E4 241 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 MYRIPQ8NFW9 859 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 VAMP4O75379 141 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 CLEC17AQ6ZS10 378 aa13.54□□□□□ -0.24
NPC1L1-202ENST00000381160 ZDHHC9Q9Y397 364 aa13.53□□□□□ -0.24
NPC1L1-202ENST00000381160 IL16Q14005 1332 aa13.53□□□□□ -0.24
NPC1L1-202ENST00000381160 IQSEC2Q5JU85 1478 aa13.53□□□□□ -0.24
NPC1L1-202ENST00000381160 FIBPO43427 364 aa13.53□□□□□ -0.24
NPC1L1-202ENST00000381160 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.24
NPC1L1-202ENST00000381160 TTC37Q6PGP7 1564 aa13.52□□□□□ -0.24
NPC1L1-202ENST00000381160 CD109Q6YHK3 1445 aa13.52□□□□□ -0.25
NPC1L1-202ENST00000381160 UNC13BO14795 1591 aa13.52□□□□□ -0.25
NPC1L1-202ENST00000381160 LARP6Q9BRS8 491 aaKnown RBP13.52□□□□□ -0.25
NPC1L1-202ENST00000381160 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
NPC1L1-202ENST00000381160 PHACTR3Q96KR7 559 aa13.51□□□□□ -0.25
NPC1L1-202ENST00000381160 MBIPQ9NS73 344 aa13.51□□□□□ -0.25
NPC1L1-202ENST00000381160 IQGAP3Q86VI3 1631 aa13.51□□□□□ -0.25
NPC1L1-202ENST00000381160 FAM83GA6ND36 823 aa13.51□□□□□ -0.25
NPC1L1-202ENST00000381160 DTNBO60941 627 aa13.51□□□□□ -0.25
NPC1L1-202ENST00000381160 C8orf58Q8NAV2 365 aa13.51□□□□□ -0.25
NPC1L1-202ENST00000381160 UGGT1Q9NYU2 1555 aa13.51□□□□□ -0.25
NPC1L1-202ENST00000381160 RNF17Q9BXT8 1623 aaKnown RBP13.51□□□□□ -0.25
NPC1L1-202ENST00000381160 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.5□□□□□ -0.25
NPC1L1-202ENST00000381160 PRIMPOLQ96LW4 560 aa13.5□□□□□ -0.25
NPC1L1-202ENST00000381160 CYP2E1P05181 493 aaPredicted RBP13.5□□□□□ -0.25
NPC1L1-202ENST00000381160 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
NPC1L1-202ENST00000381160 IQGAP1P46940 1657 aa13.5□□□□□ -0.25
NPC1L1-202ENST00000381160 FCHSD2O94868 740 aa13.5□□□□□ -0.25
NPC1L1-202ENST00000381160 DMTNQ08495 405 aa13.5□□□□□ -0.25
NPC1L1-202ENST00000381160 FYB1O15117 783 aa13.49□□□□□ -0.25
NPC1L1-202ENST00000381160 HMMRO75330 724 aa13.49□□□□□ -0.25
NPC1L1-202ENST00000381160 DCTPP1Q9H773 170 aa13.49□□□□□ -0.25
NPC1L1-202ENST00000381160 DIAPH3Q9NSV4 1193 aa13.49□□□□□ -0.25
NPC1L1-202ENST00000381160 EXOC6BQ9Y2D4 811 aa13.49□□□□□ -0.25
NPC1L1-202ENST00000381160 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
NPC1L1-202ENST00000381160 ZNF592Q92610 1267 aa13.49□□□□□ -0.25
NPC1L1-202ENST00000381160 ZNF428Q96B54 188 aa13.49□□□□□ -0.25
NPC1L1-202ENST00000381160 C14orf93Q9H972 538 aaKnown RBP13.49□□□□□ -0.25
NPC1L1-202ENST00000381160 ANKRD36BQ8N2N9 1353 aa13.49□□□□□ -0.25
NPC1L1-202ENST00000381160 U2AF2P26368 475 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■■■□□ 18.4
NPC1L1-202ENST00000381160 PIBF1Q8WXW3 757 aa13.48□□□□□ -0.25
NPC1L1-202ENST00000381160 MYOM1P52179 1685 aa13.48□□□□□ -0.25
NPC1L1-202ENST00000381160 SOX12O15370 315 aa13.48□□□□□ -0.25
NPC1L1-202ENST00000381160 KRT24Q2M2I5 525 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms